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ASPNIDRAFT_137752-T1, ASPNIDRAFT_137752-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_137752-T1
Unique NameASPNIDRAFT_137752-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1002840..1003489-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_137752-T1 ID=ASPNIDRAFT_137752-T1|Name=ASPNIDRAFT_137752-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=650bp|location=Sequence derived from alignment at ACJE01000004.1:1002840..1003489- (Aspergillus niger ATCC 1015)
TTAGGGCGTCTCACCGAGTACCAGGTCATTGGGCGTCACCTGCCCACCGA
GGCTAACCCCACGCCCAAGCTGTACCGCATGCGCATCTTCGCGCCCAACA
CTGTTGTCGCTAAGTCCCGGTTCTGGTACTTCCTGACCCAGCTCCGCAAG
GTCAAGAAGGCCAACGGTGAGATCGTCAGCATCAATGTGGTATGTGTGGC
CGTTATCAAGCGACAACTCGGCAGTGTTGGCTGACGCCTGTCTTTTTTCC
CCATCCAATAGATCAGCGAGAAGCGCCCTACCAAGGTCAAGAACTTCGGT
ATCTGGCTCCGCTACGACTCCCGCTCCGGCACCCACAACATGTACAAGGA
GTTCCGTGAGATGAGCCGCACCGAGGCTGTTGAGGCTCTCTACCAGGACA
TGGCTGCCCGCCACCGTGCCCGCTTCGGCTCCATCCACGTATGTTGAGAT
TCCTATCCTCTTTTGCTGAGGAATATTGCGATCTAACTACGTTCCTACAG
ATCCTTAAGGTTGTTGAGATCGAGAACGCCGACAGCATCCGCCGCCCCTA
CATCAAGCAGCTCCTCTCCAAGAACCTCAAGTTCCCCCTGCCCCACCGTG
CTGCCCACGGCAAGAAGCTGTTCGCTTACTCTCGTCCCACTACTTTCGCG
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Coding sequence (CDS) from alignment at ACJE01000004.1:1002840..1003489-

>ASPNIDRAFT_137752-T1 ID=ASPNIDRAFT_137752-T1|Name=ASPNIDRAFT_137752-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1548bp|location=Sequence derived from alignment at ACJE01000004.1:1002840..1003489- (Aspergillus niger ATCC 1015)
ATCCTTAAGGTTGTTGAGATCGAGAACGCCGACAGCATCCGCCGCCCCTA
CATCAAGCAGCTCCTCTCCAAGAACCTCAAGTTCCCCCTGCCCCACCGTG
CTGCCCACGGCAAGAAGCTGTTCGCTTACTCTCGTCCCACTACTTTCGCG
ATCAGCGAGAAGCGCCCTACCAAGGTCAAGAACTTCGGTATCTGGCTCCG
CTACGACTCCCGCTCCGGCACCCACAACATGTACAAGGAGTTCCGTGAGA
TGAGCCGCACCGAGGCTGTTGAGGCTCTCTACCAGGACATGGCTGCCCGC
CACCGTGCCCGCTTCGGCTCCATCCACTTAGGGCGTCTCACCGAGTACCA
GGTCATTGGGCGTCACCTGCCCACCGAGGCTAACCCCACGCCCAAGCTGT
ACCGCATGCGCATCTTCGCGCCCAACACTGTTGTCGCTAAGTCCCGGTTC
TGGTACTTCCTGACCCAGCTCCGCAAGGTCAAGAAGGCCAACGGTGAGAT
CGTCAGCATCAATGTGATCCTTAAGGTTGTTGAGATCGAGAACGCCGACA
GCATCCGCCGCCCCTACATCAAGCAGCTCCTCTCCAAGAACCTCAAGTTC
CCCCTGCCCCACCGTGCTGCCCACGGCAAGAAGCTGTTCGCTTACTCTCG
TCCCACTACTTTCGCGATCAGCGAGAAGCGCCCTACCAAGGTCAAGAACT
TCGGTATCTGGCTCCGCTACGACTCCCGCTCCGGCACCCACAACATGTAC
AAGGAGTTCCGTGAGATGAGCCGCACCGAGGCTGTTGAGGCTCTCTACCA
GGACATGGCTGCCCGCCACCGTGCCCGCTTCGGCTCCATCCACTTAGGGC
GTCTCACCGAGTACCAGGTCATTGGGCGTCACCTGCCCACCGAGGCTAAC
CCCACGCCCAAGCTGTACCGCATGCGCATCTTCGCGCCCAACACTGTTGT
CGCTAAGTCCCGGTTCTGGTACTTCCTGACCCAGCTCCGCAAGGTCAAGA
AGGCCAACGGTGAGATCGTCAGCATCAATGTGATCCTTAAGGTTGTTGAG
ATCGAGAACGCCGACAGCATCCGCCGCCCCTACATCAAGCAGCTCCTCTC
CAAGAACCTCAAGTTCCCCCTGCCCCACCGTGCTGCCCACGGCAAGAAGC
TGTTCGCTTACTCTCGTCCCACTACTTTCGCGATCAGCGAGAAGCGCCCT
ACCAAGGTCAAGAACTTCGGTATCTGGCTCCGCTACGACTCCCGCTCCGG
CACCCACAACATGTACAAGGAGTTCCGTGAGATGAGCCGCACCGAGGCTG
TTGAGGCTCTCTACCAGGACATGGCTGCCCGCCACCGTGCCCGCTTCGGC
TCCATCCACTTAGGGCGTCTCACCGAGTACCAGGTCATTGGGCGTCACCT
GCCCACCGAGGCTAACCCCACGCCCAAGCTGTACCGCATGCGCATCTTCG
CGCCCAACACTGTTGTCGCTAAGTCCCGGTTCTGGTACTTCCTGACCCAG
CTCCGCAAGGTCAAGAAGGCCAACGGTGAGATCGTCAGCATCAATGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL20AASPNIDRAFT_137752Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_137752-T1ASPNIDRAFT_137752-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_137752-T1.cdsASPNIDRAFT_137752-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_137752-T1.exon3ASPNIDRAFT_137752-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_137752-T1.exon2ASPNIDRAFT_137752-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_137752-T1.exon1ASPNIDRAFT_137752-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR028877
DBxrefInterPro:IPR023573
DBxrefInterPro:IPR021138
DBxrefPFAM:PF01775
Product60S ribosomal protein L20A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1002840..1003489 -
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