You are here

Home

ASPNIDRAFT_137016-T1, ASPNIDRAFT_137016-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_137016-T1
Unique NameASPNIDRAFT_137016-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:3292677..3293436-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_137016-T1 ID=ASPNIDRAFT_137016-T1|Name=ASPNIDRAFT_137016-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=760bp|location=Sequence derived from alignment at ACJE01000021.1:3292677..3293436- (Aspergillus niger ATCC 1015)
TTCATCGTGACCGGTGGAGCCTCTGGAATTGGCCTAGAGATTGTCAACGA
GCTCCTTCGTCAGTCAGCCACGGTGCACGTTCTGGACATCTCCTCGAAGT
TCCCTGAAACATCCCAAGCTCTACAGCATCGACTGCATTTCTACCCGGCG
ACCGATGTGAGCTCGCGAGAAAGTGTCAGCCGGACCATCAAGATAATCAT
TCAGAAGTGCCCCGACATCCACGGCCTCGTCAACTGTGCTGGTGTCTACC
GACAAAGCGCCTCCGTCATTGATTCCGACGAGAACTTCCACAAGGTTATG
TCGGTTAATCTCGATGGGGTTTGGAACACGGGGACGGAGTACCTTCGCTA
CGTTCTGGACAAGGGGGCTAACGATCCTACCCGCAGTCAACCCGAGCAAG
GGCCAGGATCAGTTGAAAAGTGCGCAGGCAGCGGCACCAGTAGCTGCAGC
ATGGTAAACATTGGCTCCACCATCGTGCTGCAGGGGCTTCCAGGGATGGC
AGCGTATGCGGCTAGTAAGCATGCCATTGTGGGCCTAACGAGGGGTGAGA
ATCAACTGCGTCGCCCCTGGTGTCACAGATACCCCATTACTCAGACAACA
TTACACTGAGGCAAGCATTGCGGAGAACTGGCTGAGTACCATTCCCATGG
GTAGGGTGGGGAGCTGCAAGGAGGTTGCTAATGCGGTTGTTTTCCTTCTG
GGCGATGCTTCCAGCTATATCACCGGTCAAGTCCTGGCGGTTAGTGGCGG
ATTTCCATAA
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:3292677..3293436-

>ASPNIDRAFT_137016-T1 ID=ASPNIDRAFT_137016-T1|Name=ASPNIDRAFT_137016-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1989bp|location=Sequence derived from alignment at ACJE01000021.1:3292677..3293436- (Aspergillus niger ATCC 1015)
GGGTGAGAATCAACTGCGTCGCCCCTGGTGTCACAGATACCCCATTACTC
AGACAACATTACACTGAGGCAAGCATTGCGGAGAACTGGCTGAGTACCAT
TCCCATGGGTAGGGTGGGGAGCTGCAAGGAGGTTGCTAATGCGGTTGTTT
TCCTTCTGGGCGATGCTTCCAGCTATATCACCGGTCAAGTCCTGGCGGTT
AGTGGCGGATTTCCATAATGCGCAGGCAGCGGCACCAGTAGCTGCAGCAT
GGTAAACATTGGCTCCACCATCGTGCTGCAGGGGCTTCCAGGGATGGCAG
CGTATGCGGCTATTCATCGTGACCGGTGGAGCCTCTGGAATTGGCCTAGA
GATTGTCAACGAGCTCCTTCGTCAGTCAGCCACGGTGCACGTTCTGGACA
TCTCCTCGAAGTTCCCTGAAACATCCCAAGCTCTACAGCATCGACTGCAT
TTCTACCCGGCGACCGATGTGAGCTCGCGAGAAAGTGTCAGCCGGACCAT
CAAGATAATCATTCAGAAGTGCCCCGACATCCACGGCCTCGTCAACTGTG
CTGGTGTCTACCGACAAAGCGCCTCCGTCATTGATTCCGACGAGAACTTC
CACAAGGTTATGTCGGTTAATCTCGATGGGGTTTGGAACACGGGGACGGA
GTACCTTCGCTACGGGTGAGAATCAACTGCGTCGCCCCTGGTGTCACAGA
TACCCCATTACTCAGACAACATTACACTGAGGCAAGCATTGCGGAGAACT
GGCTGAGTACCATTCCCATGGGTAGGGTGGGGAGCTGCAAGGAGGTTGCT
AATGCGGTTGTTTTCCTTCTGGGCGATGCTTCCAGCTATATCACCGGTCA
AGTCCTGGCGGTTAGTGGCGGATTTCCATAATGCGCAGGCAGCGGCACCA
GTAGCTGCAGCATGGTAAACATTGGCTCCACCATCGTGCTGCAGGGGCTT
CCAGGGATGGCAGCGTATGCGGCTATTCATCGTGACCGGTGGAGCCTCTG
GAATTGGCCTAGAGATTGTCAACGAGCTCCTTCGTCAGTCAGCCACGGTG
CACGTTCTGGACATCTCCTCGAAGTTCCCTGAAACATCCCAAGCTCTACA
GCATCGACTGCATTTCTACCCGGCGACCGATGTGAGCTCGCGAGAAAGTG
TCAGCCGGACCATCAAGATAATCATTCAGAAGTGCCCCGACATCCACGGC
CTCGTCAACTGTGCTGGTGTCTACCGACAAAGCGCCTCCGTCATTGATTC
CGACGAGAACTTCCACAAGGTTATGTCGGTTAATCTCGATGGGGTTTGGA
ACACGGGGACGGAGTACCTTCGCTACGGGTGAGAATCAACTGCGTCGCCC
CTGGTGTCACAGATACCCCATTACTCAGACAACATTACACTGAGGCAAGC
ATTGCGGAGAACTGGCTGAGTACCATTCCCATGGGTAGGGTGGGGAGCTG
CAAGGAGGTTGCTAATGCGGTTGTTTTCCTTCTGGGCGATGCTTCCAGCT
ATATCACCGGTCAAGTCCTGGCGGTTAGTGGCGGATTTCCATAATGCGCA
GGCAGCGGCACCAGTAGCTGCAGCATGGTAAACATTGGCTCCACCATCGT
GCTGCAGGGGCTTCCAGGGATGGCAGCGTATGCGGCTATTCATCGTGACC
GGTGGAGCCTCTGGAATTGGCCTAGAGATTGTCAACGAGCTCCTTCGTCA
GTCAGCCACGGTGCACGTTCTGGACATCTCCTCGAAGTTCCCTGAAACAT
CCCAAGCTCTACAGCATCGACTGCATTTCTACCCGGCGACCGATGTGAGC
TCGCGAGAAAGTGTCAGCCGGACCATCAAGATAATCATTCAGAAGTGCCC
CGACATCCACGGCCTCGTCAACTGTGCTGGTGTCTACCGACAAAGCGCCT
CCGTCATTGATTCCGACGAGAACTTCCACAAGGTTATGTCGGTTAATCTC
GATGGGGTTTGGAACACGGGGACGGAGTACCTTCGCTAC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_137016ASPNIDRAFT_137016Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_137016-T1ASPNIDRAFT_137016-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_137016-T1.cdsASPNIDRAFT_137016-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_137016-T1.exon3ASPNIDRAFT_137016-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_137016-T1.exon2ASPNIDRAFT_137016-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_137016-T1.exon1ASPNIDRAFT_137016-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:3292677..3293436 -
Powered by Drupal