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ASPNIDRAFT_141677-T1, ASPNIDRAFT_141677-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_141677-T1
Unique NameASPNIDRAFT_141677-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:2848300..2849520+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_141677-T1 ID=ASPNIDRAFT_141677-T1|Name=ASPNIDRAFT_141677-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1221bp|location=Sequence derived from alignment at ACJE01000004.1:2848300..2849520+ (Aspergillus niger ATCC 1015)
ATGCACTCTTACCAGCTTCTTGGCCTGGCCGCTGTCGGCTCCCTCGTCTC
TGCCGCCCCCGCTCCTTCTCGCGTCTCCGAGTTCGCTAAGAAGGCCTCTA
CCTGCACCTTCACCTCTGCCTCTGAGGCCAGCGAGAGCATCTCCAGCTGC
TCCGATGTTGTCCTGAGCAGCATCGAGGTCCCCGCTGGCGAGACCCTCGA
CCTGTCCGATGCTGCTGATGGCTCCACCGTATGTGCTCTCAGCCGTCTTC
CATCCTGGCTATCACGCTAACACCATCTAGATCACCTTCGAGGGCACCAC
TTCCTTCGGATACAAGGAATGGAAGGGCCCCCTGATCCGCTTCGGTGGTA
AGGATCTGACTGTCACCATGGCCGACGGCGCTGTCATCGACGGTGACGGT
TCCCGCTGGTGGGACAGCAAGGGTACCAACGGTGGCAAGACCAAGCCCAA
GTTCATGTACATCCACGATGTTGAGGACTCGACCTTCAAGGGCATCAACA
TCAAGAACACTCCCGTCCAGGCCATCAGTGTCCAGGCTACCAACGTCCAC
CTGAACGACTTCACCATCGACAACTCCGACGGTGATGACAACGGTGGCCA
CAACACCGACGGTTTCGACATCAGCGAGTCTACCGGTGTCTACATCAGCG
GTGCTACCGTCAAGAACCAGGACGACTGCATTGCCATCAACTCTGGCGAG
GCACGATATCCCTATTCCACTATCATTCCTTCCATTCATATCGCTAACAA
TCAAACCCACAGAGCATCTCTTTCACCGGCGGTACCTGCTCCGGTGGCCA
CGGTCTCTCCATCGGCTCTGTCGGTGGCCGTGATGACAACACCGTCAAGA
ACGTGACCATCTCCGACTCCACTGTCAGCAACTCCGCCAACGGTGTCCGC
ATCAAGACCATCTACAAGGAGACCGGTGATGTCAGCGAGATCACCTACTC
TAACATCCAGCTCTCCGGAATCACCGACTACGGTATCGTCATCGAGCAGG
ACTACGAGAACGGCTCTCCCACCGGCACCCCCTCCACCGGTATCCCCATC
ACTGATGTCACCGTTGACGGTGTCACCGGTACTCTCGAGGATGACGCCAC
CCAGGTCTACATTCTCTGCGGTGACGGCTCTTGCTCTGACTGGACCTGGT
CCGGTGTTGACCTCTCTGGTGGCAAGACCAGCGATAAATGCGAGAACGTT
CCTTCCGGTGCTTCTTGCTAA
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Coding sequence (CDS) from alignment at ACJE01000004.1:2848300..2849520+

>ASPNIDRAFT_141677-T1 ID=ASPNIDRAFT_141677-T1|Name=ASPNIDRAFT_141677-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3195bp|location=Sequence derived from alignment at ACJE01000004.1:2848300..2849520+ (Aspergillus niger ATCC 1015)
ATGCACTCTTACCAGCTTCTTGGCCTGGCCGCTGTCGGCTCCCTCGTCTC
TGCCGCCCCCGCTCCTTCTCGCGTCTCCGAGTTCGCTAAGAAGGCCTCTA
CCTGCACCTTCACCTCTGCCTCTGAGGCCAGCGAGAGCATCTCCAGCTGC
TCCGATGTTGTCCTGAGCAGCATCGAGGTCCCCGCTGGCGAGACCCTCGA
CCTGTCCGATGCTGCTGATGGCTCCACCATCACCTTCGAGGGCACCACTT
CCTTCGGATACAAGGAATGGAAGGGCCCCCTGATCCGCTTCGGTGGTAAG
GATCTGACTGTCACCATGGCCGACGGCGCTGTCATCGACGGTGACGGTTC
CCGCTGGTGGGACAGCAAGGGTACCAACGGTGGCAAGACCAAGCCCAAGT
TCATGTACATCCACGATGTTGAGGACTCGACCTTCAAGGGCATCAACATC
AAGAACACTCCCGTCCAGGCCATCAGTGTCCAGGCTACCAACGTCCACCT
GAACGACTTCACCATCGACAACTCCGACGGTGATGACAACGGTGGCCACA
ACACCGACGGTTTCGACATCAGCGAGTCTACCGGTGTCTACATCAGCGGT
GCTACCAGCATCTCTTTCACCGGCGGTACCTGCTCCGGTGGCCACGGTCT
CTCCATCGGCTCTGTCGGTGGCCGTGATGACAACACCGTCAAGAACGTGA
CCATCTCCGACTCCACTGTCAGCAACTCCGCCAACGGTGTCCGCATCAAG
ACCATCTACAAGGAGACCGGTGATGTCAGCGAGATCACCTACTCTAACAT
CCAGCTCTCCGGAATCACCGACTACGGTATCGTCATCGAGCAGGACTACG
AGAACGGCTCTCCCACCGGCACCCCCTCCACCGGTATCCCCATCACTGAT
GTCACCGTTGACGGTGTCACCGGTACTCTCGAGGATGACGCCACCCAGGT
CTACATTCTCTGCGGTGACGGCTCTTGCTCTGACTGGACCTGGTCCGGTG
TTGACCTCTCTGGTGGCAAGACCAGCGATAAATGCGAGAACGTTCCTTCC
GGTGCTTCTTGCTAAATGCACTCTTACCAGCTTCTTGGCCTGGCCGCTGT
CGGCTCCCTCGTCTCTGCCGCCCCCGCTCCTTCTCGCGTCTCCGAGTTCG
CTAAGAAGGCCTCTACCTGCACCTTCACCTCTGCCTCTGAGGCCAGCGAG
AGCATCTCCAGCTGCTCCGATGTTGTCCTGAGCAGCATCGAGGTCCCCGC
TGGCGAGACCCTCGACCTGTCCGATGCTGCTGATGGCTCCACCATCACCT
TCGAGGGCACCACTTCCTTCGGATACAAGGAATGGAAGGGCCCCCTGATC
CGCTTCGGTGGTAAGGATCTGACTGTCACCATGGCCGACGGCGCTGTCAT
CGACGGTGACGGTTCCCGCTGGTGGGACAGCAAGGGTACCAACGGTGGCA
AGACCAAGCCCAAGTTCATGTACATCCACGATGTTGAGGACTCGACCTTC
AAGGGCATCAACATCAAGAACACTCCCGTCCAGGCCATCAGTGTCCAGGC
TACCAACGTCCACCTGAACGACTTCACCATCGACAACTCCGACGGTGATG
ACAACGGTGGCCACAACACCGACGGTTTCGACATCAGCGAGTCTACCGGT
GTCTACATCAGCGGTGCTACCAGCATCTCTTTCACCGGCGGTACCTGCTC
CGGTGGCCACGGTCTCTCCATCGGCTCTGTCGGTGGCCGTGATGACAACA
CCGTCAAGAACGTGACCATCTCCGACTCCACTGTCAGCAACTCCGCCAAC
GGTGTCCGCATCAAGACCATCTACAAGGAGACCGGTGATGTCAGCGAGAT
CACCTACTCTAACATCCAGCTCTCCGGAATCACCGACTACGGTATCGTCA
TCGAGCAGGACTACGAGAACGGCTCTCCCACCGGCACCCCCTCCACCGGT
ATCCCCATCACTGATGTCACCGTTGACGGTGTCACCGGTACTCTCGAGGA
TGACGCCACCCAGGTCTACATTCTCTGCGGTGACGGCTCTTGCTCTGACT
GGACCTGGTCCGGTGTTGACCTCTCTGGTGGCAAGACCAGCGATAAATGC
GAGAACGTTCCTTCCGGTGCTTCTTGCTAAATGCACTCTTACCAGCTTCT
TGGCCTGGCCGCTGTCGGCTCCCTCGTCTCTGCCGCCCCCGCTCCTTCTC
GCGTCTCCGAGTTCGCTAAGAAGGCCTCTACCTGCACCTTCACCTCTGCC
TCTGAGGCCAGCGAGAGCATCTCCAGCTGCTCCGATGTTGTCCTGAGCAG
CATCGAGGTCCCCGCTGGCGAGACCCTCGACCTGTCCGATGCTGCTGATG
GCTCCACCATCACCTTCGAGGGCACCACTTCCTTCGGATACAAGGAATGG
AAGGGCCCCCTGATCCGCTTCGGTGGTAAGGATCTGACTGTCACCATGGC
CGACGGCGCTGTCATCGACGGTGACGGTTCCCGCTGGTGGGACAGCAAGG
GTACCAACGGTGGCAAGACCAAGCCCAAGTTCATGTACATCCACGATGTT
GAGGACTCGACCTTCAAGGGCATCAACATCAAGAACACTCCCGTCCAGGC
CATCAGTGTCCAGGCTACCAACGTCCACCTGAACGACTTCACCATCGACA
ACTCCGACGGTGATGACAACGGTGGCCACAACACCGACGGTTTCGACATC
AGCGAGTCTACCGGTGTCTACATCAGCGGTGCTACCAGCATCTCTTTCAC
CGGCGGTACCTGCTCCGGTGGCCACGGTCTCTCCATCGGCTCTGTCGGTG
GCCGTGATGACAACACCGTCAAGAACGTGACCATCTCCGACTCCACTGTC
AGCAACTCCGCCAACGGTGTCCGCATCAAGACCATCTACAAGGAGACCGG
TGATGTCAGCGAGATCACCTACTCTAACATCCAGCTCTCCGGAATCACCG
ACTACGGTATCGTCATCGAGCAGGACTACGAGAACGGCTCTCCCACCGGC
ACCCCCTCCACCGGTATCCCCATCACTGATGTCACCGTTGACGGTGTCAC
CGGTACTCTCGAGGATGACGCCACCCAGGTCTACATTCTCTGCGGTGACG
GCTCTTGCTCTGACTGGACCTGGTCCGGTGTTGACCTCTCTGGTGGCAAG
ACCAGCGATAAATGCGAGAACGTTCCTTCCGGTGCTTCTTGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_141677ASPNIDRAFT_141677Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_141677-T1.exon1ASPNIDRAFT_141677-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_141677-T1.exon2ASPNIDRAFT_141677-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_141677-T1.exon3ASPNIDRAFT_141677-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_141677-T1.cdsASPNIDRAFT_141677-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_141677-T1ASPNIDRAFT_141677-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:2848300..2849520 +
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