You are here

Home

ASPNIDRAFT_124993-T1, ASPNIDRAFT_124993-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_124993-T1
Unique NameASPNIDRAFT_124993-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:2513914..2514792-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_124993-T1 ID=ASPNIDRAFT_124993-T1|Name=ASPNIDRAFT_124993-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=879bp|location=Sequence derived from alignment at ACJE01000019.1:2513914..2514792- (Aspergillus niger ATCC 1015)
ATGGATGCCACCACTTCACCTCTTCAGCGTGCTTTCAACGCATTCCTCCT
CACAATGCCCCCCCAGCAACTCGAAGAGCTCCTCAGGTATCTTCAGGACA
CCCGAGCCAAGGCCAACAGCCAGGTCGCGCACGAAAATGAGCAATCTACT
GCAAGATCGAAACCCCCTCTGGACACCAATAATGAGTCGGCCGTTCAGGG
CAGTACAAACCAACGTTCTCATCAAACGCGAGGCAAGCGACCTCAGGATG
GGAAACGGCGGCCACTGAACAGTTTCATTGCTTTCAGAAGTATTCTATAC
ACTTCCATCTCATGCATGTACATCGGCTAATGATTATTAGGTTATTATTC
AGTCATGTTTCCAGACCTTACTCAGAAAGCGAAGTCGGGCATCCTTCGCT
TCTTGTGGCAGAACGACCCTTTCAAAGCTAAATGGGCCATCGTAGCCAAG
GCATACTCCATCATTCGCGATGACCATGATAATGGAGTCTCCCTTGAAAC
ATTTCTGAAACTCAACACCAACCTCATTGGCATTATCGAGCCGGACCGCT
ACCTTGACATAATGGGCTGGGAGCTGAATGTCGACGGCCAGCAGCAGTAC
ACCATGGCTAAGGTTAAGATTACAGCTACTCCTGAAGCTGAGCTCTCAAC
AAACTATTCAGTCGATGATATTGTCAAAAATTGTTACGATACAGGCTATG
TATCCCGAGACAAATGCAAGAAAAAAACAGACCATAACAAAAACGCGCCT
GTTATGGCTTTCGCTGCCCAGCCAACCTTGATTATCCACGAAAATAACAG
TATTCAAATTAATGGAAATAATACTGTTGTTACTGGTGACTGCGATGGGA
ATGCTGCTGTAGAAAGCACATTTCCCCAG
back to top

Coding sequence (CDS) from alignment at ACJE01000019.1:2513914..2514792-

>ASPNIDRAFT_124993-T1 ID=ASPNIDRAFT_124993-T1|Name=ASPNIDRAFT_124993-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1656bp|location=Sequence derived from alignment at ACJE01000019.1:2513914..2514792- (Aspergillus niger ATCC 1015)
GTTATTATTCAGTCATGTTTCCAGACCTTACTCAGAAAGCGAAGTCGGGC
ATCCTTCGCTTCTTGTGGCAGAACGACCCTTTCAAAGCTAAATGGGCCAT
CGTAGCCAAGGCATACTCCATCATTCGCGATGACCATGATAATGGAGTCT
CCCTTGAAACATTTCTGAAACTCAACACCAACCTCATTGGCATTATCGAG
CCGGACCGCTACCTTGACATAATGGGCTGGGAGCTGAATGTCGACGGCCA
GCAGCAGTACACCATGGCTAAGGTTAAGATTACAGCTACTCCTGAAGCTG
AGCTCTCAACAAACTATTCAGTCGATGATATTGTCAAAAATTGTTACGAT
ACAGGCTATGTATCCCGAGACAAATGCAAGAAAAAAACAGACCATAACAA
AAACGCGCCTGTTATGGCTTTCGCTGCCCAGCCAACCTTGATTATCCACG
AAAATAACAGTATTCAAATTAATGGAAATAATACTGTTGTTACTGGTGAC
TGCGATGGGAATGCTGCTGTAGAAAGCACATTTCCCCAGATGGATGCCAC
CACTTCACCTCTTCAGCGTGCTTTCAACGCATTCCTCCTCACAATGCCCC
CCCAGCAACTCGAAGAGCTCCTCAGGTATCTTCAGGACACCCGAGCCAAG
GCCAACAGCCAGGTCGCGCACGAAAATGAGCAATCTACTGCAAGATCGAA
ACCCCCTCTGGACACCAATAATGAGTCGGCCGTTCAGGGCAGTACAAACC
AACGTTCTCATCAAACGCGAGGCAAGCGACCTCAGGATGGGAAACGGCGG
CCACTGAACAGTTTCATTGCTTTCAGAAGTTATTATTCAGTCATGTTTCC
AGACCTTACTCAGAAAGCGAAGTCGGGCATCCTTCGCTTCTTGTGGCAGA
ACGACCCTTTCAAAGCTAAATGGGCCATCGTAGCCAAGGCATACTCCATC
ATTCGCGATGACCATGATAATGGAGTCTCCCTTGAAACATTTCTGAAACT
CAACACCAACCTCATTGGCATTATCGAGCCGGACCGCTACCTTGACATAA
TGGGCTGGGAGCTGAATGTCGACGGCCAGCAGCAGTACACCATGGCTAAG
GTTAAGATTACAGCTACTCCTGAAGCTGAGCTCTCAACAAACTATTCAGT
CGATGATATTGTCAAAAATTGTTACGATACAGGCTATGTATCCCGAGACA
AATGCAAGAAAAAAACAGACCATAACAAAAACGCGCCTGTTATGGCTTTC
GCTGCCCAGCCAACCTTGATTATCCACGAAAATAACAGTATTCAAATTAA
TGGAAATAATACTGTTGTTACTGGTGACTGCGATGGGAATGCTGCTGTAG
AAAGCACATTTCCCCAGATGGATGCCACCACTTCACCTCTTCAGCGTGCT
TTCAACGCATTCCTCCTCACAATGCCCCCCCAGCAACTCGAAGAGCTCCT
CAGGTATCTTCAGGACACCCGAGCCAAGGCCAACAGCCAGGTCGCGCACG
AAAATGAGCAATCTACTGCAAGATCGAAACCCCCTCTGGACACCAATAAT
GAGTCGGCCGTTCAGGGCAGTACAAACCAACGTTCTCATCAAACGCGAGG
CAAGCGACCTCAGGATGGGAAACGGCGGCCACTGAACAGTTTCATTGCTT
TCAGAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0045895positive regulation of mating-type specific transcription, DNA-templated
GO:0007531mating type determination
Vocabulary: Molecular Function
TermDefinition
GO:0008301DNA binding, bending
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_124993ASPNIDRAFT_124993Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_124993-T1ASPNIDRAFT_124993-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_124993-T1.cdsASPNIDRAFT_124993-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_124993-T1.exon2ASPNIDRAFT_124993-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_124993-T1.exon1ASPNIDRAFT_124993-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR006856
DBxrefPFAM:PF04769
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:2513914..2514792 -
Powered by Drupal