You are here

Home

ASPNIDRAFT_143436-T1, ASPNIDRAFT_143436-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_143436-T1
Unique NameASPNIDRAFT_143436-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000005.1:840853..841287-

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_143436-T1 ID=ASPNIDRAFT_143436-T1|Name=ASPNIDRAFT_143436-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=435bp|location=Sequence derived from alignment at ACJE01000005.1:840853..841287- (Aspergillus niger ATCC 1015)
ATGCCCCTTTGGCTCATCTACCACCCCTCCGGCACCTTCGAGGACACCGC
TTCCAAAAAAGCTCTGACGGAAGATATCACAAAGCTCTACACTCGAATCG
GCCTTCCTGCCTTCTATGTTGTCATCAATTTTATGAAGCTTCCCCCCGGA
GATACCTGGGTCGGCGCCGAAAACAGAACCGAGAAGCCGTTTATTCGAAT
TGTTGCCGACCACATTGCCGTTCGGCTCGAAAATGAGGACCACGTTTACA
AGAATACGTGCGACGCGATTGAAAAAGCCTTGAAGCCTCACATTGCCGAT
AGAGGTTATGACTGGGAGTTTCATGTCGATGAGACCGAAAGGAGACTTTG
GCGCGTCAATGGAATCGTTCCTCCTCCGTTTGGAAGTGATGCAGAGAAGT
TATGGGCAAAGGAAAACAAGCCGGTCGCTTGGGAA
back to top

Coding sequence (CDS) from alignment at ACJE01000005.1:840853..841287-

>ASPNIDRAFT_143436-T1 ID=ASPNIDRAFT_143436-T1|Name=ASPNIDRAFT_143436-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=433bp|location=Sequence derived from alignment at ACJE01000005.1:840853..841287- (Aspergillus niger ATCC 1015)
ATGCCCCTTTGGCTCATCTACCACCCCTCCGGCACCTTCGAGGACACCGC
TTCCAAAAAAGCTCTGACGGAAGATATCACAAAGCTCTACACTCGAATCG
GCCTTCCTGCCTTCTATGTTGTCATCAATTTTATGAAGCTTCCCCCCGGA
GATACCTGGGTCGGCGCCGAAAACAGAACCGAGAAGCCGTTTATTCGAAT
TGTTGCCGACCACATTGCCGTTCGGCTCGAAAATGAGGACCACGTTTACA
AGAATACGTGCGACGCGATTGAAAAAGCCTTGAAGCCTCACATTGCCGAT
AGAGGTTATGACTGGGAGTTTCATGTCGATGAGACCGAAAGGAGACTTTG
GCGCGTCAATGGAATCGTTCCTCCTCCGTTTGGAAGTGATGCAGAGAAGT
TATGGGCAAAGGAAAACAAGCCGGTCGCTTGGG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143436ASPNIDRAFT_143436Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143436-T1.cdsASPNIDRAFT_143436-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143436-T1.utr3p1ASPNIDRAFT_143436-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143436-T1.exon1ASPNIDRAFT_143436-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143436-T1ASPNIDRAFT_143436-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR014347
DBxrefInterPro:IPR028116
DBxrefPFAM:PF14832
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000005.1supercontigACJE01000005.1:840853..841287 -
Powered by Drupal