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ASPNIDRAFT_125108-T1, ASPNIDRAFT_125108-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_125108-T1
Unique NameASPNIDRAFT_125108-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:651598..652618-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_125108-T1 ID=ASPNIDRAFT_125108-T1|Name=ASPNIDRAFT_125108-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1021bp|location=Sequence derived from alignment at ACJE01000010.1:651598..652618- (Aspergillus niger ATCC 1015)
GGAAAGACGAGTGGACGTGACAAGGACACTTCTGTCGAACGGTGCGAGGT
TGAGCTCCAGGAAGACCTTGATGAAACCGAATGCAGACTCGTCATTAGAT
TAATATGTGGGCTTGGTAAGCATTCGATATGTTCTGAGTTCGGGCTTATC
TGCGGCTCCAGCTCACAGTCCTTAGCAGGCGTCATCAAGCTCTACAAGCT
TACGTATGAACCTGTCCATGTGCAACATGCCATATTCGACAGATCCAAAG
CGACAAACGAATGGAGTATTGAACCCAAGTACTTGAAGGAGATAACGGAT
CATTTCGGCCCCTCAGCAGAGCATCTGGATATCTACTCCGAGCAAGGCAA
GGCTGTCTTTACCAGCTTTACCACGAAAAGCTCAGACGGAAAAGGTAATG
CTACCGGACTGTTCCATGAGTTTACCAGCCTACTCACCGTCTGTCACAGA
AATCCTTCGCCAGCCGGTGCACACGTCCGTAGCTATTGAGAAAAGGGACT
TCGATTACTATTTAGCAGAAGACCATCTTCACGTTGCCATCCACATGAAG
GACTTCAAGGCGGCAATAGCACATGCTGAGACAGCAAACGCAAAGATCAC
CGCCCGGTTCACCCGTCCATCTCGCCCTCTGCAATTCGCCTACGAATCTG
AGGGCGTCAAAACCGAATTTACGCTGATGACTAGAGGAGAGTCGCCCGGG
GAGGACGTTCCGGGCTCCTCTCGAGCAGCACCTCAGTTATCCGCACGTCA
AACTCCAGCACCCGTGCAGATAAGCCAAAGGAACACGGCTCCAGAGACCG
CACAAATGCCTCCTCCCCGCAGTCGGTCGATCCGGCCACTCACTGGGACT
TCTACTCGGGCTTCACAATCCAACACCGAGACCCAACAACCTCCGCCATC
GATGGAGTTCGACAGTCTGTTCGTTCCAGCGGATGACGACAGGCAATGGG
ACGTACCAAATGATGAGGATGAAGGTCCAGTCGAGGACGAGCTCGGCTGG
GATGCCACTGGAGAGCAGGTA
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Coding sequence (CDS) from alignment at ACJE01000010.1:651598..652618-

>ASPNIDRAFT_125108-T1 ID=ASPNIDRAFT_125108-T1|Name=ASPNIDRAFT_125108-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2715bp|location=Sequence derived from alignment at ACJE01000010.1:651598..652618- (Aspergillus niger ATCC 1015)
AAATCCTTCGCCAGCCGGTGCACACGTCCGTAGCTATTGAGAAAAGGGAC
TTCGATTACTATTTAGCAGAAGACCATCTTCACGTTGCCATCCACATGAA
GGACTTCAAGGCGGCAATAGCACATGCTGAGACAGCAAACGCAAAGATCA
CCGCCCGGTTCACCCGTCCATCTCGCCCTCTGCAATTCGCCTACGAATCT
GAGGGCGTCAAAACCGAATTTACGCTGATGACTAGAGGAGAGTCGCCCGG
GGAGGACGTTCCGGGCTCCTCTCGAGCAGCACCTCAGTTATCCGCACGTC
AAACTCCAGCACCCGTGCAGATAAGCCAAAGGAACACGGCTCCAGAGACC
GCACAAATGCCTCCTCCCCGCAGTCGGTCGATCCGGCCACTCACTGGGAC
TTCTACTCGGGCTTCACAATCCAACACCGAGACCCAACAACCTCCGCCAT
CGATGGAGTTCGACAGTCTGTTCGTTCCAGCGGATGACGACAGGCAATGG
GACGTACCAAATGATGAGGATGAAGGTCCAGTCGAGGACGAGCTCGGCTG
GGATGCCACTGGAGAGCAGGTCAGGCGTCATCAAGCTCTACAAGCTTACG
TATGAACCTGTCCATGTGCAACATGCCATATTCGACAGATCCAAAGCGAC
AAACGAATGGAGTATTGAACCCAAGTACTTGAAGGAGATAACGGATCATT
TCGGCCCCTCAGCAGAGCATCTGGATATCTACTCCGAGCAAGGCAAGGCT
GTCTTTACCAGCTTTACCACGAAAAGCTCAGACGGAAAAGGGAAAGACGA
GTGGACGTGACAAGGACACTTCTGTCGAACGGTGCGAGGTTGAGCTCCAG
GAAGACCTTGATGAAACCGAATGCAGACTCGTCATTAGATTAATATGTGG
GCTTGAAATCCTTCGCCAGCCGGTGCACACGTCCGTAGCTATTGAGAAAA
GGGACTTCGATTACTATTTAGCAGAAGACCATCTTCACGTTGCCATCCAC
ATGAAGGACTTCAAGGCGGCAATAGCACATGCTGAGACAGCAAACGCAAA
GATCACCGCCCGGTTCACCCGTCCATCTCGCCCTCTGCAATTCGCCTACG
AATCTGAGGGCGTCAAAACCGAATTTACGCTGATGACTAGAGGAGAGTCG
CCCGGGGAGGACGTTCCGGGCTCCTCTCGAGCAGCACCTCAGTTATCCGC
ACGTCAAACTCCAGCACCCGTGCAGATAAGCCAAAGGAACACGGCTCCAG
AGACCGCACAAATGCCTCCTCCCCGCAGTCGGTCGATCCGGCCACTCACT
GGGACTTCTACTCGGGCTTCACAATCCAACACCGAGACCCAACAACCTCC
GCCATCGATGGAGTTCGACAGTCTGTTCGTTCCAGCGGATGACGACAGGC
AATGGGACGTACCAAATGATGAGGATGAAGGTCCAGTCGAGGACGAGCTC
GGCTGGGATGCCACTGGAGAGCAGGTCAGGCGTCATCAAGCTCTACAAGC
TTACGTATGAACCTGTCCATGTGCAACATGCCATATTCGACAGATCCAAA
GCGACAAACGAATGGAGTATTGAACCCAAGTACTTGAAGGAGATAACGGA
TCATTTCGGCCCCTCAGCAGAGCATCTGGATATCTACTCCGAGCAAGGCA
AGGCTGTCTTTACCAGCTTTACCACGAAAAGCTCAGACGGAAAAGGGAAA
GACGAGTGGACGTGACAAGGACACTTCTGTCGAACGGTGCGAGGTTGAGC
TCCAGGAAGACCTTGATGAAACCGAATGCAGACTCGTCATTAGATTAATA
TGTGGGCTTGAAATCCTTCGCCAGCCGGTGCACACGTCCGTAGCTATTGA
GAAAAGGGACTTCGATTACTATTTAGCAGAAGACCATCTTCACGTTGCCA
TCCACATGAAGGACTTCAAGGCGGCAATAGCACATGCTGAGACAGCAAAC
GCAAAGATCACCGCCCGGTTCACCCGTCCATCTCGCCCTCTGCAATTCGC
CTACGAATCTGAGGGCGTCAAAACCGAATTTACGCTGATGACTAGAGGAG
AGTCGCCCGGGGAGGACGTTCCGGGCTCCTCTCGAGCAGCACCTCAGTTA
TCCGCACGTCAAACTCCAGCACCCGTGCAGATAAGCCAAAGGAACACGGC
TCCAGAGACCGCACAAATGCCTCCTCCCCGCAGTCGGTCGATCCGGCCAC
TCACTGGGACTTCTACTCGGGCTTCACAATCCAACACCGAGACCCAACAA
CCTCCGCCATCGATGGAGTTCGACAGTCTGTTCGTTCCAGCGGATGACGA
CAGGCAATGGGACGTACCAAATGATGAGGATGAAGGTCCAGTCGAGGACG
AGCTCGGCTGGGATGCCACTGGAGAGCAGGTCAGGCGTCATCAAGCTCTA
CAAGCTTACGTATGAACCTGTCCATGTGCAACATGCCATATTCGACAGAT
CCAAAGCGACAAACGAATGGAGTATTGAACCCAAGTACTTGAAGGAGATA
ACGGATCATTTCGGCCCCTCAGCAGAGCATCTGGATATCTACTCCGAGCA
AGGCAAGGCTGTCTTTACCAGCTTTACCACGAAAAGCTCAGACGGAAAAG
GGAAAGACGAGTGGACGTGACAAGGACACTTCTGTCGAACGGTGCGAGGT
TGAGCTCCAGGAAGACCTTGATGAAACCGAATGCAGACTCGTCATTAGAT
TAATATGTGGGCTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030896checkpoint clamp complex
Vocabulary: Biological Process
TermDefinition
GO:0000077DNA damage checkpoint
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_125108ASPNIDRAFT_125108Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_125108-T1ASPNIDRAFT_125108-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_125108-T1.cdsASPNIDRAFT_125108-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_125108-T1.utr3p1ASPNIDRAFT_125108-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_125108-T1.exon3ASPNIDRAFT_125108-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_125108-T1.exon2ASPNIDRAFT_125108-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_125108-T1.exon1ASPNIDRAFT_125108-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR007268
DBxrefPFAM:PF04139
ProductHypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:651598..652618 -
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