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ASPNIDRAFT_126341-T1, ASPNIDRAFT_126341-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_126341-T1
Unique NameASPNIDRAFT_126341-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:869114..870188+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_126341-T1 ID=ASPNIDRAFT_126341-T1|Name=ASPNIDRAFT_126341-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1075bp|location=Sequence derived from alignment at ACJE01000016.1:869114..870188+ (Aspergillus niger ATCC 1015)
CCGGCTACCGGAGAAAAGAGAAAGAGGGGTCGTCCCAGGAAATATCCTGA
GGGTAGTACTCCCAAGCGCCCTGACGGCCCCAAAAGAGGCCGTGGCCGTC
CTCGTAAAGATCCGAATGCCCGTCAGTTCCCTCTTCGTCCCATAATTATC
TCTGATGCTCTTACGGACAACGCCCACACGATTTCTTTTGTCATTCCAGC
CTCCTATCAACGATGTGTTCGGTATGATATTATCTACAGCATTTGCTGAC
ATACACCAGCTACTCCCGCAAAATCTACAACCCCCAAGCAGGGCAAACGG
GGCAGGCCAAGGAAGAACCCGATCGAGAATGGAACCGAACCTACCTCATC
AACAACGAAACCAGAGACGATCGATACCACATCCTTCGAAGGACGCTCAT
ACTGGTTGATGAAGGCTGAACCGGAATCGCGATTAGAGAAAGGTGTTGAT
GTAAAATTCTCCATTGATGACTTGGCTTCTCGCAAGGAGCCGGAGCCATG
GGACGGTACGTTTCCATAATAGGGCCTTGAATGATTGATATATCTGCTGA
TCACCCAGTAGGTGTGCGTAACCCTGTTGGTAAGTGAGACCATTGGCGGT
GGCAAGCTAGCCTTCTGGCTTACAAGCGACATAGCACAAAAACATATCCG
TGACATGAAGAAGGGTGATCTCGCCTTCTTCTACCACTCCAACTGCAAAG
TACCAGGCATTGCGGGTATCATGGAGATTGTCCAGGAGCATTCACCAGAT
GGTTAGTCCTAACACGAGCCCTTTCTGGAAAGGACAAGGTCAGCTAATAC
GGCGAGCATGTTTAGAGTCAGCCTTCGACCCCGCCCACCCATACTACGAC
GAAAAGTCGAACCGAGACGATCCCAAGTGGCAGGTTGTGCACGTAGAGTT
CCGGCGCAAGTTCAGCAAAATGATTACGCTGAACGATCTCAAATCATATG
CACAGTCCGAGCGGGCTCTTGAAAATATGCAGGTGCTGAAGCAGTCCCGG
CTGAGTGTGACGCCAGTAAGCGTCACAGAATGGGCGTTTATCATGCGGGT
AGCGGACGAAAACGAGGCCAAGGCA
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Coding sequence (CDS) from alignment at ACJE01000016.1:869114..870188+

>ASPNIDRAFT_126341-T1 ID=ASPNIDRAFT_126341-T1|Name=ASPNIDRAFT_126341-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2972bp|location=Sequence derived from alignment at ACJE01000016.1:869114..870188+ (Aspergillus niger ATCC 1015)
CCGGCTACCGGAGAAAAGAGAAAGAGGGGTCGTCCCAGGAAATATCCTGA
GGGTAGTACTCCCAAGCGCCCTGACGGCCCCAAAAGAGGCCGTGGCCGTC
CTCGTAAAGATCCGAATGCCCCTACTCCCGCAAAATCTACAACCCCCAAG
CAGGGCAAACGGGGCAGGCCAAGGAAGAACCCGATCGAGAATGGAACCGA
ACCTACCTCATCAACAACGAAACCAGAGACGATCGATACCACATCCTTCG
AAGGACGCTCATACTGGTTGATGAAGGCTGAACCGGAATCGCGATTAGAG
AAAGGTGTTGATGTAAAATTCTCCATTGATGACTTGGCTTCTCGCAAGGA
GCCGGAGCCATGGGACGCACAAAAACATATCCGTGACATGAAGAAGGGTG
ATCTCGCCTTCTTCTACCACTCCAACTGCAAAGTACCAGGCATTGCGGGT
ATCATGGAGATTGTCCAGGAGCATTCACCAGATGAGTCAGCCTTCGACCC
CGCCCACCCATACTACGACGAAAAGTCGAACCGAGACGATCCCAAGTGGC
AGGTTGTGCACGTAGAGTTCCGGCGCAAGTTCAGCAAAATGATTACGCTG
AACGATCTCAAATCATATGCACAGTCCGAGCGGGCTCTTGAAAATATGCA
GGTGCTGAAGCAGTCCCGGCTGAGTGTGACGCCAGTAAGCGTCACAGAAT
GGGCGTTTATCATGCGGGTAGCGGACGAAAACGAGGCCAAGGCCCGGCTA
CCGGAGAAAAGAGAAAGAGGGGTCGTCCCAGGAAATATCCTGAGGGTAGT
ACTCCCAAGCGCCCTGACGGCCCCAAAAGAGGCCGTGGCCGTCCTCGTAA
AGATCCGAATGCCCCTACTCCCGCAAAATCTACAACCCCCAAGCAGGGCA
AACGGGGCAGGCCAAGGAAGAACCCGATCGAGAATGGAACCGAACCTACC
TCATCAACAACGAAACCAGAGACGATCGATACCACATCCTTCGAAGGACG
CTCATACTGGTTGATGAAGGCTGAACCGGAATCGCGATTAGAGAAAGGTG
TTGATGTAAAATTCTCCATTGATGACTTGGCTTCTCGCAAGGAGCCGGAG
CCATGGGACGCACAAAAACATATCCGTGACATGAAGAAGGGTGATCTCGC
CTTCTTCTACCACTCCAACTGCAAAGTACCAGGCATTGCGGGTATCATGG
AGATTGTCCAGGAGCATTCACCAGATGAGTCAGCCTTCGACCCCGCCCAC
CCATACTACGACGAAAAGTCGAACCGAGACGATCCCAAGTGGCAGGTTGT
GCACGTAGAGTTCCGGCGCAAGTTCAGCAAAATGATTACGCTGAACGATC
TCAAATCATATGCACAGTCCGAGCGGGCTCTTGAAAATATGCAGGTGCTG
AAGCAGTCCCGGCTGAGTGTGACGCCAGTAAGCGTCACAGAATGGGCGTT
TATCATGCGGGTAGCGGACGAAAACGAGGCCAAGGCCCGGCTACCGGAGA
AAAGAGAAAGAGGGGTCGTCCCAGGAAATATCCTGAGGGTAGTACTCCCA
AGCGCCCTGACGGCCCCAAAAGAGGCCGTGGCCGTCCTCGTAAAGATCCG
AATGCCCCTACTCCCGCAAAATCTACAACCCCCAAGCAGGGCAAACGGGG
CAGGCCAAGGAAGAACCCGATCGAGAATGGAACCGAACCTACCTCATCAA
CAACGAAACCAGAGACGATCGATACCACATCCTTCGAAGGACGCTCATAC
TGGTTGATGAAGGCTGAACCGGAATCGCGATTAGAGAAAGGTGTTGATGT
AAAATTCTCCATTGATGACTTGGCTTCTCGCAAGGAGCCGGAGCCATGGG
ACGCACAAAAACATATCCGTGACATGAAGAAGGGTGATCTCGCCTTCTTC
TACCACTCCAACTGCAAAGTACCAGGCATTGCGGGTATCATGGAGATTGT
CCAGGAGCATTCACCAGATGAGTCAGCCTTCGACCCCGCCCACCCATACT
ACGACGAAAAGTCGAACCGAGACGATCCCAAGTGGCAGGTTGTGCACGTA
GAGTTCCGGCGCAAGTTCAGCAAAATGATTACGCTGAACGATCTCAAATC
ATATGCACAGTCCGAGCGGGCTCTTGAAAATATGCAGGTGCTGAAGCAGT
CCCGGCTGAGTGTGACGCCAGTAAGCGTCACAGAATGGGCGTTTATCATG
CGGGTAGCGGACGAAAACGAGGCCAAGGCCCGGCTACCGGAGAAAAGAGA
AAGAGGGGTCGTCCCAGGAAATATCCTGAGGGTAGTACTCCCAAGCGCCC
TGACGGCCCCAAAAGAGGCCGTGGCCGTCCTCGTAAAGATCCGAATGCCC
CTACTCCCGCAAAATCTACAACCCCCAAGCAGGGCAAACGGGGCAGGCCA
AGGAAGAACCCGATCGAGAATGGAACCGAACCTACCTCATCAACAACGAA
ACCAGAGACGATCGATACCACATCCTTCGAAGGACGCTCATACTGGTTGA
TGAAGGCTGAACCGGAATCGCGATTAGAGAAAGGTGTTGATGTAAAATTC
TCCATTGATGACTTGGCTTCTCGCAAGGAGCCGGAGCCATGGGACGCACA
AAAACATATCCGTGACATGAAGAAGGGTGATCTCGCCTTCTTCTACCACT
CCAACTGCAAAGTACCAGGCATTGCGGGTATCATGGAGATTGTCCAGGAG
CATTCACCAGATGAGTCAGCCTTCGACCCCGCCCACCCATACTACGACGA
AAAGTCGAACCGAGACGATCCCAAGTGGCAGGTTGTGCACGTAGAGTTCC
GGCGCAAGTTCAGCAAAATGATTACGCTGAACGATCTCAAATCATATGCA
CAGTCCGAGCGGGCTCTTGAAAATATGCAGGTGCTGAAGCAGTCCCGGCT
GAGTGTGACGCCAGTAAGCGTCACAGAATGGGCGTTTATCATGCGGGTAG
CGGACGAAAACGAGGCCAAGGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000785chromatin
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126341ASPNIDRAFT_126341Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126341-T1.exon1ASPNIDRAFT_126341-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_126341-T1.exon2ASPNIDRAFT_126341-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_126341-T1.exon3ASPNIDRAFT_126341-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_126341-T1.exon4ASPNIDRAFT_126341-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126341-T1.cdsASPNIDRAFT_126341-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126341-T1ASPNIDRAFT_126341-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR015947
DBxrefInterPro:IPR002740
DBxrefInterPro:IPR000116
DBxrefInterPro:IPR017956
DBxrefPFAM:PF01878
DBxrefPFAM:PF02178
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:869114..870188 +
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