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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000002.1:1039579..1040163+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_138062-T1 ID=ASPNIDRAFT_138062-T1|Name=ASPNIDRAFT_138062-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=585bp|location=Sequence derived from alignment at ACJE01000002.1:1039579..1040163+ (Aspergillus niger ATCC 1015)
GTTACGGAGGACAGTGTTTCCATCACCGATGAGTGCATCACCGCATTCAA
CGAGTTCCGCATGAGCGGCAACAGCAGGGGAAGCAAGACGAAGTTCATCA
TCTTCAAGATCGCCGACAACAAGAAGGAGGTTGTCATCGACGAGGTTTCC
CAGGACGAGGACTACGAGGTCTTCCGCGAAAAGCTCGCGGCCGCTAAGGA
TGCTAAGGGCAACCCCGCTCCCCGTTATGCAGTTTACGACGTCGAGTACG
ACCTGGGCGGTGGTGAAGGCAAGAGGTATGATGATGATGACGATAGCCGA
ACGTTTACTTTAGCATATCTGCTCACTTTCTTCTCACCACAGGAGCAAGA
TCATCTTCATTTCCTGGGTTCCCAGCGACACCGCTACCCTCGTACGTTCC
GCACCGTCTCAGTTGTTCAAGCCCCCAAATCATTGCTGACACCGATGAAA
CAGTGGTCCATGATCTACGCCAGCACTCGCGAGAACCTGAAGAACGCCCT
CAACATCCACACCTCCATCCACGCCGACGACAAGTCCGACATCGAGTGGA
AGACCGTCCTGGCCGAGGCCAGCGGTGGTAAGGCT back to topCoding sequence (CDS) from alignment at ACJE01000002.1:1039579..1040163+ >ASPNIDRAFT_138062-T1 ID=ASPNIDRAFT_138062-T1|Name=ASPNIDRAFT_138062-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1350bp|location=Sequence derived from alignment at ACJE01000002.1:1039579..1040163+ (Aspergillus niger ATCC 1015)
GTTACGGAGGACAGTGTTTCCATCACCGATGAGTGCATCACCGCATTCAA
CGAGTTCCGCATGAGCGGCAACAGCAGGGGAAGCAAGACGAAGTTCATCA
TCTTCAAGATCGCCGACAACAAGAAGGAGGTTGTCATCGACGAGGTTTCC
CAGGACGAGGACTACGAGGTCTTCCGCGAAAAGCTCGCGGCCGCTAAGGA
TGCTAAGGGCAACCCCGCTCCCCGTTATGCAGTTTACGACGTCGAGTACG
ACCTGGGCGGTGGTGAAGGCAAGAGGAGCAAGATCATCTTCATTTCCTGG
GTTCCCAGCGACACCGCTACCCTCTGGTCCATGATCTACGCCAGCACTCG
CGAGAACCTGAAGAACGCCCTCAACATCCACACCTCCATCCACGCCGACG
ACAAGTCCGACATCGAGTGGAAGACCGTCCTGGCCGAGGCCAGCGGTGGT
GTTACGGAGGACAGTGTTTCCATCACCGATGAGTGCATCACCGCATTCAA
CGAGTTCCGCATGAGCGGCAACAGCAGGGGAAGCAAGACGAAGTTCATCA
TCTTCAAGATCGCCGACAACAAGAAGGAGGTTGTCATCGACGAGGTTTCC
CAGGACGAGGACTACGAGGTCTTCCGCGAAAAGCTCGCGGCCGCTAAGGA
TGCTAAGGGCAACCCCGCTCCCCGTTATGCAGTTTACGACGTCGAGTACG
ACCTGGGCGGTGGTGAAGGCAAGAGGAGCAAGATCATCTTCATTTCCTGG
GTTCCCAGCGACACCGCTACCCTCTGGTCCATGATCTACGCCAGCACTCG
CGAGAACCTGAAGAACGCCCTCAACATCCACACCTCCATCCACGCCGACG
ACAAGTCCGACATCGAGTGGAAGACCGTCCTGGCCGAGGCCAGCGGTGGT
GTTACGGAGGACAGTGTTTCCATCACCGATGAGTGCATCACCGCATTCAA
CGAGTTCCGCATGAGCGGCAACAGCAGGGGAAGCAAGACGAAGTTCATCA
TCTTCAAGATCGCCGACAACAAGAAGGAGGTTGTCATCGACGAGGTTTCC
CAGGACGAGGACTACGAGGTCTTCCGCGAAAAGCTCGCGGCCGCTAAGGA
TGCTAAGGGCAACCCCGCTCCCCGTTATGCAGTTTACGACGTCGAGTACG
ACCTGGGCGGTGGTGAAGGCAAGAGGAGCAAGATCATCTTCATTTCCTGG
GTTCCCAGCGACACCGCTACCCTCTGGTCCATGATCTACGCCAGCACTCG
CGAGAACCTGAAGAACGCCCTCAACATCCACACCTCCATCCACGCCGACG
ACAAGTCCGACATCGAGTGGAAGACCGTCCTGGCCGAGGCCAGCGGTGGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0015629 | actin cytoskeleton |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0030042 | actin filament depolymerization |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003779 | actin binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017904 |
| DBxref | InterPro:IPR029006 |
| DBxref | InterPro:IPR002108 |
| DBxref | PFAM:PF00241 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000002.1 | supercontig | ACJE01000002.1:1039579..1040163 + |
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