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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000002.1:1633198..1634235- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_124843-T1 ID=ASPNIDRAFT_124843-T1|Name=ASPNIDRAFT_124843-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1038bp|location=Sequence derived from alignment at ACJE01000002.1:1633198..1634235- (Aspergillus niger ATCC 1015)
CTGATCTCAGTTACCCCTCCATCCAGAGAATGTTATATTCGATTCTTGAA
CTTCAAGCCATTCAGGCGCATGGAACGGTATCGTCTCCGGAGGAATATGC
CACAGACTGGTCCCTGCAAATTGCTGCTCCCCCTTTCGTACGGCGTCTCC
TCCACTGTGCTATTGCACATGCTGCACCGGCAGTTAGAGGCACTACGCTC
AAAAAAACATGGTCCCGCGGGCTTCGAAATCCTCGTCCTCGTCGTTGAGC
CTTCGACAATCTCCCCCGTTCCTCCGCACGAAGAAGGCTTTGCACTCGCG
CAGCAGACCTTCCCGCTCTGTTCCTTCACCCGGCTCCCCTTCCACAGTAT
CTTCGAGCTTGACCCGGATGTCCATCAAATCATGTCGCAGTATGCCGGGG
AGCACTTCACAGATGACACCTCGCTGTCCGATGAGGAGCGTTTGAATCGC
TTCCGCAGGTCGATTACAACAGCCACATCCAAGTCCGATGTCGACCAAAT
TTTGTTGAACAAACTTGTCGTTGCTTTCGCAAAGAAAATGGAATGCCGCG
GCATAGTATGGGGTGACTCGGATAGCAAGCTCGCTGCAAAGACCCTCGCC
AACGTCGCGAAAGGACGCGGCTCTGCAGTGACGTGGCAGGTGTGCGATGG
AATGTCGCCTTTTGGCCTAGAATTCAACTTCCCGCTTCGGGACGTGTTCA
CGGCAGAGATACGCACCTATGCCACCCTCTTTCCCGAGCTGGCTGGCATC
ATCGTTCATGACGAGCCTCCCTCAGAGAATACGCTTACCAAGAATCTGTC
GATCGATGAGCTGATGATCCGTTATGTCAGCACTCAGGGTGAGAAATACC
CCGGCGTCATGTTGAACGTAACTAGGACTGCCAGTAAGCTCCAGTCGTCT
GGTACATCTATCGGCGGACTGCAGTGCAATTTCTGCGGGGCCTTCATGAC
TACAAATGAGAATATCACGGGCGAACAAGGCAACGAACAGCTTCAATTCT
GCTATGCCTGTGCTCGGTCCCAACCCGAATTGAGCTGT back to topCoding sequence (CDS) from alignment at ACJE01000002.1:1633198..1634235- >ASPNIDRAFT_124843-T1 ID=ASPNIDRAFT_124843-T1|Name=ASPNIDRAFT_124843-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1038bp|location=Sequence derived from alignment at ACJE01000002.1:1633198..1634235- (Aspergillus niger ATCC 1015)
CTGATCTCAGTTACCCCTCCATCCAGAGAATGTTATATTCGATTCTTGAA
CTTCAAGCCATTCAGGCGCATGGAACGGTATCGTCTCCGGAGGAATATGC
CACAGACTGGTCCCTGCAAATTGCTGCTCCCCCTTTCGTACGGCGTCTCC
TCCACTGTGCTATTGCACATGCTGCACCGGCAGTTAGAGGCACTACGCTC
AAAAAAACATGGTCCCGCGGGCTTCGAAATCCTCGTCCTCGTCGTTGAGC
CTTCGACAATCTCCCCCGTTCCTCCGCACGAAGAAGGCTTTGCACTCGCG
CAGCAGACCTTCCCGCTCTGTTCCTTCACCCGGCTCCCCTTCCACAGTAT
CTTCGAGCTTGACCCGGATGTCCATCAAATCATGTCGCAGTATGCCGGGG
AGCACTTCACAGATGACACCTCGCTGTCCGATGAGGAGCGTTTGAATCGC
TTCCGCAGGTCGATTACAACAGCCACATCCAAGTCCGATGTCGACCAAAT
TTTGTTGAACAAACTTGTCGTTGCTTTCGCAAAGAAAATGGAATGCCGCG
GCATAGTATGGGGTGACTCGGATAGCAAGCTCGCTGCAAAGACCCTCGCC
AACGTCGCGAAAGGACGCGGCTCTGCAGTGACGTGGCAGGTGTGCGATGG
AATGTCGCCTTTTGGCCTAGAATTCAACTTCCCGCTTCGGGACGTGTTCA
CGGCAGAGATACGCACCTATGCCACCCTCTTTCCCGAGCTGGCTGGCATC
ATCGTTCATGACGAGCCTCCCTCAGAGAATACGCTTACCAAGAATCTGTC
GATCGATGAGCTGATGATCCGTTATGTCAGCACTCAGGGTGAGAAATACC
CCGGCGTCATGTTGAACGTAACTAGGACTGCCAGTAAGCTCCAGTCGTCT
GGTACATCTATCGGCGGACTGCAGTGCAATTTCTGCGGGGCCTTCATGAC
TACAAATGAGAATATCACGGGCGAACAAGGCAACGAACAGCTTCAATTCT
GCTATGCCTGTGCTCGGTCCCAACCCGAATTGAGCTGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000049 | tRNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0002098 | tRNA wobble uridine modification |
| GO:0034227 | tRNA thio-modification |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019407 |
| DBxref | InterPro:IPR014729 |
| Product | cytoplasmic tRNA 2-thiolation protein 2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000002.1 | supercontig | ACJE01000002.1:1633198..1634235 - |
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