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ASPNIDRAFT_127027-T1, ASPNIDRAFT_127027-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_127027-T1
Unique NameASPNIDRAFT_127027-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:529879..530812+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_127027-T1 ID=ASPNIDRAFT_127027-T1|Name=ASPNIDRAFT_127027-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=934bp|location=Sequence derived from alignment at ACJE01000006.1:529879..530812+ (Aspergillus niger ATCC 1015)
GCTCACAGGCCCACGTTCGATCCCGTATGTACCCCCGATCATCTGCTCAG
CGCATGAAGCTCATTGAAACAGGCACAAGGAAAGGAGGCCCTCCGCGGCC
CTGCGTACCACCAGCGTCTTCTCCCGGCTTATACGCACCTGAAGACACGG
TAAGTGGTATGACAATATGTCTGCGACAATTTCTGACATGTCCAAGTCAA
TTCGGTCAGGGTAGTGAAGTCGAAACCCAGCAACGCGATCTGCGCGCCGA
GCTGCTCCAGGCGGAGGCTGCTCATTTCGCCAAGAAGAACGGAGTTCCCG
TGGACGAGCCTAAAGTCGAGACCGCCACACCCAAGCGCCAGTTGGAAGGT
GGTTCACCCGGCGGTGATGCAGGGACAGAGGAAGAAGATCCAGAAGCCAA
ACGACGACGAATACTAGAGGAGACTCGAGATATAGATGCAGATTCCGATG
AATCGGAGGAGGATAGCAGTGAAGATGAAAGGTCAGACTCGCGAATATAT
TAGATTCGCGCGATAATACTGACAGGTTACAGTGACGATGAAGAGGACGA
AGCTGCTGAATTGATGCGCGAGCTGGAGAAAATTAAGAAAGAGAGGCTCG
AGCAGAAGGAGAAAGAGGTTTGTACATTGGTTTTTGACTTTGACATGGTT
TACTGATATTTGTCAGGAACGCGAGCGTGCTGCGCAAGAAGAGGAGCAGC
GCGAGGTCGATATCGCTCGAGGAAACCCGCTGCTTAATCCTCAAGACTTC
AATGTGAAGCGGAGATGGGACGATGATGTTGTGTTCAAGAACCAGGCCCG
TGGTACAGAAGACAAGAGGGGCAAAGAGTTTGTTAACGTAAGTGCTTGCT
TTTTTATCATCTATTATGCTATGATACTAATCTTGCATGCAGGATCTGTT
GCGATCGGACTTCCACAAGAGATTCATGGTGAGT
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Coding sequence (CDS) from alignment at ACJE01000006.1:529879..530812+

>ASPNIDRAFT_127027-T1 ID=ASPNIDRAFT_127027-T1|Name=ASPNIDRAFT_127027-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4086bp|location=Sequence derived from alignment at ACJE01000006.1:529879..530812+ (Aspergillus niger ATCC 1015)
GCTCACAGGCCCACGTTCGATCCCGCACAAGGAAAGGAGGCCCTCCGCGG
CCCTGCGTACCACCAGCGTCTTCTCCCGGCTTATACGCACCTGAAGACAC
GTCAATTCGGTCAGGGTAGTGAAGTCGAAACCCAGCAACGCGATCTGCGC
GCCGAGCTGCTCCAGGCGGAGGCTGCTCATTTCGCCAAGAAGAACGGAGT
TCCCGTGGACGAGCCTAAAGTCGAGACCGCCACACCCAAGCGCCAGTTGG
AAGGTGGTTCACCCGGCGGTGATGCAGGGACAGAGGAAGAAGATCCAGAA
GCCAAACGACGACGAATACTAGAGGAGACTCGAGATATAGATGCAGATTC
CGATGAATCGGAGGAGGATAGCAGTGAAGATGAAAGTGACGATGAAGAGG
ACGAAGCTGCTGAATTGATGCGCGAGCTGGAGAAAATTAAGAAAGAGAGG
CTCGAGCAGAAGGAGAAAGAGGAACGCGAGCGTGCTGCGCAAGAAGAGGA
GCAGCGCGAGGTCGATATCGCTCGAGGAAACCCGCTGCTTAATCCTCAAG
ACTTCAATGTGAAGCGGAGATGGGACGATGATGTTGTGTTCAAGAACCAG
GCCCGTGGTACAGAAGACAAGAGGGGCAAAGAGTTTGTTAACGATCTGTT
GCGATCGGACTTCCACAAGAGATTCATGGTGGCTCACAGGCCCACGTTCG
ATCCCGCACAAGGAAAGGAGGCCCTCCGCGGCCCTGCGTACCACCAGCGT
CTTCTCCCGGCTTATACGCACCTGAAGACACGTCAATTCGGTCAGGGTAG
TGAAGTCGAAACCCAGCAACGCGATCTGCGCGCCGAGCTGCTCCAGGCGG
AGGCTGCTCATTTCGCCAAGAAGAACGGAGTTCCCGTGGACGAGCCTAAA
GTCGAGACCGCCACACCCAAGCGCCAGTTGGAAGGTGGTTCACCCGGCGG
TGATGCAGGGACAGAGGAAGAAGATCCAGAAGCCAAACGACGACGAATAC
TAGAGGAGACTCGAGATATAGATGCAGATTCCGATGAATCGGAGGAGGAT
AGCAGTGAAGATGAAAGTGACGATGAAGAGGACGAAGCTGCTGAATTGAT
GCGCGAGCTGGAGAAAATTAAGAAAGAGAGGCTCGAGCAGAAGGAGAAAG
AGGAACGCGAGCGTGCTGCGCAAGAAGAGGAGCAGCGCGAGGTCGATATC
GCTCGAGGAAACCCGCTGCTTAATCCTCAAGACTTCAATGTGAAGCGGAG
ATGGGACGATGATGTTGTGTTCAAGAACCAGGCCCGTGGTACAGAAGACA
AGAGGGGCAAAGAGTTTGTTAACGATCTGTTGCGATCGGACTTCCACAAG
AGATTCATGGTGGCTCACAGGCCCACGTTCGATCCCGCACAAGGAAAGGA
GGCCCTCCGCGGCCCTGCGTACCACCAGCGTCTTCTCCCGGCTTATACGC
ACCTGAAGACACGTCAATTCGGTCAGGGTAGTGAAGTCGAAACCCAGCAA
CGCGATCTGCGCGCCGAGCTGCTCCAGGCGGAGGCTGCTCATTTCGCCAA
GAAGAACGGAGTTCCCGTGGACGAGCCTAAAGTCGAGACCGCCACACCCA
AGCGCCAGTTGGAAGGTGGTTCACCCGGCGGTGATGCAGGGACAGAGGAA
GAAGATCCAGAAGCCAAACGACGACGAATACTAGAGGAGACTCGAGATAT
AGATGCAGATTCCGATGAATCGGAGGAGGATAGCAGTGAAGATGAAAGTG
ACGATGAAGAGGACGAAGCTGCTGAATTGATGCGCGAGCTGGAGAAAATT
AAGAAAGAGAGGCTCGAGCAGAAGGAGAAAGAGGAACGCGAGCGTGCTGC
GCAAGAAGAGGAGCAGCGCGAGGTCGATATCGCTCGAGGAAACCCGCTGC
TTAATCCTCAAGACTTCAATGTGAAGCGGAGATGGGACGATGATGTTGTG
TTCAAGAACCAGGCCCGTGGTACAGAAGACAAGAGGGGCAAAGAGTTTGT
TAACGATCTGTTGCGATCGGACTTCCACAAGAGATTCATGGTGGCTCACA
GGCCCACGTTCGATCCCGCACAAGGAAAGGAGGCCCTCCGCGGCCCTGCG
TACCACCAGCGTCTTCTCCCGGCTTATACGCACCTGAAGACACGTCAATT
CGGTCAGGGTAGTGAAGTCGAAACCCAGCAACGCGATCTGCGCGCCGAGC
TGCTCCAGGCGGAGGCTGCTCATTTCGCCAAGAAGAACGGAGTTCCCGTG
GACGAGCCTAAAGTCGAGACCGCCACACCCAAGCGCCAGTTGGAAGGTGG
TTCACCCGGCGGTGATGCAGGGACAGAGGAAGAAGATCCAGAAGCCAAAC
GACGACGAATACTAGAGGAGACTCGAGATATAGATGCAGATTCCGATGAA
TCGGAGGAGGATAGCAGTGAAGATGAAAGTGACGATGAAGAGGACGAAGC
TGCTGAATTGATGCGCGAGCTGGAGAAAATTAAGAAAGAGAGGCTCGAGC
AGAAGGAGAAAGAGGAACGCGAGCGTGCTGCGCAAGAAGAGGAGCAGCGC
GAGGTCGATATCGCTCGAGGAAACCCGCTGCTTAATCCTCAAGACTTCAA
TGTGAAGCGGAGATGGGACGATGATGTTGTGTTCAAGAACCAGGCCCGTG
GTACAGAAGACAAGAGGGGCAAAGAGTTTGTTAACGATCTGTTGCGATCG
GACTTCCACAAGAGATTCATGGTGGCTCACAGGCCCACGTTCGATCCCGC
ACAAGGAAAGGAGGCCCTCCGCGGCCCTGCGTACCACCAGCGTCTTCTCC
CGGCTTATACGCACCTGAAGACACGTCAATTCGGTCAGGGTAGTGAAGTC
GAAACCCAGCAACGCGATCTGCGCGCCGAGCTGCTCCAGGCGGAGGCTGC
TCATTTCGCCAAGAAGAACGGAGTTCCCGTGGACGAGCCTAAAGTCGAGA
CCGCCACACCCAAGCGCCAGTTGGAAGGTGGTTCACCCGGCGGTGATGCA
GGGACAGAGGAAGAAGATCCAGAAGCCAAACGACGACGAATACTAGAGGA
GACTCGAGATATAGATGCAGATTCCGATGAATCGGAGGAGGATAGCAGTG
AAGATGAAAGTGACGATGAAGAGGACGAAGCTGCTGAATTGATGCGCGAG
CTGGAGAAAATTAAGAAAGAGAGGCTCGAGCAGAAGGAGAAAGAGGAACG
CGAGCGTGCTGCGCAAGAAGAGGAGCAGCGCGAGGTCGATATCGCTCGAG
GAAACCCGCTGCTTAATCCTCAAGACTTCAATGTGAAGCGGAGATGGGAC
GATGATGTTGTGTTCAAGAACCAGGCCCGTGGTACAGAAGACAAGAGGGG
CAAAGAGTTTGTTAACGATCTGTTGCGATCGGACTTCCACAAGAGATTCA
TGGTGGCTCACAGGCCCACGTTCGATCCCGCACAAGGAAAGGAGGCCCTC
CGCGGCCCTGCGTACCACCAGCGTCTTCTCCCGGCTTATACGCACCTGAA
GACACGTCAATTCGGTCAGGGTAGTGAAGTCGAAACCCAGCAACGCGATC
TGCGCGCCGAGCTGCTCCAGGCGGAGGCTGCTCATTTCGCCAAGAAGAAC
GGAGTTCCCGTGGACGAGCCTAAAGTCGAGACCGCCACACCCAAGCGCCA
GTTGGAAGGTGGTTCACCCGGCGGTGATGCAGGGACAGAGGAAGAAGATC
CAGAAGCCAAACGACGACGAATACTAGAGGAGACTCGAGATATAGATGCA
GATTCCGATGAATCGGAGGAGGATAGCAGTGAAGATGAAAGTGACGATGA
AGAGGACGAAGCTGCTGAATTGATGCGCGAGCTGGAGAAAATTAAGAAAG
AGAGGCTCGAGCAGAAGGAGAAAGAGGAACGCGAGCGTGCTGCGCAAGAA
GAGGAGCAGCGCGAGGTCGATATCGCTCGAGGAAACCCGCTGCTTAATCC
TCAAGACTTCAATGTGAAGCGGAGATGGGACGATGATGTTGTGTTCAAGA
ACCAGGCCCGTGGTACAGAAGACAAGAGGGGCAAAGAGTTTGTTAACGAT
CTGTTGCGATCGGACTTCCACAAGAGATTCATGGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005681spliceosomal complex
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CWC15ASPNIDRAFT_127027Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127027-T1ASPNIDRAFT_127027-T1-proteinAspergillus niger ATCC 1015polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127027-T1.exon1ASPNIDRAFT_127027-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_127027-T1.exon2ASPNIDRAFT_127027-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_127027-T1.exon3ASPNIDRAFT_127027-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_127027-T1.exon4ASPNIDRAFT_127027-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_127027-T1.exon5ASPNIDRAFT_127027-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_127027-T1.exon6ASPNIDRAFT_127027-T1.exon6Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127027-T1.cdsASPNIDRAFT_127027-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127027-T1.utr3p1ASPNIDRAFT_127027-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR006973
DBxrefPFAM:PF04889
Productcomplexed with cef1p
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:529879..530812 +
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