You are here

Home

ASPNIDRAFT_120610-T1, ASPNIDRAFT_120610-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_120610-T1
Unique NameASPNIDRAFT_120610-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:2975769..2977552-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_120610-T1 ID=ASPNIDRAFT_120610-T1|Name=ASPNIDRAFT_120610-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1784bp|location=Sequence derived from alignment at ACJE01000004.1:2975769..2977552- (Aspergillus niger ATCC 1015)
GAGCCTCCCCAACGGACAAACCGACACAGTATATACGATGTATACGAGAA
GGCCAAAGAAAGGCGCATCGCCCTGCAGAGAAAGTACTGGGTGCAGGTCC
TCTTCGAATACACAGTATATATTTTCCTTGCAGCCTTCATCTACTTCGTC
CTGATTGGGATGCCCCTCTGGCGAGGTGCCGTGTGGTGGCTCTACTACGT
AGTGCGTACCAAGTTTGTCATTCCAGGTGGCTGGGGAATCACAATTGGCA
TTGCTATTCTGTAGGTATCGCTCATCGTCTTTACGACAAGAGACTAATGA
CTTACTCCAAAGCTACGCGTTTACTCCCTTGCTACTGCTCTTCGAGAAGA
ACCCTCCCCCTGTGGACAGCAATTCAAAAGAGGGCGACCTCGAGGGCAAT
CGAAACACAGCGAAAAGTACAGCCCTTCTCATTCCCTGCTATAAATCTGC
CAACATTATTGGCCCGACACTCGACGCGGCGCTACACATCTTTCCGCCTG
AAAACATTTTCGTCATTGCGAACGGCAACTCCCCAGAGCCATTAGACAAT
ACTGAAGAAGTGTGCCGCCCATACGGCGTAAACCACCTTTGGTGTCCAGT
TGGAAGCAAGATTATCGCCCAGTTTGTTGGTTGCTACGCGGCTAAAGAGT
TTCCCCATGTTCTCCTGATCGACGACGACTGCGCACTGCCTCCGAACTTT
CCTGTCGTTAGTGACCGACTCAAAGGCCGTGTACAATGTATCGGATATAC
CATTAAGAGTGTTGGGCCCGAGTCCTCACGCGGCACCTTATGCCAGCAGG
CACAGGACCTCGAGTACAAGATATCAGGCCTTCAGCGTGCATTCGCCGGT
CTTTTAGGCAGCGCAACATTCCCGCACGGAGCCATCTCTCTATGGAAGAC
CGACTTCCTCAAGCAGACCTTCCATGACCATCCAGGATTCTCTGTGTCTG
AAGATTGGTTTTTCGGAGATAGCTGTCGTCGGCTAGGCGGGCGTATCAAG
ATGTGCTCTGCTGTTTTTGTTGAGACAGAGACCCCGTCCGCCGTTTTCTT
CAGTTCAGGCGGCTCACGAGGAGGATTCGGCGAGATGACCATCTTCAAAC
AGAGATTTATGCGCTGGAACTTCTTCTTCGTCAACGGCATGTGGTACAAT
ATGAAATATATCTTATGCAGCTGGAATCTCGGTTTCTGGGAGCTGGGCGC
GAAGCTGTTTGTTTTTCAAGAGGTAGGTTCTACATCCGCCGAGCTGTGCA
ATGGCACAAACAACAAGACCTTATGCTTACTAAAACCAGGTCTACGAAAC
CCTACTATACCTCCTCGCTCCGTTCGTCCTACCGATCTCGCTCGTGGTCC
AACCAGCATTCTGCGGCATCATGTTGGGCGTCACCAACGGCTTGTACTTT
CTAAACGTCGTCATCTTCAACCTGGTACATCTACGCCTGAAGAAGGAAGC
TGTCTCCTGGAAATGCTTGCTCCTCTACTACATGCCGTATAAAATCGTCC
TTTTCATCATCAACGTCGTCAGCTGCTATTGGTCTCTGTTCAAGTACGCC
CGGTACTTCGCCACGAGACACCCCAAAGTCATCGAGGATGACAAAGCTGT
GGAGGTAGTACTGCGTCTAGAAGATACCACTAATAATGATCCCAAGCCAA
CGAACAAGGCACCGGGTCTTGGTCGGAGTTTCTCCGTGACTAAGGTCAGG
GCTAGGAAGACTAGCAACGCGGGCTCAAAACCGGCCGGGCCTGGAGGTGT
TTCTGTTGCTGGTGCCGAGGGCTCTTGGATTTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:2975769..2977552-

>ASPNIDRAFT_120610-T1 ID=ASPNIDRAFT_120610-T1|Name=ASPNIDRAFT_120610-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=6348bp|location=Sequence derived from alignment at ACJE01000004.1:2975769..2977552- (Aspergillus niger ATCC 1015)
CCAACGAACAAGGCACCGGGTCTTGGTCGGAGTTTCTCCGTGACTAAGGT
CAGGGCTAGGAAGACTAGCAACGCGGGCTCAAAACCGGCCGGGCCTGGAG
GTGTTTCTGTTGCTGGTGCCGAGGGCTCTTGGATTTGAGTCTACGAAACC
CTACTATACCTCCTCGCTCCGTTCGTCCTACCGATCTCGCTCGTGGTCCA
ACCAGCATTCTGCGGCATCATGTTGGGCGTCACCAACGGCTTGTACTTTC
TAAACGTCGTCATCTTCAACCTGGTACATCTACGCCTGAAGAAGGAAGCT
GTCTCCTGGAAATGCTTGCTCCTCTACTACATGCCGTATAAAATCGTCCT
TTTCATCATCAACGTCGTCAGCTGCTATTGGTCTCTGTTCAAGTACGCCC
GGTACTTCGCCACGAGACACCCCAAAGTCATCGAGGATGACAAAGCTGTG
GAGTGCGTACCAAGTTTGTCATTCCAGGTGGCTGGGGAATCACAATTGGC
ATTGCTATTCTGTAGGTATCGCTCATCGTCTTTACGACAAGAGACTAATG
ACTTACTCCAAAGCTACGCGTTTACTCCCTTGCTACTGCTCTTCGAGAAG
AACCCTCCCCCTGTGGACAGCAATTCAAAAGAGGGCGACCTCGAGGGCAA
TCGAAACACAGCGAAAAGTACAGCCCTTCTCATTCCCTGCTATAAATCTG
CCAACATTATTGGCCCGACACTCGACGCGGCGCTACACATCTTTCCGCCT
GAAAACATTTTCGTCATTGCGAACGGCAACTCCCCAGAGCCATTAGACAA
TACTGAAGAAGTGTGCCGCCCATACGGCGTAAACCACCTTTGGTGTCCAG
TTGGAAGCAAGATTATCGCCCAGTTTGTTGGTTGCTACGCGGCTAAAGAG
TTTCCCCATGTTCTCCTGATCGACGACGACTGCGCACTGCCTCCGAACTT
TCCTGTCGTTAGTGACCGACTCAAAGGCCGTGTACAATGTATCGGATATA
CCATTAAGAGTGTTGGGCCCGAGTCCTCACGCGGCACCTTATGCCAGCAG
GCACAGGACCTCGAGTACAAGATATCAGGCCTTCAGCGTGCATTCGCCGG
TCTTTTAGGCAGCGCAACATTCCCGCACGGAGCCATCTCTCTATGGAAGA
CCGACTTCCTCAAGCAGACCTTCCATGACCATCCAGGATTCTCTGTGTCT
GAAGATTGGTTTTTCGGAGATAGCTGTCGTCGGCTAGGCGGGCGTATCAA
GATGTGCTCTGCTGTTTTTGTTGAGACAGAGACCCCGTCCGCCGTTTTCT
TCAGTTCAGGCGGCTCACGAGGAGGATTCGGCGAGATGACCATCTTCAAA
CAGAGATTTATGCGCTGGAACTTCTTCTTCGTCAACGGCATGTGGTACAA
TATGAAATATATCTTATGCAGCTGGAATCTCGGTTTCTGGGAGCTGGGCG
CGAAGCTGTTTGTTTTTCAAGAGGAGCCTCCCCAACGGACAAACCGACAC
AGTATATACGATGTATACGAGAAGGCCAAAGAAAGGCGCATCGCCCTGCA
GAGAAAGTACTGGGTGCAGGTCCTCTTCGAATACACACCAACGAACAAGG
CACCGGGTCTTGGTCGGAGTTTCTCCGTGACTAAGGTCAGGGCTAGGAAG
ACTAGCAACGCGGGCTCAAAACCGGCCGGGCCTGGAGGTGTTTCTGTTGC
TGGTGCCGAGGGCTCTTGGATTTGAGTCTACGAAACCCTACTATACCTCC
TCGCTCCGTTCGTCCTACCGATCTCGCTCGTGGTCCAACCAGCATTCTGC
GGCATCATGTTGGGCGTCACCAACGGCTTGTACTTTCTAAACGTCGTCAT
CTTCAACCTGGTACATCTACGCCTGAAGAAGGAAGCTGTCTCCTGGAAAT
GCTTGCTCCTCTACTACATGCCGTATAAAATCGTCCTTTTCATCATCAAC
GTCGTCAGCTGCTATTGGTCTCTGTTCAAGTACGCCCGGTACTTCGCCAC
GAGACACCCCAAAGTCATCGAGGATGACAAAGCTGTGGAGTGCGTACCAA
GTTTGTCATTCCAGGTGGCTGGGGAATCACAATTGGCATTGCTATTCTGT
AGGTATCGCTCATCGTCTTTACGACAAGAGACTAATGACTTACTCCAAAG
CTACGCGTTTACTCCCTTGCTACTGCTCTTCGAGAAGAACCCTCCCCCTG
TGGACAGCAATTCAAAAGAGGGCGACCTCGAGGGCAATCGAAACACAGCG
AAAAGTACAGCCCTTCTCATTCCCTGCTATAAATCTGCCAACATTATTGG
CCCGACACTCGACGCGGCGCTACACATCTTTCCGCCTGAAAACATTTTCG
TCATTGCGAACGGCAACTCCCCAGAGCCATTAGACAATACTGAAGAAGTG
TGCCGCCCATACGGCGTAAACCACCTTTGGTGTCCAGTTGGAAGCAAGAT
TATCGCCCAGTTTGTTGGTTGCTACGCGGCTAAAGAGTTTCCCCATGTTC
TCCTGATCGACGACGACTGCGCACTGCCTCCGAACTTTCCTGTCGTTAGT
GACCGACTCAAAGGCCGTGTACAATGTATCGGATATACCATTAAGAGTGT
TGGGCCCGAGTCCTCACGCGGCACCTTATGCCAGCAGGCACAGGACCTCG
AGTACAAGATATCAGGCCTTCAGCGTGCATTCGCCGGTCTTTTAGGCAGC
GCAACATTCCCGCACGGAGCCATCTCTCTATGGAAGACCGACTTCCTCAA
GCAGACCTTCCATGACCATCCAGGATTCTCTGTGTCTGAAGATTGGTTTT
TCGGAGATAGCTGTCGTCGGCTAGGCGGGCGTATCAAGATGTGCTCTGCT
GTTTTTGTTGAGACAGAGACCCCGTCCGCCGTTTTCTTCAGTTCAGGCGG
CTCACGAGGAGGATTCGGCGAGATGACCATCTTCAAACAGAGATTTATGC
GCTGGAACTTCTTCTTCGTCAACGGCATGTGGTACAATATGAAATATATC
TTATGCAGCTGGAATCTCGGTTTCTGGGAGCTGGGCGCGAAGCTGTTTGT
TTTTCAAGAGGAGCCTCCCCAACGGACAAACCGACACAGTATATACGATG
TATACGAGAAGGCCAAAGAAAGGCGCATCGCCCTGCAGAGAAAGTACTGG
GTGCAGGTCCTCTTCGAATACACACCAACGAACAAGGCACCGGGTCTTGG
TCGGAGTTTCTCCGTGACTAAGGTCAGGGCTAGGAAGACTAGCAACGCGG
GCTCAAAACCGGCCGGGCCTGGAGGTGTTTCTGTTGCTGGTGCCGAGGGC
TCTTGGATTTGAGTCTACGAAACCCTACTATACCTCCTCGCTCCGTTCGT
CCTACCGATCTCGCTCGTGGTCCAACCAGCATTCTGCGGCATCATGTTGG
GCGTCACCAACGGCTTGTACTTTCTAAACGTCGTCATCTTCAACCTGGTA
CATCTACGCCTGAAGAAGGAAGCTGTCTCCTGGAAATGCTTGCTCCTCTA
CTACATGCCGTATAAAATCGTCCTTTTCATCATCAACGTCGTCAGCTGCT
ATTGGTCTCTGTTCAAGTACGCCCGGTACTTCGCCACGAGACACCCCAAA
GTCATCGAGGATGACAAAGCTGTGGAGTGCGTACCAAGTTTGTCATTCCA
GGTGGCTGGGGAATCACAATTGGCATTGCTATTCTGTAGGTATCGCTCAT
CGTCTTTACGACAAGAGACTAATGACTTACTCCAAAGCTACGCGTTTACT
CCCTTGCTACTGCTCTTCGAGAAGAACCCTCCCCCTGTGGACAGCAATTC
AAAAGAGGGCGACCTCGAGGGCAATCGAAACACAGCGAAAAGTACAGCCC
TTCTCATTCCCTGCTATAAATCTGCCAACATTATTGGCCCGACACTCGAC
GCGGCGCTACACATCTTTCCGCCTGAAAACATTTTCGTCATTGCGAACGG
CAACTCCCCAGAGCCATTAGACAATACTGAAGAAGTGTGCCGCCCATACG
GCGTAAACCACCTTTGGTGTCCAGTTGGAAGCAAGATTATCGCCCAGTTT
GTTGGTTGCTACGCGGCTAAAGAGTTTCCCCATGTTCTCCTGATCGACGA
CGACTGCGCACTGCCTCCGAACTTTCCTGTCGTTAGTGACCGACTCAAAG
GCCGTGTACAATGTATCGGATATACCATTAAGAGTGTTGGGCCCGAGTCC
TCACGCGGCACCTTATGCCAGCAGGCACAGGACCTCGAGTACAAGATATC
AGGCCTTCAGCGTGCATTCGCCGGTCTTTTAGGCAGCGCAACATTCCCGC
ACGGAGCCATCTCTCTATGGAAGACCGACTTCCTCAAGCAGACCTTCCAT
GACCATCCAGGATTCTCTGTGTCTGAAGATTGGTTTTTCGGAGATAGCTG
TCGTCGGCTAGGCGGGCGTATCAAGATGTGCTCTGCTGTTTTTGTTGAGA
CAGAGACCCCGTCCGCCGTTTTCTTCAGTTCAGGCGGCTCACGAGGAGGA
TTCGGCGAGATGACCATCTTCAAACAGAGATTTATGCGCTGGAACTTCTT
CTTCGTCAACGGCATGTGGTACAATATGAAATATATCTTATGCAGCTGGA
ATCTCGGTTTCTGGGAGCTGGGCGCGAAGCTGTTTGTTTTTCAAGAGGAG
CCTCCCCAACGGACAAACCGACACAGTATATACGATGTATACGAGAAGGC
CAAAGAAAGGCGCATCGCCCTGCAGAGAAAGTACTGGGTGCAGGTCCTCT
TCGAATACACACCAACGAACAAGGCACCGGGTCTTGGTCGGAGTTTCTCC
GTGACTAAGGTCAGGGCTAGGAAGACTAGCAACGCGGGCTCAAAACCGGC
CGGGCCTGGAGGTGTTTCTGTTGCTGGTGCCGAGGGCTCTTGGATTTGAG
TCTACGAAACCCTACTATACCTCCTCGCTCCGTTCGTCCTACCGATCTCG
CTCGTGGTCCAACCAGCATTCTGCGGCATCATGTTGGGCGTCACCAACGG
CTTGTACTTTCTAAACGTCGTCATCTTCAACCTGGTACATCTACGCCTGA
AGAAGGAAGCTGTCTCCTGGAAATGCTTGCTCCTCTACTACATGCCGTAT
AAAATCGTCCTTTTCATCATCAACGTCGTCAGCTGCTATTGGTCTCTGTT
CAAGTACGCCCGGTACTTCGCCACGAGACACCCCAAAGTCATCGAGGATG
ACAAAGCTGTGGAGTGCGTACCAAGTTTGTCATTCCAGGTGGCTGGGGAA
TCACAATTGGCATTGCTATTCTGTAGGTATCGCTCATCGTCTTTACGACA
AGAGACTAATGACTTACTCCAAAGCTACGCGTTTACTCCCTTGCTACTGC
TCTTCGAGAAGAACCCTCCCCCTGTGGACAGCAATTCAAAAGAGGGCGAC
CTCGAGGGCAATCGAAACACAGCGAAAAGTACAGCCCTTCTCATTCCCTG
CTATAAATCTGCCAACATTATTGGCCCGACACTCGACGCGGCGCTACACA
TCTTTCCGCCTGAAAACATTTTCGTCATTGCGAACGGCAACTCCCCAGAG
CCATTAGACAATACTGAAGAAGTGTGCCGCCCATACGGCGTAAACCACCT
TTGGTGTCCAGTTGGAAGCAAGATTATCGCCCAGTTTGTTGGTTGCTACG
CGGCTAAAGAGTTTCCCCATGTTCTCCTGATCGACGACGACTGCGCACTG
CCTCCGAACTTTCCTGTCGTTAGTGACCGACTCAAAGGCCGTGTACAATG
TATCGGATATACCATTAAGAGTGTTGGGCCCGAGTCCTCACGCGGCACCT
TATGCCAGCAGGCACAGGACCTCGAGTACAAGATATCAGGCCTTCAGCGT
GCATTCGCCGGTCTTTTAGGCAGCGCAACATTCCCGCACGGAGCCATCTC
TCTATGGAAGACCGACTTCCTCAAGCAGACCTTCCATGACCATCCAGGAT
TCTCTGTGTCTGAAGATTGGTTTTTCGGAGATAGCTGTCGTCGGCTAGGC
GGGCGTATCAAGATGTGCTCTGCTGTTTTTGTTGAGACAGAGACCCCGTC
CGCCGTTTTCTTCAGTTCAGGCGGCTCACGAGGAGGATTCGGCGAGATGA
CCATCTTCAAACAGAGATTTATGCGCTGGAACTTCTTCTTCGTCAACGGC
ATGTGGTACAATATGAAATATATCTTATGCAGCTGGAATCTCGGTTTCTG
GGAGCTGGGCGCGAAGCTGTTTGTTTTTCAAGAGGAGCCTCCCCAACGGA
CAAACCGACACAGTATATACGATGTATACGAGAAGGCCAAAGAAAGGCGC
ATCGCCCTGCAGAGAAAGTACTGGGTGCAGGTCCTCTTCGAATACACA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_120610ASPNIDRAFT_120610Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_120610-T1ASPNIDRAFT_120610-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_120610-T1.cdsASPNIDRAFT_120610-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_120610-T1.exon4ASPNIDRAFT_120610-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_120610-T1.exon3ASPNIDRAFT_120610-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_120610-T1.exon2ASPNIDRAFT_120610-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_120610-T1.exon1ASPNIDRAFT_120610-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteCAZy:GT2_Glyco_tranf_2_3
DBxrefInterPro:IPR029044
DBxrefPFAM:PF13632
DBxrefPFAM:PF13641
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:2975769..2977552 -
Powered by Drupal