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ASPNIDRAFT_138231-T1, ASPNIDRAFT_138231-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_138231-T1
Unique NameASPNIDRAFT_138231-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:948152..948692-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_138231-T1 ID=ASPNIDRAFT_138231-T1|Name=ASPNIDRAFT_138231-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=541bp|location=Sequence derived from alignment at ACJE01000009.1:948152..948692- (Aspergillus niger ATCC 1015)
ATGCCGAGTTCCTGCCAAGAGATCAGTACGTTTGACCCTTATATCCTTTA
CCATACTCTTAAATTGCGGCTTGGATACTCGACGTATCCCCGAACGGAGA
TCACCACCTCATTGTCCCCAACTTCAGCTTCAGCTCCACACTCTCTAATC
AATCTCACCCGGATGAACAGGAAATGCTCTGGCCCAATGTCTCCAAGAAT
CAGACTGCATCATGGTGCAACGGCGCTCGCCCCGCGAATGTCTGAGTGAG
CCGTACGTCGACGAGCTTCCCATGCGATGCCAGCAATTGCGGAAGGGATT
CAGCGAGTGCAAGTGAGTAAAGAGCCGCTACCTTCTTGTAAAACGCAATC
ACCGCCAAGTCATCAGGGTTACTAACTGTTTGTCCTTCTATAGACGCGGC
CTGATCGATATGCGCAAGCGGTTCCGCGGAAACCAGCCCATCTCGGTATC
GACGACGGAAGGCGGCGGCTCCAGCTCGTCCCAGCAGCTATATGCGGGCA
AGCCGGCGTTTGAGACGGTCAAGGAAATTAGCGGTGATGAG
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Coding sequence (CDS) from alignment at ACJE01000009.1:948152..948692-

>ASPNIDRAFT_138231-T1 ID=ASPNIDRAFT_138231-T1|Name=ASPNIDRAFT_138231-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=939bp|location=Sequence derived from alignment at ACJE01000009.1:948152..948692- (Aspergillus niger ATCC 1015)
ACGCGGCCTGATCGATATGCGCAAGCGGTTCCGCGGAAACCAGCCCATCT
CGGTATCGACGACGGAAGGCGGCGGCTCCAGCTCGTCCCAGCAGCTATAT
GCGGGCAAGCCGGCGTTTGAGACGGTCAAGGAAATTAGCGGTGATGGAAA
TGCTCTGGCCCAATGTCTCCAAGAATCAGACTGCATCATGGTGCAACGGC
GCTCGCCCCGCGAATGTCTGAGTGAGCCGTACGTCGACGAGCTTCCCATG
CGATGCCAGCAATTGCGGAAGGGATTCAGCGAGTGCAAATGCCGAGTTCC
TGCCAAGAGATCAACGCGGCCTGATCGATATGCGCAAGCGGTTCCGCGGA
AACCAGCCCATCTCGGTATCGACGACGGAAGGCGGCGGCTCCAGCTCGTC
CCAGCAGCTATATGCGGGCAAGCCGGCGTTTGAGACGGTCAAGGAAATTA
GCGGTGATGGAAATGCTCTGGCCCAATGTCTCCAAGAATCAGACTGCATC
ATGGTGCAACGGCGCTCGCCCCGCGAATGTCTGAGTGAGCCGTACGTCGA
CGAGCTTCCCATGCGATGCCAGCAATTGCGGAAGGGATTCAGCGAGTGCA
AATGCCGAGTTCCTGCCAAGAGATCAACGCGGCCTGATCGATATGCGCAA
GCGGTTCCGCGGAAACCAGCCCATCTCGGTATCGACGACGGAAGGCGGCG
GCTCCAGCTCGTCCCAGCAGCTATATGCGGGCAAGCCGGCGTTTGAGACG
GTCAAGGAAATTAGCGGTGATGGAAATGCTCTGGCCCAATGTCTCCAAGA
ATCAGACTGCATCATGGTGCAACGGCGCTCGCCCCGCGAATGTCTGAGTG
AGCCGTACGTCGACGAGCTTCCCATGCGATGCCAGCAATTGCGGAAGGGA
TTCAGCGAGTGCAAATGCCGAGTTCCTGCCAAGAGATCA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_138231ASPNIDRAFT_138231Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_138231-T1ASPNIDRAFT_138231-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_138231-T1.cdsASPNIDRAFT_138231-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_138231-T1.utr3p1ASPNIDRAFT_138231-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_138231-T1.exon3ASPNIDRAFT_138231-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_138231-T1.exon2ASPNIDRAFT_138231-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_138231-T1.exon1ASPNIDRAFT_138231-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG09265I72
DBxrefInterPro:IPR018793
DBxrefPFAM:PF10203
Productcytochrome C oxidase assembly protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:948152..948692 -
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