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ASPNIDRAFT_138217-T1, ASPNIDRAFT_138217-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_138217-T1
Unique NameASPNIDRAFT_138217-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:3601618..3602391+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_138217-T1 ID=ASPNIDRAFT_138217-T1|Name=ASPNIDRAFT_138217-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=774bp|location=Sequence derived from alignment at ACJE01000010.1:3601618..3602391+ (Aspergillus niger ATCC 1015)
AGAATGAGCCGGAAGCTCGCCCCCGAAGCCAATCGGTAAGTTCTGCTCGC
CGAATCTTGCCCCTCTTCGGTCGCCCGCCATCTTTCAATTCCAGGCATTT
GTTCGGCACGTTGTTGGCTGGCAAACCTACGAGCCGGGCAAGTATCATAT
CTAAAGCATCGATGCTGACCGGTTTCAGGATTCTCTTTGTAAAGAACCTC
AAGTACGTCGATGATTTCCCAAGATTCGTTCCTCGACTCGCAAACCATCC
GTCGCATACCTGTCGACCAACAGCCAGCAGGCGACAGGCGCCCATCGTCT
TCCAAAATGCAAGAGCTAACCTGATTGTTTCCTTACAGCTACAACGTCAC
AGCTGAGCAACTCTTTGACCTCTTCGGCAAATTTGGTCCCATCCGGTAAA
TCTGCGCATGACTCACGTTCAGCCCACTTCTTGGTCAATAATGGCTAATT
GTTCCTGTTTCTTCCAGCCAAATACGTCAGGGAATCGCCAACAACTCGAA
GGGCACAGCCTTTGTGGTTTACGAAGACGTTCATGACGCCAAACAGGCAT
GCGATAAGCTCAATGGATTCAACTTCCAGAACAGATACCTCGTCGGTATG
TAACCCCGTGTCAAGGGGAGATGAAGCAGAGAATATATGGAGACAAGCCG
ATTGGCTGACATTTGTTTCTTTCTAGTTCTATATCACCAGCCTGAGAAAA
TGCTTAGGTCGAAAGAGGACTTGGCGGAAAGGCAAGAGAATTTGGAGCGT
CTCAAACAGCAACATGGGATAGAA
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Coding sequence (CDS) from alignment at ACJE01000010.1:3601618..3602391+

>ASPNIDRAFT_138217-T1 ID=ASPNIDRAFT_138217-T1|Name=ASPNIDRAFT_138217-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1680bp|location=Sequence derived from alignment at ACJE01000010.1:3601618..3602391+ (Aspergillus niger ATCC 1015)
AGAATGAGCCGGAAGCTCGCCCCCGAAGCCAATCGGATTCTCTTTGTAAA
GAACCTCAACTACAACGTCACAGCTGAGCAACTCTTTGACCTCTTCGGCA
AATTTGGTCCCATCCGCCAAATACGTCAGGGAATCGCCAACAACTCGAAG
GGCACAGCCTTTGTGGTTTACGAAGACGTTCATGACGCCAAACAGGCATG
CGATAAGCTCAATGGATTCAACTTCCAGAACAGATACCTCGTCGTTCTAT
ATCACCAGCCTGAGAAAATGCTTAGGTCGAAAGAGGACTTGGCGGAAAGG
CAAGAGAATTTGGAGCGTCTCAAACAGCAACATGGGAGAATGAGCCGGAA
GCTCGCCCCCGAAGCCAATCGGATTCTCTTTGTAAAGAACCTCAACTACA
ACGTCACAGCTGAGCAACTCTTTGACCTCTTCGGCAAATTTGGTCCCATC
CGCCAAATACGTCAGGGAATCGCCAACAACTCGAAGGGCACAGCCTTTGT
GGTTTACGAAGACGTTCATGACGCCAAACAGGCATGCGATAAGCTCAATG
GATTCAACTTCCAGAACAGATACCTCGTCGTTCTATATCACCAGCCTGAG
AAAATGCTTAGGTCGAAAGAGGACTTGGCGGAAAGGCAAGAGAATTTGGA
GCGTCTCAAACAGCAACATGGGAGAATGAGCCGGAAGCTCGCCCCCGAAG
CCAATCGGATTCTCTTTGTAAAGAACCTCAACTACAACGTCACAGCTGAG
CAACTCTTTGACCTCTTCGGCAAATTTGGTCCCATCCGCCAAATACGTCA
GGGAATCGCCAACAACTCGAAGGGCACAGCCTTTGTGGTTTACGAAGACG
TTCATGACGCCAAACAGGCATGCGATAAGCTCAATGGATTCAACTTCCAG
AACAGATACCTCGTCGTTCTATATCACCAGCCTGAGAAAATGCTTAGGTC
GAAAGAGGACTTGGCGGAAAGGCAAGAGAATTTGGAGCGTCTCAAACAGC
AACATGGGAGAATGAGCCGGAAGCTCGCCCCCGAAGCCAATCGGATTCTC
TTTGTAAAGAACCTCAACTACAACGTCACAGCTGAGCAACTCTTTGACCT
CTTCGGCAAATTTGGTCCCATCCGCCAAATACGTCAGGGAATCGCCAACA
ACTCGAAGGGCACAGCCTTTGTGGTTTACGAAGACGTTCATGACGCCAAA
CAGGCATGCGATAAGCTCAATGGATTCAACTTCCAGAACAGATACCTCGT
CGTTCTATATCACCAGCCTGAGAAAATGCTTAGGTCGAAAGAGGACTTGG
CGGAAAGGCAAGAGAATTTGGAGCGTCTCAAACAGCAACATGGGAGAATG
AGCCGGAAGCTCGCCCCCGAAGCCAATCGGATTCTCTTTGTAAAGAACCT
CAACTACAACGTCACAGCTGAGCAACTCTTTGACCTCTTCGGCAAATTTG
GTCCCATCCGCCAAATACGTCAGGGAATCGCCAACAACTCGAAGGGCACA
GCCTTTGTGGTTTACGAAGACGTTCATGACGCCAAACAGGCATGCGATAA
GCTCAATGGATTCAACTTCCAGAACAGATACCTCGTCGTTCTATATCACC
AGCCTGAGAAAATGCTTAGGTCGAAAGAGGACTTGGCGGAAAGGCAAGAG
AATTTGGAGCGTCTCAAACAGCAACATGGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_138217ASPNIDRAFT_138217Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_138217-T1ASPNIDRAFT_138217-T1-proteinAspergillus niger ATCC 1015polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_138217-T1.exon1ASPNIDRAFT_138217-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_138217-T1.exon2ASPNIDRAFT_138217-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_138217-T1.exon3ASPNIDRAFT_138217-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_138217-T1.exon4ASPNIDRAFT_138217-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_138217-T1.exon5ASPNIDRAFT_138217-T1.exon5Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_138217-T1.cdsASPNIDRAFT_138217-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_138217-T1.utr3p1ASPNIDRAFT_138217-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034150
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF13893
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:3601618..3602391 +
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