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ASPNIDRAFT_143049-T1, ASPNIDRAFT_143049-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_143049-T1
Unique NameASPNIDRAFT_143049-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:1585930..1586853+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_143049-T1 ID=ASPNIDRAFT_143049-T1|Name=ASPNIDRAFT_143049-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=924bp|location=Sequence derived from alignment at ACJE01000019.1:1585930..1586853+ (Aspergillus niger ATCC 1015)
CCCCTTTGCATCGAAGAATTCGATCTCTCGGACAAGAACTTCAAGCCTTG
CCCCTGTGGGTATCAGGTACGCATCCTGCTCGCCTTATATTCCCCTCGCG
AACCAGCGGCCCGATCAGGAGATCGCTCGCGTCGTATGCGATCCGGACCG
TCGCTAACAGACCCCTCCAGATCTGTCAATTCTGCTACAACAACATCAAG
ACCCACAGCGAAGAAGGCCGGTGCCCCAACTGCAGACGGGTCTACGATGA
GAGCACCATTCAATACAAGGTTCCCGATGCCGACGAGTATGTGTTCACTC
CTCGCTCTTGTTCCCACTGTCCCTTCCCGCGTCTTGGCGCTAACATCGCA
ACCCGCAATTTTAGATTCAAAGCCGACTTGGCCTTAAAACACCGCAAGGC
TGCCGCCGCGAAAAAGAAGGAGGCCGAGAAACGTGAAATCGAGGCTTCCA
GTCGCAAGAATCTTGCCGGTGTCCGCGTCGTGCAGAAGAACCTGGTCTAC
GTGATCGGTCTCAACCCCACAATACGTGACGAGAATCAACTCCTCTTGAC
TTTGCGCGGTCGAGACTACTTCGGTCAATATGGTGACATCGAGAAGATCG
TCGTGAGCAAGGCAAAGCCTGGTGGCAACCCCAATCAGGGCATTGGCGTC
TACGTCACCTATGCAAGGAAGGCCGACGCAGCCACTTGTATAGCAGCTGT
CGATGGGTCGGCCAACGGTGACCGGGTGCTACGGTAGGTCGAACCCTCCA
CCTTCCTGTGTTCTGTTGGCAATGCAACATACTGACCGCTCTAGTGCCCA
ATACGGTACAACCAAGTATTGTTCTTCCTTCCTGCGTAACGAGCAATGCC
ATAATCGAAACTGCACCTTCCTGCATGAGACTGGTGAGGACAGCGACAGT
TACAGCCGACAGGATCTCTCTTCG
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Coding sequence (CDS) from alignment at ACJE01000019.1:1585930..1586853+

>ASPNIDRAFT_143049-T1 ID=ASPNIDRAFT_143049-T1|Name=ASPNIDRAFT_143049-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2724bp|location=Sequence derived from alignment at ACJE01000019.1:1585930..1586853+ (Aspergillus niger ATCC 1015)
CCCCTTTGCATCGAAGAATTCGATCTCTCGGACAAGAACTTCAAGCCTTG
CCCCTGTGGGTATCAGATCTGTCAATTCTGCTACAACAACATCAAGACCC
ACAGCGAAGAAGGCCGGTGCCCCAACTGCAGACGGGTCTACGATGAGAGC
ACCATTCAATACAAGGTTCCCGATGCCGACGAATTCAAAGCCGACTTGGC
CTTAAAACACCGCAAGGCTGCCGCCGCGAAAAAGAAGGAGGCCGAGAAAC
GTGAAATCGAGGCTTCCAGTCGCAAGAATCTTGCCGGTGTCCGCGTCGTG
CAGAAGAACCTGGTCTACGTGATCGGTCTCAACCCCACAATACGTGACGA
GAATCAACTCCTCTTGACTTTGCGCGGTCGAGACTACTTCGGTCAATATG
GTGACATCGAGAAGATCGTCGTGAGCAAGGCAAAGCCTGGTGGCAACCCC
AATCAGGGCATTGGCGTCTACGTCACCTATGCAAGGAAGGCCGACGCAGC
CACTTGTATAGCAGCTGTCGATGGGTCGGCCAACGGTGACCGGGTGCTAC
GTGCCCAATACGGTACAACCAAGTATTGTTCTTCCTTCCTGCGTAACGAG
CAATGCCATAATCGAAACTGCACCTTCCTGCATGAGACTGGTGAGGACAG
CGACAGTTACAGCCGACAGGATCTCTCTTCGCCCCTTTGCATCGAAGAAT
TCGATCTCTCGGACAAGAACTTCAAGCCTTGCCCCTGTGGGTATCAGATC
TGTCAATTCTGCTACAACAACATCAAGACCCACAGCGAAGAAGGCCGGTG
CCCCAACTGCAGACGGGTCTACGATGAGAGCACCATTCAATACAAGGTTC
CCGATGCCGACGAATTCAAAGCCGACTTGGCCTTAAAACACCGCAAGGCT
GCCGCCGCGAAAAAGAAGGAGGCCGAGAAACGTGAAATCGAGGCTTCCAG
TCGCAAGAATCTTGCCGGTGTCCGCGTCGTGCAGAAGAACCTGGTCTACG
TGATCGGTCTCAACCCCACAATACGTGACGAGAATCAACTCCTCTTGACT
TTGCGCGGTCGAGACTACTTCGGTCAATATGGTGACATCGAGAAGATCGT
CGTGAGCAAGGCAAAGCCTGGTGGCAACCCCAATCAGGGCATTGGCGTCT
ACGTCACCTATGCAAGGAAGGCCGACGCAGCCACTTGTATAGCAGCTGTC
GATGGGTCGGCCAACGGTGACCGGGTGCTACGTGCCCAATACGGTACAAC
CAAGTATTGTTCTTCCTTCCTGCGTAACGAGCAATGCCATAATCGAAACT
GCACCTTCCTGCATGAGACTGGTGAGGACAGCGACAGTTACAGCCGACAG
GATCTCTCTTCGCCCCTTTGCATCGAAGAATTCGATCTCTCGGACAAGAA
CTTCAAGCCTTGCCCCTGTGGGTATCAGATCTGTCAATTCTGCTACAACA
ACATCAAGACCCACAGCGAAGAAGGCCGGTGCCCCAACTGCAGACGGGTC
TACGATGAGAGCACCATTCAATACAAGGTTCCCGATGCCGACGAATTCAA
AGCCGACTTGGCCTTAAAACACCGCAAGGCTGCCGCCGCGAAAAAGAAGG
AGGCCGAGAAACGTGAAATCGAGGCTTCCAGTCGCAAGAATCTTGCCGGT
GTCCGCGTCGTGCAGAAGAACCTGGTCTACGTGATCGGTCTCAACCCCAC
AATACGTGACGAGAATCAACTCCTCTTGACTTTGCGCGGTCGAGACTACT
TCGGTCAATATGGTGACATCGAGAAGATCGTCGTGAGCAAGGCAAAGCCT
GGTGGCAACCCCAATCAGGGCATTGGCGTCTACGTCACCTATGCAAGGAA
GGCCGACGCAGCCACTTGTATAGCAGCTGTCGATGGGTCGGCCAACGGTG
ACCGGGTGCTACGTGCCCAATACGGTACAACCAAGTATTGTTCTTCCTTC
CTGCGTAACGAGCAATGCCATAATCGAAACTGCACCTTCCTGCATGAGAC
TGGTGAGGACAGCGACAGTTACAGCCGACAGGATCTCTCTTCGCCCCTTT
GCATCGAAGAATTCGATCTCTCGGACAAGAACTTCAAGCCTTGCCCCTGT
GGGTATCAGATCTGTCAATTCTGCTACAACAACATCAAGACCCACAGCGA
AGAAGGCCGGTGCCCCAACTGCAGACGGGTCTACGATGAGAGCACCATTC
AATACAAGGTTCCCGATGCCGACGAATTCAAAGCCGACTTGGCCTTAAAA
CACCGCAAGGCTGCCGCCGCGAAAAAGAAGGAGGCCGAGAAACGTGAAAT
CGAGGCTTCCAGTCGCAAGAATCTTGCCGGTGTCCGCGTCGTGCAGAAGA
ACCTGGTCTACGTGATCGGTCTCAACCCCACAATACGTGACGAGAATCAA
CTCCTCTTGACTTTGCGCGGTCGAGACTACTTCGGTCAATATGGTGACAT
CGAGAAGATCGTCGTGAGCAAGGCAAAGCCTGGTGGCAACCCCAATCAGG
GCATTGGCGTCTACGTCACCTATGCAAGGAAGGCCGACGCAGCCACTTGT
ATAGCAGCTGTCGATGGGTCGGCCAACGGTGACCGGGTGCTACGTGCCCA
ATACGGTACAACCAAGTATTGTTCTTCCTTCCTGCGTAACGAGCAATGCC
ATAATCGAAACTGCACCTTCCTGCATGAGACTGGTGAGGACAGCGACAGT
TACAGCCGACAGGATCTCTCTTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143049ASPNIDRAFT_143049Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143049-T1.exon1ASPNIDRAFT_143049-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_143049-T1.exon2ASPNIDRAFT_143049-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_143049-T1.exon3ASPNIDRAFT_143049-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_143049-T1.exon4ASPNIDRAFT_143049-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143049-T1.cdsASPNIDRAFT_143049-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143049-T1ASPNIDRAFT_143049-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09260P5R
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR039515
DBxrefInterPro:IPR034261
DBxrefInterPro:IPR001841
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR000504
DBxrefInterPro:IPR003954
DBxrefPFAM:PF14570
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:1585930..1586853 +
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