You are here

Home

ASPNIDRAFT_143463-T1, ASPNIDRAFT_143463-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_143463-T1
Unique NameASPNIDRAFT_143463-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:1120976..1121275+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_143463-T1 ID=ASPNIDRAFT_143463-T1|Name=ASPNIDRAFT_143463-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=300bp|location=Sequence derived from alignment at ACJE01000021.1:1120976..1121275+ (Aspergillus niger ATCC 1015)
CATGGCGAGACTCCTCTCCACTGGGCAGTCAAAGGTGGAGACTCCGACAT
GGTAGACCTCCTTCTAACGAAGGGAGTGGCCTCCGATATCGCAGACTCCC
GTGGTCGTACGCCATTATCACGTGCAGCGGGACAAGGACACTGCAGGATC
GTGCAGTTATTGCTATCCACAGGGAGAGCGGATCCAGATAGCAAGGATAG
CCGGGGTCGGACCCCGCTATCCTGGGCTGCCGAAAACTGGCACTTGGATA
CCGTGCGTGCATTGATTGCGCACGGTGCTAGCGCCGATATCCACGACCAC
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:1120976..1121275+

>ASPNIDRAFT_143463-T1 ID=ASPNIDRAFT_143463-T1|Name=ASPNIDRAFT_143463-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=300bp|location=Sequence derived from alignment at ACJE01000021.1:1120976..1121275+ (Aspergillus niger ATCC 1015)
CATGGCGAGACTCCTCTCCACTGGGCAGTCAAAGGTGGAGACTCCGACAT
GGTAGACCTCCTTCTAACGAAGGGAGTGGCCTCCGATATCGCAGACTCCC
GTGGTCGTACGCCATTATCACGTGCAGCGGGACAAGGACACTGCAGGATC
GTGCAGTTATTGCTATCCACAGGGAGAGCGGATCCAGATAGCAAGGATAG
CCGGGGTCGGACCCCGCTATCCTGGGCTGCCGAAAACTGGCACTTGGATA
CCGTGCGTGCATTGATTGCGCACGGTGCTAGCGCCGATATCCACGACCAC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143463ASPNIDRAFT_143463Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143463-T1.exon1ASPNIDRAFT_143463-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143463-T1.cdsASPNIDRAFT_143463-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_143463-T1ASPNIDRAFT_143463-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:1120976..1121275 +
Powered by Drupal