You are here

Home

ASPNIDRAFT_143382-T1, ASPNIDRAFT_143382-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_143382-T1
Unique NameASPNIDRAFT_143382-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:1333055..1333377+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_143382-T1 ID=ASPNIDRAFT_143382-T1|Name=ASPNIDRAFT_143382-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=323bp|location=Sequence derived from alignment at ACJE01000009.1:1333055..1333377+ (Aspergillus niger ATCC 1015)
GTGAACCAGACAAACAAAGATGAAAGCTCTGGGCTATACCTGGCAGCTCG
TGGTGGCCACATCATGGTCGTTCAGAAGCTCTTAGACATGGGAGCCAATA
TAGACGCCCCCGGATTTCAGTACGGGGATGCACTTCAAGCGGCGTGTTTT
GGGGGGTGGACAGAGATAGTGCAGCTTCTGATCAATCATGACGCCACCTC
CTCTGTGCCCAGAAGGGGTGAATATTCCAGTCCCCTGCAGGCAGCTTTGG
CAGGTGATAACAATCCAATAGCAGAATACCTGCTTAATGCTGGGGTCAAG
CTTACTACACAGCAGCAATTTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000009.1:1333055..1333377+

>ASPNIDRAFT_143382-T1 ID=ASPNIDRAFT_143382-T1|Name=ASPNIDRAFT_143382-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=322bp|location=Sequence derived from alignment at ACJE01000009.1:1333055..1333377+ (Aspergillus niger ATCC 1015)
GTGAACCAGACAAACAAAGATGAAAGCTCTGGGCTATACCTGGCAGCTCG
TGGTGGCCACATCATGGTCGTTCAGAAGCTCTTAGACATGGGAGCCAATA
TAGACGCCCCCGGATTTCAGTACGGGGATGCACTTCAAGCGGCGTGTTTT
GGGGGGTGGACAGAGATAGTGCAGCTTCTGATCAATCATGACGCCACCTC
CTCTGTGCCCAGAAGGGGTGAATATTCCAGTCCCCTGCAGGCAGCTTTGG
CAGGTGATAACAATCCAATAGCAGAATACCTGCTTAATGCTGGGGTCAAG
CTTACTACACAGCAGCAATTTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143382ASPNIDRAFT_143382Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143382-T1.exon1ASPNIDRAFT_143382-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143382-T1.cdsASPNIDRAFT_143382-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143382-T1ASPNIDRAFT_143382-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR002110
DBxrefPFAM:PF12796
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:1333055..1333377 +
Powered by Drupal