You are here

Home

ASPNIDRAFT_125526-T1, ASPNIDRAFT_125526-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_125526-T1
Unique NameASPNIDRAFT_125526-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:3492556..3493519+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_125526-T1 ID=ASPNIDRAFT_125526-T1|Name=ASPNIDRAFT_125526-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=964bp|location=Sequence derived from alignment at ACJE01000010.1:3492556..3493519+ (Aspergillus niger ATCC 1015)
GACCAAAGCGGCCGCCGCATCGCCATTCTGGGCACCATCGACGGCCAACA
AGGCATTTTAATTGCTGAACGCGCCGCCTTTGCGACCGAAACCCCCGAAG
CCCTACAAGCCTTCCACGCCGCCATCACCGATGTCAACAACCTCGGCGAC
AACGACATCTACCGATGGTACCTAGCCTCTTCGCACTCAGCACCAGGAAG
CCAACAACCCCCGGACCTCAAGATAAACCTCATCTGGCCCTGCACTGAGT
CGCACATCAAGAAGTACTCCGAGCAAGTTGTTCGCATGGTCACCGAGACA
CCGGAGATATACCGCGACTCTATTCGTCCGTACATGAGCGCGAAGCGCGA
GGAAGGGCGACTGAATTGGGTATTTAATATTCTTGAGGGTCGGACGGAGC
AAGAGGACGTGATTCTTCGGGACAAGGGACATGATGGGAATGAAGAGGGA
GGGTTCTTGGTGTTGCCGGATTTGAACTGGGATCGGAAGACGATGGGATC
GTTGCATTTGCTAGCGCTGGTTATGAGGAGGGATATTTGGTCCTTGAGGG
ATCTAAAGAAGAAACATATCCCTTGGTTGAAGTATCTGAGGGAGAGGCTG
TTGGAGGAGACGGTTAGGGTGTATCCCCAGTTGGAGACGGATCAGTTGAA
ACTTTATGTGCACTGTAAGTCTCCCTTTCTGGCGCTATGGGTTTGGGGGT
ATTTGGTTACTGATTTGGATGTGTCGTATAGATCAACCGACGTATTATCA
TTTCCATGTGCACATTGTGAACGTCATGCTCGAGGCGGGTGCAACTCAGG
CGACTGGAAAGGCGTTCGGATTGGAGAACATCATCTCGCAGTTGGAGACA
CTGGATGGAGACGAAGAGGCTGGAATGGCGGATGTCAGCTTAACTTATTT
CCTGGGTGAAGCCAGTGAACTCTGGTCGAATGTGTTCGGGCCACTGAAGC
GGGGAGAGAAGCCG
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:3492556..3493519+

>ASPNIDRAFT_125526-T1 ID=ASPNIDRAFT_125526-T1|Name=ASPNIDRAFT_125526-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1794bp|location=Sequence derived from alignment at ACJE01000010.1:3492556..3493519+ (Aspergillus niger ATCC 1015)
GACCAAAGCGGCCGCCGCATCGCCATTCTGGGCACCATCGACGGCCAACA
AGGCATTTTAATTGCTGAACGCGCCGCCTTTGCGACCGAAACCCCCGAAG
CCCTACAAGCCTTCCACGCCGCCATCACCGATGTCAACAACCTCGGCGAC
AACGACATCTACCGATGGTACCTAGCCTCTTCGCACTCAGCACCAGGAAG
CCAACAACCCCCGGACCTCAAGATAAACCTCATCTGGCCCTGCACTGAGT
CGCACATCAAGAAGTACTCCGAGCAAGTTGTTCGCATGGTCACCGAGACA
CCGGAGATATACCGCGACTCTATTCGTCCGTACATGAGCGCGAAGCGCGA
GGAAGGGCGACTGAATTGGGTATTTAATATTCTTGAGGGTCGGACGGAGC
AAGAGGACGTGATTCTTCGGGACAAGGGACATGATGGGAATGAAGAGGGA
GGGTTCTTGGTGTTGCCGGATTTGAACTGGGATCGGAAGACGATGGGATC
GTTGCATTTGCTAGCGCTGGTTATGAGGAGGGATATTTGGTCCTTGAGGG
ATCTAAAGAAGAAACATATCCCTTGGTTGAAGTATCTGAGGGAGAGGCTG
TTGGAGGAGACGGTTAGGGTGTATCCCCAGTTGGAGACGGATCAGTTGAA
ACTTTATGTGCACTATCAACCGACGTATTATCATTTCCATGTGCACATTG
TGAACGTCATGCTCGAGGCGGGTGCAACTCAGGCGACTGGAAAGGCGTTC
GGATTGGAGAACATCATCTCGCAGTTGGAGACACTGGATGGAGACGAAGA
GGCTGGAATGGCGGATGTCAGCTTAACTTATTTCCTGGGTGAAGCCAGTG
AACTCTGGTCGAATGTGTTCGGGCCACTGAAGCGGGGAGAGAAGCCGGAC
CAAAGCGGCCGCCGCATCGCCATTCTGGGCACCATCGACGGCCAACAAGG
CATTTTAATTGCTGAACGCGCCGCCTTTGCGACCGAAACCCCCGAAGCCC
TACAAGCCTTCCACGCCGCCATCACCGATGTCAACAACCTCGGCGACAAC
GACATCTACCGATGGTACCTAGCCTCTTCGCACTCAGCACCAGGAAGCCA
ACAACCCCCGGACCTCAAGATAAACCTCATCTGGCCCTGCACTGAGTCGC
ACATCAAGAAGTACTCCGAGCAAGTTGTTCGCATGGTCACCGAGACACCG
GAGATATACCGCGACTCTATTCGTCCGTACATGAGCGCGAAGCGCGAGGA
AGGGCGACTGAATTGGGTATTTAATATTCTTGAGGGTCGGACGGAGCAAG
AGGACGTGATTCTTCGGGACAAGGGACATGATGGGAATGAAGAGGGAGGG
TTCTTGGTGTTGCCGGATTTGAACTGGGATCGGAAGACGATGGGATCGTT
GCATTTGCTAGCGCTGGTTATGAGGAGGGATATTTGGTCCTTGAGGGATC
TAAAGAAGAAACATATCCCTTGGTTGAAGTATCTGAGGGAGAGGCTGTTG
GAGGAGACGGTTAGGGTGTATCCCCAGTTGGAGACGGATCAGTTGAAACT
TTATGTGCACTATCAACCGACGTATTATCATTTCCATGTGCACATTGTGA
ACGTCATGCTCGAGGCGGGTGCAACTCAGGCGACTGGAAAGGCGTTCGGA
TTGGAGAACATCATCTCGCAGTTGGAGACACTGGATGGAGACGAAGAGGC
TGGAATGGCGGATGTCAGCTTAACTTATTTCCTGGGTGAAGCCAGTGAAC
TCTGGTCGAATGTGTTCGGGCCACTGAAGCGGGGAGAGAAGCCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0000290deadenylation-dependent decapping of nuclear-transcribed mRNA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_125526ASPNIDRAFT_125526Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_125526-T1.exon1ASPNIDRAFT_125526-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_125526-T1.exon2ASPNIDRAFT_125526-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_125526-T1.cdsASPNIDRAFT_125526-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_125526-T1ASPNIDRAFT_125526-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011145
DBxrefInterPro:IPR036265
DBxrefInterPro:IPR008594
DBxrefPFAM:PF11969
DBxrefPFAM:PF05652
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:3492556..3493519 +
Powered by Drupal