You are here

Home

ASPNIDRAFT_126082-T1, ASPNIDRAFT_126082-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_126082-T1
Unique NameASPNIDRAFT_126082-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:1188418..1189326-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_126082-T1 ID=ASPNIDRAFT_126082-T1|Name=ASPNIDRAFT_126082-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=909bp|location=Sequence derived from alignment at ACJE01000008.1:1188418..1189326- (Aspergillus niger ATCC 1015)
AGACTGGACTTACAGCATCGCGTGCTAGTCAAAACAAGCGGATATACCCT
CATTCATCCTTCAATCCCTCTCAACGAAATTCGATCTGTTGCAGACATAG
CTACTGGAACTGGGTGAGTCTGTCCCCTCCGTGCAAGACCGGGTCATTGG
AGCTGATGGGCAATTTTTCTGTCAGAATTTGGCTGCAAGATGTGTCGAAA
TTTCTGGACACACCACAAATTGAACGCTACTATCATGGCTTCGATATTTC
AGCCGAGCAATTTCCTGAGAATCCAGGAGCGATCCAGTTTTCTGTTCAAG
ATCTGACGATTCCATTTCCTCGAGAACATCGGGAACGATATGACTTGGTA
CACGTTCGTCTTCTAGTCGCTGCCCTTGAGGAAGCTGACTACAAAGCTGC
GATCGCAAATATCTATGATATATTGAGTATGGCAAACCCTTTCCTGTGCA
CATCGCATTGCTGCCTCACGAGTTGGTACTAATATGACCGCAGAGCCCGG
TGGCTATCTCCAGTGGGAGGAAATTGACGAAGAAACCTACCTCACGGAAG
GTTACCCAGTGCTCAGTGAGCTTCATCGCTGTTTTGACTATGGACTGGCA
GCCGAAGGCAAATGCTTTCAGGCTTCAGCCAAGGTTTATGAAGAGAGCCG
AGCAGCTGGGTTTGTAGGTGTAGAGCGGCTGTGTTATAACTCTCACCAGA
ACCCTGATCTGCGCTATGAGATCGAGGAGAGACTCACTGCGATAATTAGA
ACACTCTATGCCTTTCTTTTGCTGAGATCTAAGCAGGTCGATACCGCGCT
GGTCGCATCACAAGAGGCAGAGAAACTGGTTGAGCAGCATCGGCGTCTGT
GCGCACAGGGAAATTCCTCGCCACTCAAGTTGATGAGGGTTGTGGGTCGG
AAGCCTTTA
back to top

Coding sequence (CDS) from alignment at ACJE01000008.1:1188418..1189326-

>ASPNIDRAFT_126082-T1 ID=ASPNIDRAFT_126082-T1|Name=ASPNIDRAFT_126082-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2337bp|location=Sequence derived from alignment at ACJE01000008.1:1188418..1189326- (Aspergillus niger ATCC 1015)
AGCCCGGTGGCTATCTCCAGTGGGAGGAAATTGACGAAGAAACCTACCTC
ACGGAAGGTTACCCAGTGCTCAGTGAGCTTCATCGCTGTTTTGACTATGG
ACTGGCAGCCGAAGGCAAATGCTTTCAGGCTTCAGCCAAGGTTTATGAAG
AGAGCCGAGCAGCTGGGTTTGTAGGTGTAGAGCGGCTGTGTTATAACTCT
CACCAGAACCCTGATCTGCGCTATGAGATCGAGGAGAGACTCACTGCGAT
AATTAGAACACTCTATGCCTTTCTTTTGCTGAGATCTAAGCAGGTCGATA
CCGCGCTGGTCGCATCACAAGAGGCAGAGAAACTGGTTGAGCAGCATCGG
CGTCTGTGCGCACAGGGAAATTCCTCGCCACTCAAGTTGATGAGGGTTGT
GGGTCGGAAGCCTTTAATTTGGCTGCAAGATGTGTCGAAATTTCTGGACA
CACCACAAATTGAACGCTACTATCATGGCTTCGATATTTCAGCCGAGCAA
TTTCCTGAGAATCCAGGAGCGATCCAGTTTTCTGTTCAAGATCTGACGAT
TCCATTTCCTCGAGAACATCGGGAACGATATGACTTGGTACACGTTCGTC
TTCTAGTCGCTGCCCTTGAGGAAGCTGACTACAAAGCTGCGATCGCAAAT
ATCTATGATATATTGAAGACTGGACTTACAGCATCGCGTGCTAGTCAAAA
CAAGCGGATATACCCTCATTCATCCTTCAATCCCTCTCAACGAAATTCGA
TCTGTTGCAGACATAGCTACTGGAACTGGAGCCCGGTGGCTATCTCCAGT
GGGAGGAAATTGACGAAGAAACCTACCTCACGGAAGGTTACCCAGTGCTC
AGTGAGCTTCATCGCTGTTTTGACTATGGACTGGCAGCCGAAGGCAAATG
CTTTCAGGCTTCAGCCAAGGTTTATGAAGAGAGCCGAGCAGCTGGGTTTG
TAGGTGTAGAGCGGCTGTGTTATAACTCTCACCAGAACCCTGATCTGCGC
TATGAGATCGAGGAGAGACTCACTGCGATAATTAGAACACTCTATGCCTT
TCTTTTGCTGAGATCTAAGCAGGTCGATACCGCGCTGGTCGCATCACAAG
AGGCAGAGAAACTGGTTGAGCAGCATCGGCGTCTGTGCGCACAGGGAAAT
TCCTCGCCACTCAAGTTGATGAGGGTTGTGGGTCGGAAGCCTTTAATTTG
GCTGCAAGATGTGTCGAAATTTCTGGACACACCACAAATTGAACGCTACT
ATCATGGCTTCGATATTTCAGCCGAGCAATTTCCTGAGAATCCAGGAGCG
ATCCAGTTTTCTGTTCAAGATCTGACGATTCCATTTCCTCGAGAACATCG
GGAACGATATGACTTGGTACACGTTCGTCTTCTAGTCGCTGCCCTTGAGG
AAGCTGACTACAAAGCTGCGATCGCAAATATCTATGATATATTGAAGACT
GGACTTACAGCATCGCGTGCTAGTCAAAACAAGCGGATATACCCTCATTC
ATCCTTCAATCCCTCTCAACGAAATTCGATCTGTTGCAGACATAGCTACT
GGAACTGGAGCCCGGTGGCTATCTCCAGTGGGAGGAAATTGACGAAGAAA
CCTACCTCACGGAAGGTTACCCAGTGCTCAGTGAGCTTCATCGCTGTTTT
GACTATGGACTGGCAGCCGAAGGCAAATGCTTTCAGGCTTCAGCCAAGGT
TTATGAAGAGAGCCGAGCAGCTGGGTTTGTAGGTGTAGAGCGGCTGTGTT
ATAACTCTCACCAGAACCCTGATCTGCGCTATGAGATCGAGGAGAGACTC
ACTGCGATAATTAGAACACTCTATGCCTTTCTTTTGCTGAGATCTAAGCA
GGTCGATACCGCGCTGGTCGCATCACAAGAGGCAGAGAAACTGGTTGAGC
AGCATCGGCGTCTGTGCGCACAGGGAAATTCCTCGCCACTCAAGTTGATG
AGGGTTGTGGGTCGGAAGCCTTTAATTTGGCTGCAAGATGTGTCGAAATT
TCTGGACACACCACAAATTGAACGCTACTATCATGGCTTCGATATTTCAG
CCGAGCAATTTCCTGAGAATCCAGGAGCGATCCAGTTTTCTGTTCAAGAT
CTGACGATTCCATTTCCTCGAGAACATCGGGAACGATATGACTTGGTACA
CGTTCGTCTTCTAGTCGCTGCCCTTGAGGAAGCTGACTACAAAGCTGCGA
TCGCAAATATCTATGATATATTGAAGACTGGACTTACAGCATCGCGTGCT
AGTCAAAACAAGCGGATATACCCTCATTCATCCTTCAATCCCTCTCAACG
AAATTCGATCTGTTGCAGACATAGCTACTGGAACTGG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126082ASPNIDRAFT_126082Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126082-T1ASPNIDRAFT_126082-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126082-T1.cdsASPNIDRAFT_126082-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126082-T1.utr3p1ASPNIDRAFT_126082-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126082-T1.exon3ASPNIDRAFT_126082-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_126082-T1.exon2ASPNIDRAFT_126082-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_126082-T1.exon1ASPNIDRAFT_126082-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR029063
DBxrefPFAM:PF13649
DBxrefPFAM:PF13489
DBxrefPFAM:PF08241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:1188418..1189326 -
Powered by Drupal