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ASPNIDRAFT_126717-T1, ASPNIDRAFT_126717-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_126717-T1
Unique NameASPNIDRAFT_126717-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:54541..55550-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_126717-T1 ID=ASPNIDRAFT_126717-T1|Name=ASPNIDRAFT_126717-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1010bp|location=Sequence derived from alignment at ACJE01000006.1:54541..55550- (Aspergillus niger ATCC 1015)
CTGTCACTTCTCTCAGCTGCTCTTGCGGATATCGAATTCATCGACCCAGC
AGCCGGCACAGTCATCAGAGCTGGGGATGAGTTTACTGCTCACTGGAGGG
ATTCCGGCACATTACCCCGGCTTGCTTCACTCGTACAGTATGACCTCTAT
CTTTGTGCAGGCGGAGACACAGTGGGATCCCATGTGCGTGCTCTGTCAAT
ATTCTCGCCCCTTAAGCAAACTCTACTAATACCCACGTCTTTGATACAGG
AGGACATAGCTCTCCTCGCGAAAAACGCGCTTTTTGCCAAGGGCAACTCA
GTTACGTTTAAGATTGATTCCGAGGTTGGCGGCAATGATGCAAACGCATA
GTAAGGCTTCTTCCATAGCTCCCATGAAACGCGACAGCAGGTTTCGACCT
CAGCTGTAACGTCCCTTTCACTGCTGACAATTGCACCTCGTGCAGCTTCC
TTAGGATTGCCGCTTCTGGTCCTGATGCCTCTGTTGTCAACTACTCGGAT
CGCTTCACCCTCACGAACATGACCGGATCATTCTCCCCGACGGTTATCAA
TGGAATCCCTTCCGCTATGTACCCTACAGACTCCTTTCCCCCGGCCCATA
TGGATGAAAGTCACGAAGAATTACGGAAGAGGCAGGTGGCTGGACCCTTT
ACGATTCCCTATCAGTTGCAGACTGGACCTACCAGATACGCACCCATGGC
TAAGAAGCCTGGAAGTACGATTCCGGTGGGAACACCAACCCCCCAATATC
CAACGAGCGCGTATTCCGTTGCTACAACGTATCTACCTCAGGCTACTGTT
CAGATGACACTGTCCGCCTCAGAAACATACTCCGTTATTAGCATTGAGAA
TACAGTAAGTATAGCGTGGCTGGGTTGTGTCACGATTGATTCTGTTCTTC
TCTTCTCAAAGCTTGCGAATCTGGGCTAATGGCACTTCATTTCACAGGCA
TCTCCAGCACCGCATGCCGGAGACACAAAAATGAAGCGGTTTTTGGAAAG
ATGGAAAGAT
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Coding sequence (CDS) from alignment at ACJE01000006.1:54541..55550-

>ASPNIDRAFT_126717-T1 ID=ASPNIDRAFT_126717-T1|Name=ASPNIDRAFT_126717-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3000bp|location=Sequence derived from alignment at ACJE01000006.1:54541..55550- (Aspergillus niger ATCC 1015)
GCATCTCCAGCACCGCATGCCGGAGACACAAAAATGAAGCGGTTTTTGGA
AAGATGGCTTCCTTAGGATTGCCGCTTCTGGTCCTGATGCCTCTGTTGTC
AACTACTCGGATCGCTTCACCCTCACGAACATGACCGGATCATTCTCCCC
GACGGTTATCAATGGAATCCCTTCCGCTATGTACCCTACAGACTCCTTTC
CCCCGGCCCATATGGATGAAAGTCACGAAGAATTACGGAAGAGGCAGGTG
GCTGGACCCTTTACGATTCCCTATCAGTTGCAGACTGGACCTACCAGATA
CGCACCCATGGCTAAGAAGCCTGGAAGTACGATTCCGGTGGGAACACCAA
CCCCCCAATATCCAACGAGCGCGTATTCCGTTGCTACAACGTATCTACCT
CAGGCTACTGTTCAGATGACACTGTCCGCCTCAGAAACATACTCCGTTAT
TAGCATTGAGAATACAGAGGACATAGCTCTCCTCGCGAAAAACGCGCTTT
TTGCCAAGGGCAACTCAGTTACGTTTAAGATTGATTCCGAGGTTGGCGGC
AATGATGCAAACGCATACTGTCACTTCTCTCAGCTGCTCTTGCGGATATC
GAATTCATCGACCCAGCAGCCGGCACAGTCATCAGAGCTGGGGATGAGTT
TACTGCTCACTGGAGGGATTCCGGCACATTACCCCGGCTTGCTTCACTCG
TACAGTATGACCTCTATCTTTGTGCAGGCGGAGACACAGTGGGATCCCAT
GCATCTCCAGCACCGCATGCCGGAGACACAAAAATGAAGCGGTTTTTGGA
AAGATGGCTTCCTTAGGATTGCCGCTTCTGGTCCTGATGCCTCTGTTGTC
AACTACTCGGATCGCTTCACCCTCACGAACATGACCGGATCATTCTCCCC
GACGGTTATCAATGGAATCCCTTCCGCTATGTACCCTACAGACTCCTTTC
CCCCGGCCCATATGGATGAAAGTCACGAAGAATTACGGAAGAGGCAGGTG
GCTGGACCCTTTACGATTCCCTATCAGTTGCAGACTGGACCTACCAGATA
CGCACCCATGGCTAAGAAGCCTGGAAGTACGATTCCGGTGGGAACACCAA
CCCCCCAATATCCAACGAGCGCGTATTCCGTTGCTACAACGTATCTACCT
CAGGCTACTGTTCAGATGACACTGTCCGCCTCAGAAACATACTCCGTTAT
TAGCATTGAGAATACAGAGGACATAGCTCTCCTCGCGAAAAACGCGCTTT
TTGCCAAGGGCAACTCAGTTACGTTTAAGATTGATTCCGAGGTTGGCGGC
AATGATGCAAACGCATACTGTCACTTCTCTCAGCTGCTCTTGCGGATATC
GAATTCATCGACCCAGCAGCCGGCACAGTCATCAGAGCTGGGGATGAGTT
TACTGCTCACTGGAGGGATTCCGGCACATTACCCCGGCTTGCTTCACTCG
TACAGTATGACCTCTATCTTTGTGCAGGCGGAGACACAGTGGGATCCCAT
GCATCTCCAGCACCGCATGCCGGAGACACAAAAATGAAGCGGTTTTTGGA
AAGATGGCTTCCTTAGGATTGCCGCTTCTGGTCCTGATGCCTCTGTTGTC
AACTACTCGGATCGCTTCACCCTCACGAACATGACCGGATCATTCTCCCC
GACGGTTATCAATGGAATCCCTTCCGCTATGTACCCTACAGACTCCTTTC
CCCCGGCCCATATGGATGAAAGTCACGAAGAATTACGGAAGAGGCAGGTG
GCTGGACCCTTTACGATTCCCTATCAGTTGCAGACTGGACCTACCAGATA
CGCACCCATGGCTAAGAAGCCTGGAAGTACGATTCCGGTGGGAACACCAA
CCCCCCAATATCCAACGAGCGCGTATTCCGTTGCTACAACGTATCTACCT
CAGGCTACTGTTCAGATGACACTGTCCGCCTCAGAAACATACTCCGTTAT
TAGCATTGAGAATACAGAGGACATAGCTCTCCTCGCGAAAAACGCGCTTT
TTGCCAAGGGCAACTCAGTTACGTTTAAGATTGATTCCGAGGTTGGCGGC
AATGATGCAAACGCATACTGTCACTTCTCTCAGCTGCTCTTGCGGATATC
GAATTCATCGACCCAGCAGCCGGCACAGTCATCAGAGCTGGGGATGAGTT
TACTGCTCACTGGAGGGATTCCGGCACATTACCCCGGCTTGCTTCACTCG
TACAGTATGACCTCTATCTTTGTGCAGGCGGAGACACAGTGGGATCCCAT
GCATCTCCAGCACCGCATGCCGGAGACACAAAAATGAAGCGGTTTTTGGA
AAGATGGCTTCCTTAGGATTGCCGCTTCTGGTCCTGATGCCTCTGTTGTC
AACTACTCGGATCGCTTCACCCTCACGAACATGACCGGATCATTCTCCCC
GACGGTTATCAATGGAATCCCTTCCGCTATGTACCCTACAGACTCCTTTC
CCCCGGCCCATATGGATGAAAGTCACGAAGAATTACGGAAGAGGCAGGTG
GCTGGACCCTTTACGATTCCCTATCAGTTGCAGACTGGACCTACCAGATA
CGCACCCATGGCTAAGAAGCCTGGAAGTACGATTCCGGTGGGAACACCAA
CCCCCCAATATCCAACGAGCGCGTATTCCGTTGCTACAACGTATCTACCT
CAGGCTACTGTTCAGATGACACTGTCCGCCTCAGAAACATACTCCGTTAT
TAGCATTGAGAATACAGAGGACATAGCTCTCCTCGCGAAAAACGCGCTTT
TTGCCAAGGGCAACTCAGTTACGTTTAAGATTGATTCCGAGGTTGGCGGC
AATGATGCAAACGCATACTGTCACTTCTCTCAGCTGCTCTTGCGGATATC
GAATTCATCGACCCAGCAGCCGGCACAGTCATCAGAGCTGGGGATGAGTT
TACTGCTCACTGGAGGGATTCCGGCACATTACCCCGGCTTGCTTCACTCG
TACAGTATGACCTCTATCTTTGTGCAGGCGGAGACACAGTGGGATCCCAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042546cell wall biogenesis
GO:0006078(1->6)-beta-D-glucan biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126717ASPNIDRAFT_126717Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126717-T1ASPNIDRAFT_126717-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126717-T1.cdsASPNIDRAFT_126717-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126717-T1.utr3p1ASPNIDRAFT_126717-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_126717-T1.exon4ASPNIDRAFT_126717-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_126717-T1.exon3ASPNIDRAFT_126717-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_126717-T1.exon2ASPNIDRAFT_126717-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_126717-T1.exon1ASPNIDRAFT_126717-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR018466
DBxrefInterPro:IPR008659
DBxrefPFAM:PF05390
DBxrefPFAM:PF10342
Productcell wall biosynthesis protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:54541..55550 -
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