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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000017.1:250237..252118+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_121560-T1 ID=ASPNIDRAFT_121560-T1|Name=ASPNIDRAFT_121560-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1882bp|location=Sequence derived from alignment at ACJE01000017.1:250237..252118+ (Aspergillus niger ATCC 1015)
ATGGATATATCCGCCCAGACATTCTTCTACCATCTACCCAGAGTGTTGGA
TGACTTGGCATCCTGTTGTTTCGTATCTATAGACTTTGAATTCTCTGGCA
TCGCCAAAGGCCTCGGACCCTCTGCTAAGAGCAGAAGCACCCTACAGGAG
CGCTATGAAGAAGTCAAGAATTCCGCTGATCAATACCAAATCCTACAAGT
CGGCTTGACTATCTGCCATGAGGATCCAGAGACAGGTTAGACACACATGT
CCACCACTCCAGGTTGATGTGTTAATAGCGCAATCACAGCAACGTACACC
TTGAAACCATATAATCTATACTTGAGCCCAATCATCGACCGGAAGCTTGA
TTTAGACAGAAATTGTTCCTTCCAAAGCAGTGGTATGCTCGTTTCAAAGC
TGCCCTCGTCCCGTTAACCTAATAAGATCTACTTAGCCGTCGAGTTCCTC
TTGGAAAACAAGTTTAGCATGGAAGATCTGTACAAGAATGGCGTCACCTA
CTTGTCGAGAGATGAGGAAAGTCGAATAATGGCCAGAGTCATGCAGAGAA
ATGAACGCACGACAGCGCGCAGTTCTCTGGACGTCGGGGACCATGAATAT
GAGTCCTTAGCCTTTTTAAAGGATGTTCGCCGTCTTGTAGATGAATGGCT
GGCGCTTGGTAAAGTAGGAGTTTTGGTCCTCTCTAGTACTGCTTTTCTAA
CCGTTGTTACCAGGCCCGGGAGGATTACCTTAATATCCCGCCACCTCGGC
CTATAACAGGACCTGCTCCATCCAATCACCCCAAGTCTATGCCAACGGAC
CTCAATAGGTTTCAAAAGAGGCTTGTTCATCAGCTCATCGAAGTGGAGTA
TCCGTCTTTGGTGACGGTCAGTAGGCCGGGGTTTATACAGATAATCGACT
ACGACGAACAGCGCGAGAAGGCTGTTCGCGACCAGAGGGTGAAATGGGTA
CAAGAAAGGATCTGGAAACAGACTGGATTCAGATGGATCGCGGAGGCGCT
AGCCGGGGGCGATCTGACCAACCTCGAGCCTTTCTGCTTCATCAATTTGA
TGTCGTCTTCGAAGGAGAACCCCCAAAGTTCTCTTCAGGACTTCTCGCGG
GGGGTGAAGCAGCGGTTGCAGAAGAACAGACCTGTTCTGGTGGGCCATAA
CCTCTTCACGGACCTAATTTACTTTTGTCGGTGCTTCTTCGGGCCTCTCC
CGGACCGTGTGGAGGATTTCCAAGCCATGGCTCATGAGATGTTTCCGGTG
TTGATGGATACGAAGTATATGGCTACACACAACTGTGGCTCCATAAATCC
TAGGTCTTCCCTGCAGGAAATCAATGACAGCCTCGCTAAACAGCCAACAC
CAGCAATAAGTAGGTCGATAGCAATATTGTCGTTCCTCACTAACGTCGAT
CAGGTATACACCCTCAATTTACCAAATACAACACGCGGGCAATCGATCAC
GAAGCTGGCTTTGATAGTTTGCTCACTGCTCAGGTTTTCATTAAACTTTC
TGCCCAGCTCCGAGACAGGGGAACGTCGGGGATTCCGCCAACAGTTCCAG
AAACACCTCAACCCAGTGAAAAGTCGAAGGAGCCCACGAAGCAGGTTATA
GGCGACTTCGAGGCTACCGTCATTCTACCTAGAGGTCCCAAGTCAAACAA
CGTCCGTATTATGTTCGGCTCTATCGAAGTTGAAAGAGTCGTCCAAGACA
ACGGCGGTAGTGATGCTGGCGAGGTAACCAGAATATCCTTAACACCCCGC
GACTCTCCTGAGACACAGAAGAAAGCCGACGAGGGCCGGTTGATTCCACG
CTTAGGCGCGCAATTTTGGAACATTTATGGAAACAAGCTGCGCGTCTTTG
GCACGAATGAAAGGGTATGTCACATTGGCTAG back to topCoding sequence (CDS) from alignment at ACJE01000017.1:250237..252118+ >ASPNIDRAFT_121560-T1 ID=ASPNIDRAFT_121560-T1|Name=ASPNIDRAFT_121560-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=8400bp|location=Sequence derived from alignment at ACJE01000017.1:250237..252118+ (Aspergillus niger ATCC 1015)
ATGGATATATCCGCCCAGACATTCTTCTACCATCTACCCAGAGTGTTGGA
TGACTTGGCATCCTGTTGTTTCGTATCTATAGACTTTGAATTCTCTGGCA
TCGCCAAAGGCCTCGGACCCTCTGCTAAGAGCAGAAGCACCCTACAGGAG
CGCTATGAAGAAGTCAAGAATTCCGCTGATCAATACCAAATCCTACAAGT
CGGCTTGACTATCTGCCATGAGGATCCAGAGACAGCAACGTACACCTTGA
AACCATATAATCTATACTTGAGCCCAATCATCGACCGGAAGCTTGATTTA
GACAGAAATTGTTCCTTCCAAAGCAGTGCCGTCGAGTTCCTCTTGGAAAA
CAAGTTTAGCATGGAAGATCTGTACAAGAATGGCGTCACCTACTTGTCGA
GAGATGAGGAAAGTCGAATAATGGCCAGAGTCATGCAGAGAAATGAACGC
ACGACAGCGCGCAGTTCTCTGGACGTCGGGGACCATGAATATGAGTCCTT
AGCCTTTTTAAAGGATGTTCGCCGTCTTGTAGATGAATGGCTGGCGCTTG
GTAAAGCCCGGGAGGATTACCTTAATATCCCGCCACCTCGGCCTATAACA
GGACCTGCTCCATCCAATCACCCCAAGTCTATGCCAACGGACCTCAATAG
GTTTCAAAAGAGGCTTGTTCATCAGCTCATCGAAGTGGAGTATCCGTCTT
TGGTGACGGTCAGTAGGCCGGGGTTTATACAGATAATCGACTACGACGAA
CAGCGCGAGAAGGCTGTTCGCGACCAGAGGGTGAAATGGGTACAAGAAAG
GATCTGGAAACAGACTGGATTCAGATGGATCGCGGAGGCGCTAGCCGGGG
GCGATCTGACCAACCTCGAGCCTTTCTGCTTCATCAATTTGATGTCGTCT
TCGAAGGAGAACCCCCAAAGTTCTCTTCAGGACTTCTCGCGGGGGGTGAA
GCAGCGGTTGCAGAAGAACAGACCTGTTCTGGTGGGCCATAACCTCTTCA
CGGACCTAATTTACTTTTGTCGGTGCTTCTTCGGGCCTCTCCCGGACCGT
GTGGAGGATTTCCAAGCCATGGCTCATGAGATGTTTCCGGTGTTGATGGA
TACGAAGTATATGGCTACACACAACTGTGGCTCCATAAATCCTAGGTCTT
CCCTGCAGGAAATCAATGACAGCCTCGCTAAACAGCCAACACCAGCAATA
AGTATACACCCTCAATTTACCAAATACAACACGCGGGCAATCGATCACGA
AGCTGGCTTTGATAGTTTGCTCACTGCTCAGGTTTTCATTAAACTTTCTG
CCCAGCTCCGAGACAGGGGAACGTCGGGGATTCCGCCAACAGTTCCAGAA
ACACCTCAACCCAGTGAAAAGTCGAAGGAGCCCACGAAGCAGGTTATAGG
CGACTTCGAGGCTACCGTCATTCTACCTAGAGGTCCCAAGTCAAACAACG
TCCGTATTATGTTCGGCTCTATCGAAGTTGAAAGAGTCGTCCAAGACAAC
GGCGGTAGTGATGCTGGCGAGGTAACCAGAATATCCTTAACACCCCGCGA
CTCTCCTGAGACACAGAAGAAAGCCGACGAGGGCCGGTTGATTCCACGCT
TAGGCGCGCAATTTTGGAACATTTATGGAAACAAGCTGCGCGTCTTTGGC
ACGAATGAAAGGGTATGTCACATTGGCTAGATGGATATATCCGCCCAGAC
ATTCTTCTACCATCTACCCAGAGTGTTGGATGACTTGGCATCCTGTTGTT
TCGTATCTATAGACTTTGAATTCTCTGGCATCGCCAAAGGCCTCGGACCC
TCTGCTAAGAGCAGAAGCACCCTACAGGAGCGCTATGAAGAAGTCAAGAA
TTCCGCTGATCAATACCAAATCCTACAAGTCGGCTTGACTATCTGCCATG
AGGATCCAGAGACAGCAACGTACACCTTGAAACCATATAATCTATACTTG
AGCCCAATCATCGACCGGAAGCTTGATTTAGACAGAAATTGTTCCTTCCA
AAGCAGTGCCGTCGAGTTCCTCTTGGAAAACAAGTTTAGCATGGAAGATC
TGTACAAGAATGGCGTCACCTACTTGTCGAGAGATGAGGAAAGTCGAATA
ATGGCCAGAGTCATGCAGAGAAATGAACGCACGACAGCGCGCAGTTCTCT
GGACGTCGGGGACCATGAATATGAGTCCTTAGCCTTTTTAAAGGATGTTC
GCCGTCTTGTAGATGAATGGCTGGCGCTTGGTAAAGCCCGGGAGGATTAC
CTTAATATCCCGCCACCTCGGCCTATAACAGGACCTGCTCCATCCAATCA
CCCCAAGTCTATGCCAACGGACCTCAATAGGTTTCAAAAGAGGCTTGTTC
ATCAGCTCATCGAAGTGGAGTATCCGTCTTTGGTGACGGTCAGTAGGCCG
GGGTTTATACAGATAATCGACTACGACGAACAGCGCGAGAAGGCTGTTCG
CGACCAGAGGGTGAAATGGGTACAAGAAAGGATCTGGAAACAGACTGGAT
TCAGATGGATCGCGGAGGCGCTAGCCGGGGGCGATCTGACCAACCTCGAG
CCTTTCTGCTTCATCAATTTGATGTCGTCTTCGAAGGAGAACCCCCAAAG
TTCTCTTCAGGACTTCTCGCGGGGGGTGAAGCAGCGGTTGCAGAAGAACA
GACCTGTTCTGGTGGGCCATAACCTCTTCACGGACCTAATTTACTTTTGT
CGGTGCTTCTTCGGGCCTCTCCCGGACCGTGTGGAGGATTTCCAAGCCAT
GGCTCATGAGATGTTTCCGGTGTTGATGGATACGAAGTATATGGCTACAC
ACAACTGTGGCTCCATAAATCCTAGGTCTTCCCTGCAGGAAATCAATGAC
AGCCTCGCTAAACAGCCAACACCAGCAATAAGTATACACCCTCAATTTAC
CAAATACAACACGCGGGCAATCGATCACGAAGCTGGCTTTGATAGTTTGC
TCACTGCTCAGGTTTTCATTAAACTTTCTGCCCAGCTCCGAGACAGGGGA
ACGTCGGGGATTCCGCCAACAGTTCCAGAAACACCTCAACCCAGTGAAAA
GTCGAAGGAGCCCACGAAGCAGGTTATAGGCGACTTCGAGGCTACCGTCA
TTCTACCTAGAGGTCCCAAGTCAAACAACGTCCGTATTATGTTCGGCTCT
ATCGAAGTTGAAAGAGTCGTCCAAGACAACGGCGGTAGTGATGCTGGCGA
GGTAACCAGAATATCCTTAACACCCCGCGACTCTCCTGAGACACAGAAGA
AAGCCGACGAGGGCCGGTTGATTCCACGCTTAGGCGCGCAATTTTGGAAC
ATTTATGGAAACAAGCTGCGCGTCTTTGGCACGAATGAAAGGGTATGTCA
CATTGGCTAGATGGATATATCCGCCCAGACATTCTTCTACCATCTACCCA
GAGTGTTGGATGACTTGGCATCCTGTTGTTTCGTATCTATAGACTTTGAA
TTCTCTGGCATCGCCAAAGGCCTCGGACCCTCTGCTAAGAGCAGAAGCAC
CCTACAGGAGCGCTATGAAGAAGTCAAGAATTCCGCTGATCAATACCAAA
TCCTACAAGTCGGCTTGACTATCTGCCATGAGGATCCAGAGACAGCAACG
TACACCTTGAAACCATATAATCTATACTTGAGCCCAATCATCGACCGGAA
GCTTGATTTAGACAGAAATTGTTCCTTCCAAAGCAGTGCCGTCGAGTTCC
TCTTGGAAAACAAGTTTAGCATGGAAGATCTGTACAAGAATGGCGTCACC
TACTTGTCGAGAGATGAGGAAAGTCGAATAATGGCCAGAGTCATGCAGAG
AAATGAACGCACGACAGCGCGCAGTTCTCTGGACGTCGGGGACCATGAAT
ATGAGTCCTTAGCCTTTTTAAAGGATGTTCGCCGTCTTGTAGATGAATGG
CTGGCGCTTGGTAAAGCCCGGGAGGATTACCTTAATATCCCGCCACCTCG
GCCTATAACAGGACCTGCTCCATCCAATCACCCCAAGTCTATGCCAACGG
ACCTCAATAGGTTTCAAAAGAGGCTTGTTCATCAGCTCATCGAAGTGGAG
TATCCGTCTTTGGTGACGGTCAGTAGGCCGGGGTTTATACAGATAATCGA
CTACGACGAACAGCGCGAGAAGGCTGTTCGCGACCAGAGGGTGAAATGGG
TACAAGAAAGGATCTGGAAACAGACTGGATTCAGATGGATCGCGGAGGCG
CTAGCCGGGGGCGATCTGACCAACCTCGAGCCTTTCTGCTTCATCAATTT
GATGTCGTCTTCGAAGGAGAACCCCCAAAGTTCTCTTCAGGACTTCTCGC
GGGGGGTGAAGCAGCGGTTGCAGAAGAACAGACCTGTTCTGGTGGGCCAT
AACCTCTTCACGGACCTAATTTACTTTTGTCGGTGCTTCTTCGGGCCTCT
CCCGGACCGTGTGGAGGATTTCCAAGCCATGGCTCATGAGATGTTTCCGG
TGTTGATGGATACGAAGTATATGGCTACACACAACTGTGGCTCCATAAAT
CCTAGGTCTTCCCTGCAGGAAATCAATGACAGCCTCGCTAAACAGCCAAC
ACCAGCAATAAGTATACACCCTCAATTTACCAAATACAACACGCGGGCAA
TCGATCACGAAGCTGGCTTTGATAGTTTGCTCACTGCTCAGGTTTTCATT
AAACTTTCTGCCCAGCTCCGAGACAGGGGAACGTCGGGGATTCCGCCAAC
AGTTCCAGAAACACCTCAACCCAGTGAAAAGTCGAAGGAGCCCACGAAGC
AGGTTATAGGCGACTTCGAGGCTACCGTCATTCTACCTAGAGGTCCCAAG
TCAAACAACGTCCGTATTATGTTCGGCTCTATCGAAGTTGAAAGAGTCGT
CCAAGACAACGGCGGTAGTGATGCTGGCGAGGTAACCAGAATATCCTTAA
CACCCCGCGACTCTCCTGAGACACAGAAGAAAGCCGACGAGGGCCGGTTG
ATTCCACGCTTAGGCGCGCAATTTTGGAACATTTATGGAAACAAGCTGCG
CGTCTTTGGCACGAATGAAAGGGTATGTCACATTGGCTAGATGGATATAT
CCGCCCAGACATTCTTCTACCATCTACCCAGAGTGTTGGATGACTTGGCA
TCCTGTTGTTTCGTATCTATAGACTTTGAATTCTCTGGCATCGCCAAAGG
CCTCGGACCCTCTGCTAAGAGCAGAAGCACCCTACAGGAGCGCTATGAAG
AAGTCAAGAATTCCGCTGATCAATACCAAATCCTACAAGTCGGCTTGACT
ATCTGCCATGAGGATCCAGAGACAGCAACGTACACCTTGAAACCATATAA
TCTATACTTGAGCCCAATCATCGACCGGAAGCTTGATTTAGACAGAAATT
GTTCCTTCCAAAGCAGTGCCGTCGAGTTCCTCTTGGAAAACAAGTTTAGC
ATGGAAGATCTGTACAAGAATGGCGTCACCTACTTGTCGAGAGATGAGGA
AAGTCGAATAATGGCCAGAGTCATGCAGAGAAATGAACGCACGACAGCGC
GCAGTTCTCTGGACGTCGGGGACCATGAATATGAGTCCTTAGCCTTTTTA
AAGGATGTTCGCCGTCTTGTAGATGAATGGCTGGCGCTTGGTAAAGCCCG
GGAGGATTACCTTAATATCCCGCCACCTCGGCCTATAACAGGACCTGCTC
CATCCAATCACCCCAAGTCTATGCCAACGGACCTCAATAGGTTTCAAAAG
AGGCTTGTTCATCAGCTCATCGAAGTGGAGTATCCGTCTTTGGTGACGGT
CAGTAGGCCGGGGTTTATACAGATAATCGACTACGACGAACAGCGCGAGA
AGGCTGTTCGCGACCAGAGGGTGAAATGGGTACAAGAAAGGATCTGGAAA
CAGACTGGATTCAGATGGATCGCGGAGGCGCTAGCCGGGGGCGATCTGAC
CAACCTCGAGCCTTTCTGCTTCATCAATTTGATGTCGTCTTCGAAGGAGA
ACCCCCAAAGTTCTCTTCAGGACTTCTCGCGGGGGGTGAAGCAGCGGTTG
CAGAAGAACAGACCTGTTCTGGTGGGCCATAACCTCTTCACGGACCTAAT
TTACTTTTGTCGGTGCTTCTTCGGGCCTCTCCCGGACCGTGTGGAGGATT
TCCAAGCCATGGCTCATGAGATGTTTCCGGTGTTGATGGATACGAAGTAT
ATGGCTACACACAACTGTGGCTCCATAAATCCTAGGTCTTCCCTGCAGGA
AATCAATGACAGCCTCGCTAAACAGCCAACACCAGCAATAAGTATACACC
CTCAATTTACCAAATACAACACGCGGGCAATCGATCACGAAGCTGGCTTT
GATAGTTTGCTCACTGCTCAGGTTTTCATTAAACTTTCTGCCCAGCTCCG
AGACAGGGGAACGTCGGGGATTCCGCCAACAGTTCCAGAAACACCTCAAC
CCAGTGAAAAGTCGAAGGAGCCCACGAAGCAGGTTATAGGCGACTTCGAG
GCTACCGTCATTCTACCTAGAGGTCCCAAGTCAAACAACGTCCGTATTAT
GTTCGGCTCTATCGAAGTTGAAAGAGTCGTCCAAGACAACGGCGGTAGTG
ATGCTGGCGAGGTAACCAGAATATCCTTAACACCCCGCGACTCTCCTGAG
ACACAGAAGAAAGCCGACGAGGGCCGGTTGATTCCACGCTTAGGCGCGCA
ATTTTGGAACATTTATGGAAACAAGCTGCGCGTCTTTGGCACGAATGAAA
GGGTATGTCACATTGGCTAGATGGATATATCCGCCCAGACATTCTTCTAC
CATCTACCCAGAGTGTTGGATGACTTGGCATCCTGTTGTTTCGTATCTAT
AGACTTTGAATTCTCTGGCATCGCCAAAGGCCTCGGACCCTCTGCTAAGA
GCAGAAGCACCCTACAGGAGCGCTATGAAGAAGTCAAGAATTCCGCTGAT
CAATACCAAATCCTACAAGTCGGCTTGACTATCTGCCATGAGGATCCAGA
GACAGCAACGTACACCTTGAAACCATATAATCTATACTTGAGCCCAATCA
TCGACCGGAAGCTTGATTTAGACAGAAATTGTTCCTTCCAAAGCAGTGCC
GTCGAGTTCCTCTTGGAAAACAAGTTTAGCATGGAAGATCTGTACAAGAA
TGGCGTCACCTACTTGTCGAGAGATGAGGAAAGTCGAATAATGGCCAGAG
TCATGCAGAGAAATGAACGCACGACAGCGCGCAGTTCTCTGGACGTCGGG
GACCATGAATATGAGTCCTTAGCCTTTTTAAAGGATGTTCGCCGTCTTGT
AGATGAATGGCTGGCGCTTGGTAAAGCCCGGGAGGATTACCTTAATATCC
CGCCACCTCGGCCTATAACAGGACCTGCTCCATCCAATCACCCCAAGTCT
ATGCCAACGGACCTCAATAGGTTTCAAAAGAGGCTTGTTCATCAGCTCAT
CGAAGTGGAGTATCCGTCTTTGGTGACGGTCAGTAGGCCGGGGTTTATAC
AGATAATCGACTACGACGAACAGCGCGAGAAGGCTGTTCGCGACCAGAGG
GTGAAATGGGTACAAGAAAGGATCTGGAAACAGACTGGATTCAGATGGAT
CGCGGAGGCGCTAGCCGGGGGCGATCTGACCAACCTCGAGCCTTTCTGCT
TCATCAATTTGATGTCGTCTTCGAAGGAGAACCCCCAAAGTTCTCTTCAG
GACTTCTCGCGGGGGGTGAAGCAGCGGTTGCAGAAGAACAGACCTGTTCT
GGTGGGCCATAACCTCTTCACGGACCTAATTTACTTTTGTCGGTGCTTCT
TCGGGCCTCTCCCGGACCGTGTGGAGGATTTCCAAGCCATGGCTCATGAG
ATGTTTCCGGTGTTGATGGATACGAAGTATATGGCTACACACAACTGTGG
CTCCATAAATCCTAGGTCTTCCCTGCAGGAAATCAATGACAGCCTCGCTA
AACAGCCAACACCAGCAATAAGTATACACCCTCAATTTACCAAATACAAC
ACGCGGGCAATCGATCACGAAGCTGGCTTTGATAGTTTGCTCACTGCTCA
GGTTTTCATTAAACTTTCTGCCCAGCTCCGAGACAGGGGAACGTCGGGGA
TTCCGCCAACAGTTCCAGAAACACCTCAACCCAGTGAAAAGTCGAAGGAG
CCCACGAAGCAGGTTATAGGCGACTTCGAGGCTACCGTCATTCTACCTAG
AGGTCCCAAGTCAAACAACGTCCGTATTATGTTCGGCTCTATCGAAGTTG
AAAGAGTCGTCCAAGACAACGGCGGTAGTGATGCTGGCGAGGTAACCAGA
ATATCCTTAACACCCCGCGACTCTCCTGAGACACAGAAGAAAGCCGACGA
GGGCCGGTTGATTCCACGCTTAGGCGCGCAATTTTGGAACATTTATGGAA
ACAAGCTGCGCGTCTTTGGCACGAATGAAAGGGTATGTCACATTGGCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR036397 |
| DBxref | InterPro:IPR006941 |
| DBxref | PFAM:PF04857 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000017.1 | supercontig | ACJE01000017.1:250237..252118 + |
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