You are here

Home

ASPNIDRAFT_143440-T1, ASPNIDRAFT_143440-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_143440-T1
Unique NameASPNIDRAFT_143440-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:366320..367030-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_143440-T1 ID=ASPNIDRAFT_143440-T1|Name=ASPNIDRAFT_143440-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=711bp|location=Sequence derived from alignment at ACJE01000016.1:366320..367030- (Aspergillus niger ATCC 1015)
AAAGCCTCCTCTGTGGAGTCTGAGTCTGTACAGTCAGAGCTACCTGCTAA
TTTTGGAGAGGTCGTGAAAGGGATATATCGCTCTTCCTTTCCCTATCCCT
GGAATCTTACAGCACTCAAGAAGTTGGGTCTGAAGACCATAATGTACGTG
TCTCTGCGGAATTGCACACCCATGACACTTAACTAACAAGGCCTTAGCAC
ACTGGTTGATGAACCGTACCCTCCAAGCCATGTGATGTTCGTCAAGGAGA
ACGGCATTGCACATCACCGCATTTTGGTTCAGGCAAACAAGGACCCTGCT
GTTAAGATACCTGACTCTGTCATGTGTCGAATCCTTGAGCTTCTGCTTGA
TAAAAGCAACCATCCTATTCTCGTCCATTGCAACAAGGGAAAGGTAAGCA
CTTGTTCTTATTTATGGTTAACGCGTAACTAATTGCTCTTGTAGCATCGT
ACTGGATGCGTGGTTGCCTGTTTTCGAAAACTTCAGGCCTGGGATTCATG
CGACGTCATCGAAGAATACCTTCGATATGCTTTTCCGAAACCGAGATTAC
TTGATGAAAACTACATCGACGGATTTGACCCATCCAAACTTCATCAACTT
GCTCAGTCTTCCGGTGTCAAGACGTGGCAGCCATCTGGGCTCTTCAAGAT
GCCATCGGGAGAACAGGATAGAGATAAGGAACTCACTAACTGCCACGTCC
CTCCGTCTCTT
back to top

Coding sequence (CDS) from alignment at ACJE01000016.1:366320..367030-

>ASPNIDRAFT_143440-T1 ID=ASPNIDRAFT_143440-T1|Name=ASPNIDRAFT_143440-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1818bp|location=Sequence derived from alignment at ACJE01000016.1:366320..367030- (Aspergillus niger ATCC 1015)
CATCGTACTGGATGCGTGGTTGCCTGTTTTCGAAAACTTCAGGCCTGGGA
TTCATGCGACGTCATCGAAGAATACCTTCGATATGCTTTTCCGAAACCGA
GATTACTTGATGAAAACTACATCGACGGATTTGACCCATCCAAACTTCAT
CAACTTGCTCAGTCTTCCGGTGTCAAGACGTGGCAGCCATCTGGGCTCTT
CAAGATGCCATCGGGAGAACAGGATAGAGATAAGGAACTCACTAACTGCC
ACGTCCCTCCGTCTCTTCACACTGGTTGATGAACCGTACCCTCCAAGCCA
TGTGATGTTCGTCAAGGAGAACGGCATTGCACATCACCGCATTTTGGTTC
AGGCAAACAAGGACCCTGCTGTTAAGATACCTGACTCTGTCATGTGTCGA
ATCCTTGAGCTTCTGCTTGATAAAAGCAACCATCCTATTCTCGTCCATTG
CAACAAGGGAAAGAAAGCCTCCTCTGTGGAGTCTGAGTCTGTACAGTCAG
AGCTACCTGCTAATTTTGGAGAGGTCGTGAAAGGGATATATCGCTCTTCC
TTTCCCTATCCCTGGAATCTTACAGCACTCAAGAAGTTGGGTCTGAAGAC
CATAATCATCGTACTGGATGCGTGGTTGCCTGTTTTCGAAAACTTCAGGC
CTGGGATTCATGCGACGTCATCGAAGAATACCTTCGATATGCTTTTCCGA
AACCGAGATTACTTGATGAAAACTACATCGACGGATTTGACCCATCCAAA
CTTCATCAACTTGCTCAGTCTTCCGGTGTCAAGACGTGGCAGCCATCTGG
GCTCTTCAAGATGCCATCGGGAGAACAGGATAGAGATAAGGAACTCACTA
ACTGCCACGTCCCTCCGTCTCTTCACACTGGTTGATGAACCGTACCCTCC
AAGCCATGTGATGTTCGTCAAGGAGAACGGCATTGCACATCACCGCATTT
TGGTTCAGGCAAACAAGGACCCTGCTGTTAAGATACCTGACTCTGTCATG
TGTCGAATCCTTGAGCTTCTGCTTGATAAAAGCAACCATCCTATTCTCGT
CCATTGCAACAAGGGAAAGAAAGCCTCCTCTGTGGAGTCTGAGTCTGTAC
AGTCAGAGCTACCTGCTAATTTTGGAGAGGTCGTGAAAGGGATATATCGC
TCTTCCTTTCCCTATCCCTGGAATCTTACAGCACTCAAGAAGTTGGGTCT
GAAGACCATAATCATCGTACTGGATGCGTGGTTGCCTGTTTTCGAAAACT
TCAGGCCTGGGATTCATGCGACGTCATCGAAGAATACCTTCGATATGCTT
TTCCGAAACCGAGATTACTTGATGAAAACTACATCGACGGATTTGACCCA
TCCAAACTTCATCAACTTGCTCAGTCTTCCGGTGTCAAGACGTGGCAGCC
ATCTGGGCTCTTCAAGATGCCATCGGGAGAACAGGATAGAGATAAGGAAC
TCACTAACTGCCACGTCCCTCCGTCTCTTCACACTGGTTGATGAACCGTA
CCCTCCAAGCCATGTGATGTTCGTCAAGGAGAACGGCATTGCACATCACC
GCATTTTGGTTCAGGCAAACAAGGACCCTGCTGTTAAGATACCTGACTCT
GTCATGTGTCGAATCCTTGAGCTTCTGCTTGATAAAAGCAACCATCCTAT
TCTCGTCCATTGCAACAAGGGAAAGAAAGCCTCCTCTGTGGAGTCTGAGT
CTGTACAGTCAGAGCTACCTGCTAATTTTGGAGAGGTCGTGAAAGGGATA
TATCGCTCTTCCTTTCCCTATCCCTGGAATCTTACAGCACTCAAGAAGTT
GGGTCTGAAGACCATAAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016311dephosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0004725protein tyrosine phosphatase activity
GO:0016791phosphatase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143440ASPNIDRAFT_143440Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143440-T1ASPNIDRAFT_143440-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143440-T1.cdsASPNIDRAFT_143440-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143440-T1.exon3ASPNIDRAFT_143440-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_143440-T1.exon2ASPNIDRAFT_143440-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_143440-T1.exon1ASPNIDRAFT_143440-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR016130
DBxrefInterPro:IPR029021
DBxrefInterPro:IPR004861
DBxrefInterPro:IPR020428
DBxrefPFAM:PF03162
DBxrefPFAM:PF00782
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:366320..367030 -
Powered by Drupal