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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000020.1:1009961..1011830- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_139419-T1 ID=ASPNIDRAFT_139419-T1|Name=ASPNIDRAFT_139419-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1870bp|location=Sequence derived from alignment at ACJE01000020.1:1009961..1011830- (Aspergillus niger ATCC 1015)
GAGCCCCCAGCCAAGAGGTCGCGCAAGCTGCTCGATGACGACAGCTCCAG
CGACTCAGGAGACGAGTCCGGCGGAGTTCCCATCACCAACGAGGACGTTA
CATTCAAGATCAACGAAGAGTATGCGCGCCGCTTCGAATACAACAAGAAG
AGAGAAGAAAAGCAGCAATGTAAGTTCCTATGCATCTACAATCTGCATGC
GAGGAGAAACTAATCTCTGTTCTACAATAGTGGAGTCTAAATACGGAAAA
TCTGTGCTTGGCAAACGTCGTGATCGCGATGGTGAAGATGAGTCCGGCGA
CTCGGAGGATGATTCTACCTCTGAAGAAGAGGACGAGGATGGAGAATTAG
CCACCGCCGCCCTGGATGCCGAGATTATGGCCACGCTGAACGCGATCAGA
TCAAAGGACCCTCGGGTGTACGATAGCAATGCCACTTTCTACACCGGGAC
CGACGAGGAGGCGAAACCCGAAAGCTCTGAAAAGAAAGAAAAGCCTATGA
CCCTTCGTGACTACCATCGTGAGAATTTGTTGAGTGGCGCCAATTTGGCA
GATGAGGACGCATCTGAGGCGCCGAAGACCTACGCTCAAGAGCAGGAGGA
ATTGAAGGATGCGGTTGTCCGTGAAATGCACGCCGCTGCCGGTAAAGGTG
ATGATGGTGAGGACGACGAAGATGACTTCCTTGTTGCCAAATCGGCGCCT
GAACCTCTTCCGGCGGCCAAGAAGGATGTCAATCTGGATGTTGAGAATGC
GGACAAGGACCCGGAAACCTTCCTTTCAAACTTCATGTCGGCAAGAGCGT
GGATACCTGCTGGTAGATCGGAACTTCAACCGTTCGAGTCTGATGACGAA
GAGGAAGATCAACGGGCAGAGGCATTCGAAGAGGCATACAACTTCCGCTT
CGAAGATCCCAGCAAAATCAACGCTACCTTAATCACTCACTCTCGTGACA
CAACCAACAAGCAGTCGGTTCGCAGAGAAGAAAAGAGCAGCCGAAAGAAA
CGCAGAGATGCGGAGAGGCAGCAGATGGAAGAGGAGAAGAAGCAGCGCGA
GACGGAAAAGAACCGCCTGCGGAAGCTCAAGATGGAAGAACTTCAAGAGA
AGGTCAATCAGATCAAGGAAGTTGCCGGCATTCGTGCAAATGAGCTGACT
GACGAAGATTGGGTCAGCTTCTTGGACGCTGCCTGGGATGACAAGAACTG
GGAGGAGGAGATGCAGAAGCGTTTTGGTGAAGATTACTACGCGGAGGGCG
ATAAGGAAGGAAGCGGTGACGAGTCAGGAAAGAAGAAGCGTCTGAAGAAG
CCTACGTGGGATGATGATATTGATATCAAGGATCTCGTGCCCGACTTCGA
GGAAGAGGAGAAGCCCGCCGTGGATGGTTCTGATGTCGAGATGGAGGATG
ATGAAGAGGGAAGTAACAAGAAGAGCAAGGCGCAGGAGAGACGAGACCAG
AAGCGTGAAGCGCGCAAAGACCGACTTCGTATTCAGGAGGCCGTGGATCG
CAACTTGGATCTTGATATCAGCCTTCTTCCGGGTGCGACCAGGAAGAATG
CTACTGGGTTCCGCTACCGTGAGACCTCGCCTCAGAGTTTTGGATTGACT
GCACGAGATATCCTCATGGCCGACGACACCCATTTGAACCAGTTTGCGGG
CTTGAAAAAGCTTGCTTCGTTCCGTGACCCTGAGAAGAAGAGCCGGGATC
AGAGGAAGCTGGGCAAGAAGGCCCGCCTAAGGCAGTGGCGCAAGGACACC
TTTGGTGACGAAGAAGGCCCCAGGGTTCCCTCGGAGGCGCCACGGGCACC
TACGCCGGACAAGGAGGATGCCGGTAAGGTTGATATTCGTGAAGGTGAAC
CCAAGAAGAAGAGGAGAAAG back to topCoding sequence (CDS) from alignment at ACJE01000020.1:1009961..1011830- >ASPNIDRAFT_139419-T1 ID=ASPNIDRAFT_139419-T1|Name=ASPNIDRAFT_139419-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3610bp|location=Sequence derived from alignment at ACJE01000020.1:1009961..1011830- (Aspergillus niger ATCC 1015)
TGGAGTCTAAATACGGAAAATCTGTGCTTGGCAAACGTCGTGATCGCGAT
GGTGAAGATGAGTCCGGCGACTCGGAGGATGATTCTACCTCTGAAGAAGA
GGACGAGGATGGAGAATTAGCCACCGCCGCCCTGGATGCCGAGATTATGG
CCACGCTGAACGCGATCAGATCAAAGGACCCTCGGGTGTACGATAGCAAT
GCCACTTTCTACACCGGGACCGACGAGGAGGCGAAACCCGAAAGCTCTGA
AAAGAAAGAAAAGCCTATGACCCTTCGTGACTACCATCGTGAGAATTTGT
TGAGTGGCGCCAATTTGGCAGATGAGGACGCATCTGAGGCGCCGAAGACC
TACGCTCAAGAGCAGGAGGAATTGAAGGATGCGGTTGTCCGTGAAATGCA
CGCCGCTGCCGGTAAAGGTGATGATGGTGAGGACGACGAAGATGACTTCC
TTGTTGCCAAATCGGCGCCTGAACCTCTTCCGGCGGCCAAGAAGGATGTC
AATCTGGATGTTGAGAATGCGGACAAGGACCCGGAAACCTTCCTTTCAAA
CTTCATGTCGGCAAGAGCGTGGATACCTGCTGGTAGATCGGAACTTCAAC
CGTTCGAGTCTGATGACGAAGAGGAAGATCAACGGGCAGAGGCATTCGAA
GAGGCATACAACTTCCGCTTCGAAGATCCCAGCAAAATCAACGCTACCTT
AATCACTCACTCTCGTGACACAACCAACAAGCAGTCGGTTCGCAGAGAAG
AAAAGAGCAGCCGAAAGAAACGCAGAGATGCGGAGAGGCAGCAGATGGAA
GAGGAGAAGAAGCAGCGCGAGACGGAAAAGAACCGCCTGCGGAAGCTCAA
GATGGAAGAACTTCAAGAGAAGGTCAATCAGATCAAGGAAGTTGCCGGCA
TTCGTGCAAATGAGCTGACTGACGAAGATTGGGTCAGCTTCTTGGACGCT
GCCTGGGATGACAAGAACTGGGAGGAGGAGATGCAGAAGCGTTTTGGTGA
AGATTACTACGCGGAGGGCGATAAGGAAGGAAGCGGTGACGAGTCAGGAA
AGAAGAAGCGTCTGAAGAAGCCTACGTGGGATGATGATATTGATATCAAG
GATCTCGTGCCCGACTTCGAGGAAGAGGAGAAGCCCGCCGTGGATGGTTC
TGATGTCGAGATGGAGGATGATGAAGAGGGAAGTAACAAGAAGAGCAAGG
CGCAGGAGAGACGAGACCAGAAGCGTGAAGCGCGCAAAGACCGACTTCGT
ATTCAGGAGGCCGTGGATCGCAACTTGGATCTTGATATCAGCCTTCTTCC
GGGTGCGACCAGGAAGAATGCTACTGGGTTCCGCTACCGTGAGACCTCGC
CTCAGAGTTTTGGATTGACTGCACGAGATATCCTCATGGCCGACGACACC
CATTTGAACCAGTTTGCGGGCTTGAAAAAGCTTGCTTCGTTCCGTGACCC
TGAGAAGAAGAGCCGGGATCAGAGGAAGCTGGGCAAGAAGGCCCGCCTAA
GGCAGTGGCGCAAGGACACCTTTGGTGACGAAGAAGGCCCCAGGGTTCCC
TCGGAGGCGCCACGGGCACCTACGCCGGACAAGGAGGATGCCGGTAAGGT
TGATATTCGTGAAGGTGAACCCAAGAAGAAGAGGAGGAGCCCCCAGCCAA
GAGGTCGCGCAAGCTGCTCGATGACGACAGCTCCAGCGACTCAGGAGACG
AGTCCGGCGGAGTTCCCATCACCAACGAGGACGTTACATTCAAGATCAAC
GAAGAGTATGCGCGCCGCTTCGAATACAACAAGAAGAGAGAAGAAAAGCA
GCAATTGGAGTCTAAATACGGAAAATCTGTGCTTGGCAAACGTCGTGATC
GCGATGGTGAAGATGAGTCCGGCGACTCGGAGGATGATTCTACCTCTGAA
GAAGAGGACGAGGATGGAGAATTAGCCACCGCCGCCCTGGATGCCGAGAT
TATGGCCACGCTGAACGCGATCAGATCAAAGGACCCTCGGGTGTACGATA
GCAATGCCACTTTCTACACCGGGACCGACGAGGAGGCGAAACCCGAAAGC
TCTGAAAAGAAAGAAAAGCCTATGACCCTTCGTGACTACCATCGTGAGAA
TTTGTTGAGTGGCGCCAATTTGGCAGATGAGGACGCATCTGAGGCGCCGA
AGACCTACGCTCAAGAGCAGGAGGAATTGAAGGATGCGGTTGTCCGTGAA
ATGCACGCCGCTGCCGGTAAAGGTGATGATGGTGAGGACGACGAAGATGA
CTTCCTTGTTGCCAAATCGGCGCCTGAACCTCTTCCGGCGGCCAAGAAGG
ATGTCAATCTGGATGTTGAGAATGCGGACAAGGACCCGGAAACCTTCCTT
TCAAACTTCATGTCGGCAAGAGCGTGGATACCTGCTGGTAGATCGGAACT
TCAACCGTTCGAGTCTGATGACGAAGAGGAAGATCAACGGGCAGAGGCAT
TCGAAGAGGCATACAACTTCCGCTTCGAAGATCCCAGCAAAATCAACGCT
ACCTTAATCACTCACTCTCGTGACACAACCAACAAGCAGTCGGTTCGCAG
AGAAGAAAAGAGCAGCCGAAAGAAACGCAGAGATGCGGAGAGGCAGCAGA
TGGAAGAGGAGAAGAAGCAGCGCGAGACGGAAAAGAACCGCCTGCGGAAG
CTCAAGATGGAAGAACTTCAAGAGAAGGTCAATCAGATCAAGGAAGTTGC
CGGCATTCGTGCAAATGAGCTGACTGACGAAGATTGGGTCAGCTTCTTGG
ACGCTGCCTGGGATGACAAGAACTGGGAGGAGGAGATGCAGAAGCGTTTT
GGTGAAGATTACTACGCGGAGGGCGATAAGGAAGGAAGCGGTGACGAGTC
AGGAAAGAAGAAGCGTCTGAAGAAGCCTACGTGGGATGATGATATTGATA
TCAAGGATCTCGTGCCCGACTTCGAGGAAGAGGAGAAGCCCGCCGTGGAT
GGTTCTGATGTCGAGATGGAGGATGATGAAGAGGGAAGTAACAAGAAGAG
CAAGGCGCAGGAGAGACGAGACCAGAAGCGTGAAGCGCGCAAAGACCGAC
TTCGTATTCAGGAGGCCGTGGATCGCAACTTGGATCTTGATATCAGCCTT
CTTCCGGGTGCGACCAGGAAGAATGCTACTGGGTTCCGCTACCGTGAGAC
CTCGCCTCAGAGTTTTGGATTGACTGCACGAGATATCCTCATGGCCGACG
ACACCCATTTGAACCAGTTTGCGGGCTTGAAAAAGCTTGCTTCGTTCCGT
GACCCTGAGAAGAAGAGCCGGGATCAGAGGAAGCTGGGCAAGAAGGCCCG
CCTAAGGCAGTGGCGCAAGGACACCTTTGGTGACGAAGAAGGCCCCAGGG
TTCCCTCGGAGGCGCCACGGGCACCTACGCCGGACAAGGAGGATGCCGGT
AAGGTTGATATTCGTGAAGGTGAACCCAAGAAGAAGAGGAGGAGCCCCCA
GCCAAGAGGTCGCGCAAGCTGCTCGATGACGACAGCTCCAGCGACTCAGG
AGACGAGTCCGGCGGAGTTCCCATCACCAACGAGGACGTTACATTCAAGA
TCAACGAAGAGTATGCGCGCCGCTTCGAATACAACAAGAAGAGAGAAGAA
AAGCAGCAAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262POL |
| DBxref | InterPro:IPR018034 |
| DBxref | InterPro:IPR024626 |
| DBxref | PFAM:PF12936 |
| DBxref | PFAM:PF05178 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000020.1 | supercontig | ACJE01000020.1:1009961..1011830 - |
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