You are here

Home

ASPNIDRAFT_173325-T1, ASPNIDRAFT_173325-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_173325-T1
Unique NameASPNIDRAFT_173325-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1271039..1271591+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_173325-T1 ID=ASPNIDRAFT_173325-T1|Name=ASPNIDRAFT_173325-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=553bp|location=Sequence derived from alignment at ACJE01000010.1:1271039..1271591+ (Aspergillus niger ATCC 1015)
ATGTTCAAGCCCTCGTCGCCCCTCTTCTCGGGTCTTCTTTGGTAGGTCGC
AACCCCATCTGACTGCCCCCTGTCACCCGCCCGGACATCCCGCATTGCTA
TTCCACCCTCATCATCGTCATGCACCGTGAAGCTAATATCACTCGTCAAT
CAAATAGGAAGATCCCGTGGCGTCTCTCCCAACCTCAGAAGGCTCGTCAG
AGGAAGCGCCTCCGTGGTGTTGACCGGGTTGTCGACACTGTCTCCGCCGC
GCTGGAGCGCAATGGATACACCACCAAGGCCGTCGAGCGCTGGTACAGGG
AAATGCCTCGCGAGGAGGAGATGCTGCCCAAGGACAAGTACACACTGTTC
GACAAGAAGGAGAAGAAGTACCGCAAGGGCATTCACAGTACGTTATACTC
CTGGACTTTTCTGCGTCGTCGATGGACCGCCTTTCCCAATCGAGGATCTC
AAACAAAGGGTATTCTTTTCAAATTTCGTGTGCTAATGCTATGTCTCTTC
CAGAGCTACCCAAGTGGACCCGTGTCAGCCAGAGAGTGAACCCTCCGGGT
TTC
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:1271039..1271591+

>ASPNIDRAFT_173325-T1 ID=ASPNIDRAFT_173325-T1|Name=ASPNIDRAFT_173325-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=963bp|location=Sequence derived from alignment at ACJE01000010.1:1271039..1271591+ (Aspergillus niger ATCC 1015)
ATGTTCAAGCCCTCGTCGCCCCTCTTCTCGGGTCTTCTTTGGAAGATCCC
GTGGCGTCTCTCCCAACCTCAGAAGGCTCGTCAGAGGAAGCGCCTCCGTG
GTGTTGACCGGGTTGTCGACACTGTCTCCGCCGCGCTGGAGCGCAATGGA
TACACCACCAAGGCCGTCGAGCGCTGGTACAGGGAAATGCCTCGCGAGGA
GGAGATGCTGCCCAAGGACAAGTACACACTGTTCGACAAGAAGGAGAAGA
AGTACCGCAAGGGCATTCACAAGCTACCCAAGTGGACCCGTGTCAGCCAG
AGAGTGAACCCTCCGGGTTTCATGTTCAAGCCCTCGTCGCCCCTCTTCTC
GGGTCTTCTTTGGAAGATCCCGTGGCGTCTCTCCCAACCTCAGAAGGCTC
GTCAGAGGAAGCGCCTCCGTGGTGTTGACCGGGTTGTCGACACTGTCTCC
GCCGCGCTGGAGCGCAATGGATACACCACCAAGGCCGTCGAGCGCTGGTA
CAGGGAAATGCCTCGCGAGGAGGAGATGCTGCCCAAGGACAAGTACACAC
TGTTCGACAAGAAGGAGAAGAAGTACCGCAAGGGCATTCACAAGCTACCC
AAGTGGACCCGTGTCAGCCAGAGAGTGAACCCTCCGGGTTTCATGTTCAA
GCCCTCGTCGCCCCTCTTCTCGGGTCTTCTTTGGAAGATCCCGTGGCGTC
TCTCCCAACCTCAGAAGGCTCGTCAGAGGAAGCGCCTCCGTGGTGTTGAC
CGGGTTGTCGACACTGTCTCCGCCGCGCTGGAGCGCAATGGATACACCAC
CAAGGCCGTCGAGCGCTGGTACAGGGAAATGCCTCGCGAGGAGGAGATGC
TGCCCAAGGACAAGTACACACTGTTCGACAAGAAGGAGAAGAAGTACCGC
AAGGGCATTCACAAGCTACCCAAGTGGACCCGTGTCAGCCAGAGAGTGAA
CCCTCCGGGTTTC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173325ASPNIDRAFT_173325Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173325-T1.exon1ASPNIDRAFT_173325-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_173325-T1.exon2ASPNIDRAFT_173325-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_173325-T1.exon3ASPNIDRAFT_173325-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173325-T1.cdsASPNIDRAFT_173325-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_173325-T1ASPNIDRAFT_173325-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000101.3
NoteEggNog:ENOG41
DBxrefInterPro:IPR016340
DBxrefPFAM:PF09784
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1271039..1271591 +
Powered by Drupal