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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000004.1:1826103..1827982- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_140888-T1 ID=ASPNIDRAFT_140888-T1|Name=ASPNIDRAFT_140888-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1880bp|location=Sequence derived from alignment at ACJE01000004.1:1826103..1827982- (Aspergillus niger ATCC 1015)
GTAAAAAGACCTGACCAGCATGTCGACATCCGCACGATTCTCGATCCGCC
GGATCTCGACGCATGGCGAGAACGGCTTTTCAATGTCGACGAGATGATAG
TCCTAAGTGAGGAGCAGTGCGTATTTTTTACTTTACTGCAGATGAAATGC
CCTTGTTGACATACTCCAGATTCCTAACATATTTCCCACACATTGACAAC
GTCTACTCCCACCGCTCAACTCAACACTACAAACGCAAACCACTAATTTC
CCATTACTGGGACTGTCGCCTGAAAGGTCGACCTCCCGGAACACCGAAAT
CCAACGATCCCAACAAAAAGAAACGTAAACGAACTGCCCGTCAGCGGGAT
CTCTGTGATGTGAAGATCAAGATCACAGAATACTTCCCGGGCCACGATGT
TATGGGATCAGATCTTGGAGTCCTTGATGGGCTTGGGGTTCCTAGCCCAG
TACTCCAGGAGTCTGCTGTCAGGGAGCAACAACAAGCTCAAAACCAGCAG
TTTGGTCTACTAACGCCAAGCTTGAATCCACCTCTACCAGAGGGTCATCC
AGGGGTCAACGGGCAGCGGTTCTTTACTATCCAGCGAGTAAATGGGAATG
GGGCGAACGGGAAGAACGATGGTGTGAGTGGGGGCCATCGTCATACGCTG
GAGGACAGTGATCGCGTGAAGAAGAATAGCGTGCAGCGGTTCTTATTGCA
GGAGTTGAAAGAGAAGAAGAGGTCGCTGAATGTAAGTTTGTTTCTTTATG
CTTGTTGATTGATCCTGGCACAAGCGTGTTACGTCATTCGGCGGAGAAGT
GCCTATCGCCGACTATCTTCCCCGCTCGTCAACTGCACCTTCACTTCCCG
TCCACCATGCTCCGAAGATCCATTCTGTTGTTGAAACCATTGCCATTTGG
CAATTTATCCAGGCGTGTGTCCTCTGCTGTTAGGACACGATTGATTGCTC
TTCCTTTTAATCACCACCGCACACAGACCAGAGTAATGGCTACTCAGAAC
CAAATTCAAAAACAATACCATACCAAAGCCACCGGCCTGGCTGCCCAGAC
AGTCGCGCACCGCTCACAAGACAATGAACTGAAATTGTATGGAAGTTGCT
TTTGGTACGTTCACTCTAGTTTATATGCATATATACATCGTCGTTAGTGC
TGACCACTGCTAGCCCTTTTGTACAGCGCGTCTGGGTTGCCCTGGAGATC
AAGGGCATCCCCTATCAATATATTGAGGTTGACCCTCATAAGAAGCCCCA
GTCATTGCTGGACGTGAACCCCAGGGGTCTTGTCCCAGCCTTGCGGCACG
GGGATTGGGGCTCATATGAGAGTTCCGTATTGCTGGAATACGTAAGAGTC
TACCCTTGCCCCACTGAACCAACTTGATCCAATCCTAACATGGCCCTAGT
TGGAGGATCTGAATGTCGGCACACCGTTGCTTCCGCCCGGAGACGCCAAG
CTGAGGGCGCATTGCCGACTGTGGACGGATTTTGTATGCACCCCATGATT
ATCGTCCCCTTCACCTCTGACATTCGCAGATCAACCGCCACATCGTCCCA
AATTTCTACCGTGTCCTTCAAGAGCAAGACACACATAAGCAAATAACCAA
CGCGCAGGAGCTCCGAGATGCATTCAACACATTGGTCGGCGCCGCAGATG
CGCAGGGCCCGTTCTTTCTGGGCGCTCAAATCTCGTTCGTTGATGTCCAG
GTCGCCCCTTGGATCATCCGCTTGCGCCGTGCCTTGAAGCCTTATCGCGG
GTGGCCAGACCCGGAGCCTGGCAGTCGCTGGGGAGCCTGGGTCGACGCTA
TTGAGAACAATGAGCACATCCAGGCAACCACGAGCACCGATGAGCTCTAT
CTGGATAGTTATGAGCGATACGCTCGTAAG back to topCoding sequence (CDS) from alignment at ACJE01000004.1:1826103..1827982- >ASPNIDRAFT_140888-T1 ID=ASPNIDRAFT_140888-T1|Name=ASPNIDRAFT_140888-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=8022bp|location=Sequence derived from alignment at ACJE01000004.1:1826103..1827982- (Aspergillus niger ATCC 1015)
GGCCCGTTCTTTCTGGGCGCTCAAATCTCGTTCGTTGATGTCCAGGTCGC
CCCTTGGATCATCCGCTTGCGCCGTGCCTTGAAGCCTTATCGCGGGTGGC
CAGACCCGGAGCCTGGCAGTCGCTGGGGAGCCTGGGTCGACGCTATTGAG
AACAATGAGCACATCCAGGCAACCACGAGCACCGATGAGCTCTATCTGGA
TAGTTATGAGCGATACGCTCGTTTGGAGGATCTGAATGTCGGCACACCGT
TGCTTCCGCCCGGAGACGCCAAGCTGAGGGCGCATTGCCGACTGTGGACG
GATTTTCCCTTTTGTACAGCGCGTCTGGGTTGCCCTGGAGATCAAGGGCA
TCCCCTATCAATATATTGAGGTTGACCCTCATAAGAAGCCCCAGTCATTG
CTGGACGTGAACCCCAGGGGTCTTGTCCCAGCCTTGCGGCACGGGGATTG
GGGCTCATATGAGAGTTCCGTATTGCTGGAATACAACCAAATTCAAAAAC
AATACCATACCAAAGCCACCGGCCTGGCTGCCCAGACAGTCGCGCACCGC
TCACAAGACAATGAACTGAAATTGTATGGAAGTTGCTTTTGGGTCATCCA
GGGGTCAACGGGCAGCGGTTCTTTACTATCCAGCGAGTAAATGGGAATGG
GGCGAACGGGAAGAACGATGGTGTGAGTGGGGGCCATCGTCATACGCTGG
AGGACAGTGATCGCGTGAAGAAGAATAGCGTGCAGCGGTTCTTATTGCAG
GAGTTGAAAGAGAAGAAGAGGTCGCTGAATATTCCTAACATATTTCCCAC
ACATTGACAACGTCTACTCCCACCGCTCAACTCAACACTACAAACGCAAA
CCACTAATTTCCCATTACTGGGACTGTCGCCTGAAAGGTCGACCTCCCGG
AACACCGAAATCCAACGATCCCAACAAAAAGAAACGTAAACGAACTGCCC
GTCAGCGGGATCTCTGTGATGTGAAGATCAAGATCACAGAATACTTCCCG
GGCCACGATGTTATGGGATCAGATCTTGGAGTAAAAAGACCTGACCAGCA
TGTCGACATCCGCACGATTCTCGATCCGCCGGATCTCGACGCATGGCGAG
AACGGCTTTTCAATGTCGACGAGATGATAGTCCTAAGTGAGGAGCAGGCC
CGTTCTTTCTGGGCGCTCAAATCTCGTTCGTTGATGTCCAGGTCGCCCCT
TGGATCATCCGCTTGCGCCGTGCCTTGAAGCCTTATCGCGGGTGGCCAGA
CCCGGAGCCTGGCAGTCGCTGGGGAGCCTGGGTCGACGCTATTGAGAACA
ATGAGCACATCCAGGCAACCACGAGCACCGATGAGCTCTATCTGGATAGT
TATGAGCGATACGCTCGTTTGGAGGATCTGAATGTCGGCACACCGTTGCT
TCCGCCCGGAGACGCCAAGCTGAGGGCGCATTGCCGACTGTGGACGGATT
TTCCCTTTTGTACAGCGCGTCTGGGTTGCCCTGGAGATCAAGGGCATCCC
CTATCAATATATTGAGGTTGACCCTCATAAGAAGCCCCAGTCATTGCTGG
ACGTGAACCCCAGGGGTCTTGTCCCAGCCTTGCGGCACGGGGATTGGGGC
TCATATGAGAGTTCCGTATTGCTGGAATACAACCAAATTCAAAAACAATA
CCATACCAAAGCCACCGGCCTGGCTGCCCAGACAGTCGCGCACCGCTCAC
AAGACAATGAACTGAAATTGTATGGAAGTTGCTTTTGGGTCATCCAGGGG
TCAACGGGCAGCGGTTCTTTACTATCCAGCGAGTAAATGGGAATGGGGCG
AACGGGAAGAACGATGGTGTGAGTGGGGGCCATCGTCATACGCTGGAGGA
CAGTGATCGCGTGAAGAAGAATAGCGTGCAGCGGTTCTTATTGCAGGAGT
TGAAAGAGAAGAAGAGGTCGCTGAATATTCCTAACATATTTCCCACACAT
TGACAACGTCTACTCCCACCGCTCAACTCAACACTACAAACGCAAACCAC
TAATTTCCCATTACTGGGACTGTCGCCTGAAAGGTCGACCTCCCGGAACA
CCGAAATCCAACGATCCCAACAAAAAGAAACGTAAACGAACTGCCCGTCA
GCGGGATCTCTGTGATGTGAAGATCAAGATCACAGAATACTTCCCGGGCC
ACGATGTTATGGGATCAGATCTTGGAGTAAAAAGACCTGACCAGCATGTC
GACATCCGCACGATTCTCGATCCGCCGGATCTCGACGCATGGCGAGAACG
GCTTTTCAATGTCGACGAGATGATAGTCCTAAGTGAGGAGCAGGCCCGTT
CTTTCTGGGCGCTCAAATCTCGTTCGTTGATGTCCAGGTCGCCCCTTGGA
TCATCCGCTTGCGCCGTGCCTTGAAGCCTTATCGCGGGTGGCCAGACCCG
GAGCCTGGCAGTCGCTGGGGAGCCTGGGTCGACGCTATTGAGAACAATGA
GCACATCCAGGCAACCACGAGCACCGATGAGCTCTATCTGGATAGTTATG
AGCGATACGCTCGTTTGGAGGATCTGAATGTCGGCACACCGTTGCTTCCG
CCCGGAGACGCCAAGCTGAGGGCGCATTGCCGACTGTGGACGGATTTTCC
CTTTTGTACAGCGCGTCTGGGTTGCCCTGGAGATCAAGGGCATCCCCTAT
CAATATATTGAGGTTGACCCTCATAAGAAGCCCCAGTCATTGCTGGACGT
GAACCCCAGGGGTCTTGTCCCAGCCTTGCGGCACGGGGATTGGGGCTCAT
ATGAGAGTTCCGTATTGCTGGAATACAACCAAATTCAAAAACAATACCAT
ACCAAAGCCACCGGCCTGGCTGCCCAGACAGTCGCGCACCGCTCACAAGA
CAATGAACTGAAATTGTATGGAAGTTGCTTTTGGGTCATCCAGGGGTCAA
CGGGCAGCGGTTCTTTACTATCCAGCGAGTAAATGGGAATGGGGCGAACG
GGAAGAACGATGGTGTGAGTGGGGGCCATCGTCATACGCTGGAGGACAGT
GATCGCGTGAAGAAGAATAGCGTGCAGCGGTTCTTATTGCAGGAGTTGAA
AGAGAAGAAGAGGTCGCTGAATATTCCTAACATATTTCCCACACATTGAC
AACGTCTACTCCCACCGCTCAACTCAACACTACAAACGCAAACCACTAAT
TTCCCATTACTGGGACTGTCGCCTGAAAGGTCGACCTCCCGGAACACCGA
AATCCAACGATCCCAACAAAAAGAAACGTAAACGAACTGCCCGTCAGCGG
GATCTCTGTGATGTGAAGATCAAGATCACAGAATACTTCCCGGGCCACGA
TGTTATGGGATCAGATCTTGGAGTAAAAAGACCTGACCAGCATGTCGACA
TCCGCACGATTCTCGATCCGCCGGATCTCGACGCATGGCGAGAACGGCTT
TTCAATGTCGACGAGATGATAGTCCTAAGTGAGGAGCAGGCCCGTTCTTT
CTGGGCGCTCAAATCTCGTTCGTTGATGTCCAGGTCGCCCCTTGGATCAT
CCGCTTGCGCCGTGCCTTGAAGCCTTATCGCGGGTGGCCAGACCCGGAGC
CTGGCAGTCGCTGGGGAGCCTGGGTCGACGCTATTGAGAACAATGAGCAC
ATCCAGGCAACCACGAGCACCGATGAGCTCTATCTGGATAGTTATGAGCG
ATACGCTCGTTTGGAGGATCTGAATGTCGGCACACCGTTGCTTCCGCCCG
GAGACGCCAAGCTGAGGGCGCATTGCCGACTGTGGACGGATTTTCCCTTT
TGTACAGCGCGTCTGGGTTGCCCTGGAGATCAAGGGCATCCCCTATCAAT
ATATTGAGGTTGACCCTCATAAGAAGCCCCAGTCATTGCTGGACGTGAAC
CCCAGGGGTCTTGTCCCAGCCTTGCGGCACGGGGATTGGGGCTCATATGA
GAGTTCCGTATTGCTGGAATACAACCAAATTCAAAAACAATACCATACCA
AAGCCACCGGCCTGGCTGCCCAGACAGTCGCGCACCGCTCACAAGACAAT
GAACTGAAATTGTATGGAAGTTGCTTTTGGGTCATCCAGGGGTCAACGGG
CAGCGGTTCTTTACTATCCAGCGAGTAAATGGGAATGGGGCGAACGGGAA
GAACGATGGTGTGAGTGGGGGCCATCGTCATACGCTGGAGGACAGTGATC
GCGTGAAGAAGAATAGCGTGCAGCGGTTCTTATTGCAGGAGTTGAAAGAG
AAGAAGAGGTCGCTGAATATTCCTAACATATTTCCCACACATTGACAACG
TCTACTCCCACCGCTCAACTCAACACTACAAACGCAAACCACTAATTTCC
CATTACTGGGACTGTCGCCTGAAAGGTCGACCTCCCGGAACACCGAAATC
CAACGATCCCAACAAAAAGAAACGTAAACGAACTGCCCGTCAGCGGGATC
TCTGTGATGTGAAGATCAAGATCACAGAATACTTCCCGGGCCACGATGTT
ATGGGATCAGATCTTGGAGTAAAAAGACCTGACCAGCATGTCGACATCCG
CACGATTCTCGATCCGCCGGATCTCGACGCATGGCGAGAACGGCTTTTCA
ATGTCGACGAGATGATAGTCCTAAGTGAGGAGCAGGCCCGTTCTTTCTGG
GCGCTCAAATCTCGTTCGTTGATGTCCAGGTCGCCCCTTGGATCATCCGC
TTGCGCCGTGCCTTGAAGCCTTATCGCGGGTGGCCAGACCCGGAGCCTGG
CAGTCGCTGGGGAGCCTGGGTCGACGCTATTGAGAACAATGAGCACATCC
AGGCAACCACGAGCACCGATGAGCTCTATCTGGATAGTTATGAGCGATAC
GCTCGTTTGGAGGATCTGAATGTCGGCACACCGTTGCTTCCGCCCGGAGA
CGCCAAGCTGAGGGCGCATTGCCGACTGTGGACGGATTTTCCCTTTTGTA
CAGCGCGTCTGGGTTGCCCTGGAGATCAAGGGCATCCCCTATCAATATAT
TGAGGTTGACCCTCATAAGAAGCCCCAGTCATTGCTGGACGTGAACCCCA
GGGGTCTTGTCCCAGCCTTGCGGCACGGGGATTGGGGCTCATATGAGAGT
TCCGTATTGCTGGAATACAACCAAATTCAAAAACAATACCATACCAAAGC
CACCGGCCTGGCTGCCCAGACAGTCGCGCACCGCTCACAAGACAATGAAC
TGAAATTGTATGGAAGTTGCTTTTGGGTCATCCAGGGGTCAACGGGCAGC
GGTTCTTTACTATCCAGCGAGTAAATGGGAATGGGGCGAACGGGAAGAAC
GATGGTGTGAGTGGGGGCCATCGTCATACGCTGGAGGACAGTGATCGCGT
GAAGAAGAATAGCGTGCAGCGGTTCTTATTGCAGGAGTTGAAAGAGAAGA
AGAGGTCGCTGAATATTCCTAACATATTTCCCACACATTGACAACGTCTA
CTCCCACCGCTCAACTCAACACTACAAACGCAAACCACTAATTTCCCATT
ACTGGGACTGTCGCCTGAAAGGTCGACCTCCCGGAACACCGAAATCCAAC
GATCCCAACAAAAAGAAACGTAAACGAACTGCCCGTCAGCGGGATCTCTG
TGATGTGAAGATCAAGATCACAGAATACTTCCCGGGCCACGATGTTATGG
GATCAGATCTTGGAGTAAAAAGACCTGACCAGCATGTCGACATCCGCACG
ATTCTCGATCCGCCGGATCTCGACGCATGGCGAGAACGGCTTTTCAATGT
CGACGAGATGATAGTCCTAAGTGAGGAGCAGGCCCGTTCTTTCTGGGCGC
TCAAATCTCGTTCGTTGATGTCCAGGTCGCCCCTTGGATCATCCGCTTGC
GCCGTGCCTTGAAGCCTTATCGCGGGTGGCCAGACCCGGAGCCTGGCAGT
CGCTGGGGAGCCTGGGTCGACGCTATTGAGAACAATGAGCACATCCAGGC
AACCACGAGCACCGATGAGCTCTATCTGGATAGTTATGAGCGATACGCTC
GTTTGGAGGATCTGAATGTCGGCACACCGTTGCTTCCGCCCGGAGACGCC
AAGCTGAGGGCGCATTGCCGACTGTGGACGGATTTTCCCTTTTGTACAGC
GCGTCTGGGTTGCCCTGGAGATCAAGGGCATCCCCTATCAATATATTGAG
GTTGACCCTCATAAGAAGCCCCAGTCATTGCTGGACGTGAACCCCAGGGG
TCTTGTCCCAGCCTTGCGGCACGGGGATTGGGGCTCATATGAGAGTTCCG
TATTGCTGGAATACAACCAAATTCAAAAACAATACCATACCAAAGCCACC
GGCCTGGCTGCCCAGACAGTCGCGCACCGCTCACAAGACAATGAACTGAA
ATTGTATGGAAGTTGCTTTTGGGTCATCCAGGGGTCAACGGGCAGCGGTT
CTTTACTATCCAGCGAGTAAATGGGAATGGGGCGAACGGGAAGAACGATG
GTGTGAGTGGGGGCCATCGTCATACGCTGGAGGACAGTGATCGCGTGAAG
AAGAATAGCGTGCAGCGGTTCTTATTGCAGGAGTTGAAAGAGAAGAAGAG
GTCGCTGAATATTCCTAACATATTTCCCACACATTGACAACGTCTACTCC
CACCGCTCAACTCAACACTACAAACGCAAACCACTAATTTCCCATTACTG
GGACTGTCGCCTGAAAGGTCGACCTCCCGGAACACCGAAATCCAACGATC
CCAACAAAAAGAAACGTAAACGAACTGCCCGTCAGCGGGATCTCTGTGAT
GTGAAGATCAAGATCACAGAATACTTCCCGGGCCACGATGTTATGGGATC
AGATCTTGGAGTAAAAAGACCTGACCAGCATGTCGACATCCGCACGATTC
TCGATCCGCCGGATCTCGACGCATGGCGAGAACGGCTTTTCAATGTCGAC
GAGATGATAGTCCTAAGTGAGGAGCAGGCCCGTTCTTTCTGGGCGCTCAA
ATCTCGTTCGTTGATGTCCAGGTCGCCCCTTGGATCATCCGCTTGCGCCG
TGCCTTGAAGCCTTATCGCGGGTGGCCAGACCCGGAGCCTGGCAGTCGCT
GGGGAGCCTGGGTCGACGCTATTGAGAACAATGAGCACATCCAGGCAACC
ACGAGCACCGATGAGCTCTATCTGGATAGTTATGAGCGATACGCTCGTTT
GGAGGATCTGAATGTCGGCACACCGTTGCTTCCGCCCGGAGACGCCAAGC
TGAGGGCGCATTGCCGACTGTGGACGGATTTTCCCTTTTGTACAGCGCGT
CTGGGTTGCCCTGGAGATCAAGGGCATCCCCTATCAATATATTGAGGTTG
ACCCTCATAAGAAGCCCCAGTCATTGCTGGACGTGAACCCCAGGGGTCTT
GTCCCAGCCTTGCGGCACGGGGATTGGGGCTCATATGAGAGTTCCGTATT
GCTGGAATACAACCAAATTCAAAAACAATACCATACCAAAGCCACCGGCC
TGGCTGCCCAGACAGTCGCGCACCGCTCACAAGACAATGAACTGAAATTG
TATGGAAGTTGCTTTTGGGTCATCCAGGGGTCAACGGGCAGCGGTTCTTT
ACTATCCAGCGAGTAAATGGGAATGGGGCGAACGGGAAGAACGATGGTGT
GAGTGGGGGCCATCGTCATACGCTGGAGGACAGTGATCGCGTGAAGAAGA
ATAGCGTGCAGCGGTTCTTATTGCAGGAGTTGAAAGAGAAGAAGAGGTCG
CTGAATATTCCTAACATATTTCCCACACATTGACAACGTCTACTCCCACC
GCTCAACTCAACACTACAAACGCAAACCACTAATTTCCCATTACTGGGAC
TGTCGCCTGAAAGGTCGACCTCCCGGAACACCGAAATCCAACGATCCCAA
CAAAAAGAAACGTAAACGAACTGCCCGTCAGCGGGATCTCTGTGATGTGA
AGATCAAGATCACAGAATACTTCCCGGGCCACGATGTTATGGGATCAGAT
CTTGGAGTAAAAAGACCTGACCAGCATGTCGACATCCGCACGATTCTCGA
TCCGCCGGATCTCGACGCATGGCGAGAACGGCTTTTCAATGTCGACGAGA
TGATAGTCCTAAGTGAGGAGCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036249 |
| DBxref | InterPro:IPR036282 |
| DBxref | InterPro:IPR040079 |
| DBxref | InterPro:IPR004045 |
| DBxref | PFAM:PF13417 |
| DBxref | PFAM:PF13409 |
| DBxref | PFAM:PF02798 |
| DBxref | PFAM:PF13410 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000004.1 | supercontig | ACJE01000004.1:1826103..1827982 - |
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