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ASPNIDRAFT_137276-T1, ASPNIDRAFT_137276-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_137276-T1
Unique NameASPNIDRAFT_137276-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:654180..655001-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_137276-T1 ID=ASPNIDRAFT_137276-T1|Name=ASPNIDRAFT_137276-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=822bp|location=Sequence derived from alignment at ACJE01000021.1:654180..655001- (Aspergillus niger ATCC 1015)
AACCCCAAGCTAGCAAATGTCAAAGATGACGATGATCGCCTTCCCATCCA
CTGGGCGGTAGCATACAACCGTCTCCCGATTGTGGAGCTACTGACATCCA
ACAAGCACTTTGATCCCGATGTCGAGGTCCGTTATTGTCTCATCTTTTGT
AATGTACCACGCCAGAACATCACTAATATTTCCATAGGATGGCTCCGGCT
GGACACCACTCATGATTGCATCTAGCTTGAAGAACGCCGAAGGCGATCCC
ATCATCGATCTCCTCCTCAAGAAAGGCGCAGACGTCAGCACGAAGAGCGT
CTCGGGCCAGGTACTTCCCGTCCCTTCCTCCTAGGCCACCTTTTCCCTAA
CTTAATATCTGTGTCTACAATAGAACGCCCTCCACTTTGCAACTTCCAAA
GCCAACCTCTCCACCGTCCGCACCCTCATCGCCAACAAATGCAGCGCAAG
AGTAAAGGATAGACGCGGACAGCTGCCTCTGCACCGAGCAGCGGCGATTG
GATCCTCGCCTATCATCAAGATCCTTCTGGAGGAGGGGAAGAGTCCCGTC
AATGCAACGGATGTTGATGGGCTGACAGCTTTACATCATGCCGTGTCAGA
GGGTCACGGCGATGCAGCGATTACGTTGCTCAAGGCTGGTGCGGAGGCAG
ATAAGAGGGATTCGAATGGTGTTTTGGCCATTGATATGGCGCCGGATAGC
AAGGTTCGTCTTCTTCCTTTTTTATCATATATAAATCGAGGTGGGAGTGT
GTGCTGATAGTGGTATGCGTATAGGTGCGGAGCTATATCCTGCAAACAGC
GGAGAGGGAGGGGATCGAGTTA
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Coding sequence (CDS) from alignment at ACJE01000021.1:654180..655001-

>ASPNIDRAFT_137276-T1 ID=ASPNIDRAFT_137276-T1|Name=ASPNIDRAFT_137276-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2456bp|location=Sequence derived from alignment at ACJE01000021.1:654180..655001- (Aspergillus niger ATCC 1015)
GTGCGGAGCTATATCCTGCAAACAGCGGAGAGGGAGGGGATCGAGTTAAC
GCCCTCCACTTTGCAACTTCCAAAGCCAACCTCTCCACCGTCCGCACCCT
CATCGCCAACAAATGCAGCGCAAGAGTAAAGGATAGACGCGGACAGCTGC
CTCTGCACCGAGCAGCGGCGATTGGATCCTCGCCTATCATCAAGATCCTT
CTGGAGGAGGGGAAGAGTCCCGTCAATGCAACGGATGTTGATGGGCTGAC
AGCTTTACATCATGCCGTGTCAGAGGGTCACGGCGATGCAGCGATTACGT
TGCTCAAGGCTGGTGCGGAGGCAGATAAGAGGGATTCGAATGGTGTTTTG
GCCATTGATATGGCGCCGGATAGCAAGGATGGCTCCGGCTGGACACCACT
CATGATTGCATCTAGCTTGAAGAACGCCGAAGGCGATCCCATCATCGATC
TCCTCCTCAAGAAAGGCGCAGACGTCAGCACGAAGAGCAACCCCAAGCTA
GCAAATGTCAAAGATGACGATGATCGCCTTCCCATCCACTGGGCGGTAGC
ATACAACCGTCTCCCGATTGTGGAGCTACTGACATCCAACAAGCACTTTG
ATCCCGATGTCGAGGTGCGGAGCTATATCCTGCAAACAGCGGAGAGGGAG
GGGATCGAGTTAACGCCCTCCACTTTGCAACTTCCAAAGCCAACCTCTCC
ACCGTCCGCACCCTCATCGCCAACAAATGCAGCGCAAGAGTAAAGGATAG
ACGCGGACAGCTGCCTCTGCACCGAGCAGCGGCGATTGGATCCTCGCCTA
TCATCAAGATCCTTCTGGAGGAGGGGAAGAGTCCCGTCAATGCAACGGAT
GTTGATGGGCTGACAGCTTTACATCATGCCGTGTCAGAGGGTCACGGCGA
TGCAGCGATTACGTTGCTCAAGGCTGGTGCGGAGGCAGATAAGAGGGATT
CGAATGGTGTTTTGGCCATTGATATGGCGCCGGATAGCAAGGATGGCTCC
GGCTGGACACCACTCATGATTGCATCTAGCTTGAAGAACGCCGAAGGCGA
TCCCATCATCGATCTCCTCCTCAAGAAAGGCGCAGACGTCAGCACGAAGA
GCAACCCCAAGCTAGCAAATGTCAAAGATGACGATGATCGCCTTCCCATC
CACTGGGCGGTAGCATACAACCGTCTCCCGATTGTGGAGCTACTGACATC
CAACAAGCACTTTGATCCCGATGTCGAGGTGCGGAGCTATATCCTGCAAA
CAGCGGAGAGGGAGGGGATCGAGTTAACGCCCTCCACTTTGCAACTTCCA
AAGCCAACCTCTCCACCGTCCGCACCCTCATCGCCAACAAATGCAGCGCA
AGAGTAAAGGATAGACGCGGACAGCTGCCTCTGCACCGAGCAGCGGCGAT
TGGATCCTCGCCTATCATCAAGATCCTTCTGGAGGAGGGGAAGAGTCCCG
TCAATGCAACGGATGTTGATGGGCTGACAGCTTTACATCATGCCGTGTCA
GAGGGTCACGGCGATGCAGCGATTACGTTGCTCAAGGCTGGTGCGGAGGC
AGATAAGAGGGATTCGAATGGTGTTTTGGCCATTGATATGGCGCCGGATA
GCAAGGATGGCTCCGGCTGGACACCACTCATGATTGCATCTAGCTTGAAG
AACGCCGAAGGCGATCCCATCATCGATCTCCTCCTCAAGAAAGGCGCAGA
CGTCAGCACGAAGAGCAACCCCAAGCTAGCAAATGTCAAAGATGACGATG
ATCGCCTTCCCATCCACTGGGCGGTAGCATACAACCGTCTCCCGATTGTG
GAGCTACTGACATCCAACAAGCACTTTGATCCCGATGTCGAGGTGCGGAG
CTATATCCTGCAAACAGCGGAGAGGGAGGGGATCGAGTTAACGCCCTCCA
CTTTGCAACTTCCAAAGCCAACCTCTCCACCGTCCGCACCCTCATCGCCA
ACAAATGCAGCGCAAGAGTAAAGGATAGACGCGGACAGCTGCCTCTGCAC
CGAGCAGCGGCGATTGGATCCTCGCCTATCATCAAGATCCTTCTGGAGGA
GGGGAAGAGTCCCGTCAATGCAACGGATGTTGATGGGCTGACAGCTTTAC
ATCATGCCGTGTCAGAGGGTCACGGCGATGCAGCGATTACGTTGCTCAAG
GCTGGTGCGGAGGCAGATAAGAGGGATTCGAATGGTGTTTTGGCCATTGA
TATGGCGCCGGATAGCAAGGATGGCTCCGGCTGGACACCACTCATGATTG
CATCTAGCTTGAAGAACGCCGAAGGCGATCCCATCATCGATCTCCTCCTC
AAGAAAGGCGCAGACGTCAGCACGAAGAGCAACCCCAAGCTAGCAAATGT
CAAAGATGACGATGATCGCCTTCCCATCCACTGGGCGGTAGCATACAACC
GTCTCCCGATTGTGGAGCTACTGACATCCAACAAGCACTTTGATCCCGAT
GTCGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_137276ASPNIDRAFT_137276Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_137276-T1ASPNIDRAFT_137276-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_137276-T1.cdsASPNIDRAFT_137276-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_137276-T1.utr3p1ASPNIDRAFT_137276-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_137276-T1.exon4ASPNIDRAFT_137276-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_137276-T1.exon3ASPNIDRAFT_137276-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_137276-T1.exon2ASPNIDRAFT_137276-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_137276-T1.exon1ASPNIDRAFT_137276-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:654180..655001 -
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