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ASPNIDRAFT_138257-T1, ASPNIDRAFT_138257-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_138257-T1
Unique NameASPNIDRAFT_138257-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:611312..611905+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_138257-T1 ID=ASPNIDRAFT_138257-T1|Name=ASPNIDRAFT_138257-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=594bp|location=Sequence derived from alignment at ACJE01000016.1:611312..611905+ (Aspergillus niger ATCC 1015)
ATGCCTCAGGAAATCTCCGACATCAAGCAGTTCATCGAGGTCTGCCGCCG
CAAGGATGCGTCCTGTACGTTTACCCGACCTTTAGCCGCTTAGTTATCAT
GAGGTGGAAAGCTCCGCGGAGCTAGCTCTTTGAGGGGGAAGCTCGAGACG
GGTACCCGACTATCATCAAAAGGGCAAATTGGAATGGTTGATCGGGATGG
ATGAATGATAAGAAGTGGAGGCTAACGCGTGATGGTCTTGTCTTTCAAAC
AGCTGCTCGCATCAAGCGCAACCCCAAGGACCAGCAGATCAAGTTCAAGG
TCCGCTGCTCCCGCTTCGTCTACACCCTTGTCCTGAAGGACTCCGACAAG
GCCGACAAGCTCAAGCAGAGCCTGCCCCCTGGTGCGTTTGCTCCCGTCAC
CTGATCGACTGTTTCTTTGGATGGTGTTATGGAACAAGATACATGTCGTC
GGACGCGTTTGTTTCCTTACGACTTGAGATGGGCATTGATGTGGACCTCG
GCTATTGCATGACATCATTCGGATTGAGTACTAACATCAATTGTTTTCTC
ACACAGCTCTCAAGGTTGTCGACGTCTCCAAGGGAGACAAGAAG
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Coding sequence (CDS) from alignment at ACJE01000016.1:611312..611905+

>ASPNIDRAFT_138257-T1 ID=ASPNIDRAFT_138257-T1|Name=ASPNIDRAFT_138257-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=675bp|location=Sequence derived from alignment at ACJE01000016.1:611312..611905+ (Aspergillus niger ATCC 1015)
ATGCCTCAGGAAATCTCCGACATCAAGCAGTTCATCGAGGTCTGCCGCCG
CAAGGATGCGTCCTCTGCTCGCATCAAGCGCAACCCCAAGGACCAGCAGA
TCAAGTTCAAGGTCCGCTGCTCCCGCTTCGTCTACACCCTTGTCCTGAAG
GACTCCGACAAGGCCGACAAGCTCAAGCAGAGCCTGCCCCCTGCTCTCAA
GGTTGTCGACGTCTCCAAGGGAGACATGCCTCAGGAAATCTCCGACATCA
AGCAGTTCATCGAGGTCTGCCGCCGCAAGGATGCGTCCTCTGCTCGCATC
AAGCGCAACCCCAAGGACCAGCAGATCAAGTTCAAGGTCCGCTGCTCCCG
CTTCGTCTACACCCTTGTCCTGAAGGACTCCGACAAGGCCGACAAGCTCA
AGCAGAGCCTGCCCCCTGCTCTCAAGGTTGTCGACGTCTCCAAGGGAGAC
ATGCCTCAGGAAATCTCCGACATCAAGCAGTTCATCGAGGTCTGCCGCCG
CAAGGATGCGTCCTCTGCTCGCATCAAGCGCAACCCCAAGGACCAGCAGA
TCAAGTTCAAGGTCCGCTGCTCCCGCTTCGTCTACACCCTTGTCCTGAAG
GACTCCGACAAGGCCGACAAGCTCAAGCAGAGCCTGCCCCCTGCTCTCAA
GGTTGTCGACGTCTCCAAGGGAGAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL38ASPNIDRAFT_138257Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_138257-T1.exon1ASPNIDRAFT_138257-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_138257-T1.exon2ASPNIDRAFT_138257-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_138257-T1.exon3ASPNIDRAFT_138257-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_138257-T1.cdsASPNIDRAFT_138257-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_138257-T1.utr3p1ASPNIDRAFT_138257-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_138257-T1ASPNIDRAFT_138257-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265OQH
DBxrefInterPro:IPR002675
DBxrefInterPro:IPR038464
DBxrefPFAM:PF01781
Product60S ribosomal protein L38
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:611312..611905 +
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