You are here

Home

ASPNIDRAFT_174332-T1, ASPNIDRAFT_174332-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_174332-T1
Unique NameASPNIDRAFT_174332-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1499118..1500670+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_174332-T1 ID=ASPNIDRAFT_174332-T1|Name=ASPNIDRAFT_174332-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1553bp|location=Sequence derived from alignment at ACJE01000010.1:1499118..1500670+ (Aspergillus niger ATCC 1015)
ATGCCTATGCCTCAGTACACCATGCAGCCTCAATACCCTGTGTCCCAGCC
GCATACTCTTCCCCCGCTGCAGCCTCATCACAGTCAATCCCCTGTCCCTC
ACTCCTACATGGGCCAGCCGTACCGGCCGGATCTGTCGAGGTATCCCGCA
TCTACTCACGATGTCTACGCGTCTTCCGCGGCTCCTATCATGCCTCACAC
CACCGTGGGTAGTCTGCCTCCCTCGTCGTTCCTGTCCCATCCCAATCCGC
AGGCACAACCCCAGCCGTCGCAACCTTACCCTCCGCCTCATAGCGTGCTG
CCTCCCGCGTCCAGCGCGCAGACCTATCCCCAGCCGATTGCGCCGGCGCC
TCCGCGTGATCGTCGCTCGGATTTCTCCGGTCTTCCGTCAGGTGCTTTCA
GCTACTCCGATAACAAGGGAACGCCTTGGATGAACCCCGACCCTGTTGCA
AGTGCAAACGGTGCTCCCCCGTATGCTGCGAAGGAACCTCCCAGGACACA
GGTTGTTGGGTCGCAGGGCCGCCGCGGAATTTTGCCGAGCGTTCCGGGAC
GCGCGACTCCCGTCACGAACGGTGTCAATGGTACCGCGAAGAACACTACC
ATTCCGGCCAAGGATGCGGACGGAAAGTTCCCTTGCCCGCACTGTAACAA
GACCTATCTTCATGCGAAGCATCTGAAGCGCCATTTGCTCAGACGTGAGT
GCCCCTCCTTCCATCTGGATAATTCGGTAGCGCATGGCGGGGATTGAATC
GTTCCGATGACTAATCTTTGTTTTCTTCGGTAGACACTGGAGACCGTCCG
TACATGTGTGTGCTCTGCAAGGATACCTTTTCTCGCAGTGATATTCTCAA
GCGTCACTTCCAGAAGTGCTCGTTGCGACGTGGTAACCCTACTGGGGCGA
CTCACCTGTCGCACCCTCAGGCACACTTGAAGCGGTCTCAAGCTGCGCAG
AATGCCGTTAAGCCCGTTCAGGATGAAGTCAATACCACCGTCCCGCATCC
CAACGGTATGCCGGGTGCTACGTATGGCGAGGCGCCCGTGAATGGCAATG
GCATGGCTCCCGGTCGCCCCGGATATCCGGAACAGCAGCCTTTGGGTTTC
TCCATGCCTTCCGTCAATGGGATGAACCGTGGTCAGCCCGAAGACGCGTT
CCCGGGCGGACAGCCTCACCAGCGTGGACCCTGGCTTGCTGCTCCCAAGC
AGAACCCGTACATGGTGCAGCCTGGCGCAGATGCAACTGGCCAGCAGCTG
AATGTTGATCGTCCTCCTATTGAGCAGGTAAAGCCCCCGGTTGTTCAAGA
CCCTAAACGTCCTGTCATGCCTGGACCTCCCAATCACGCTGGCGAAATTG
ACTGGACTTCGATGTTTCAGCCCGGAGCGTCCGACGGTTACATCAATCCC
GTCTTCCCCCAGACCATGGCGTCCGGCCAGGAGCCTATCCACGCTCACGT
CGATACCGAACGCAAGTTTTACCCCACCACCACCGCTGGTCCCCAGGAGG
GTGGGATGAACGGTCTCTACCTGGCTTCGACCACGTTGAGTGGCGACGGT
AAG
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:1499118..1500670+

>ASPNIDRAFT_174332-T1 ID=ASPNIDRAFT_174332-T1|Name=ASPNIDRAFT_174332-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2922bp|location=Sequence derived from alignment at ACJE01000010.1:1499118..1500670+ (Aspergillus niger ATCC 1015)
ATGCCTATGCCTCAGTACACCATGCAGCCTCAATACCCTGTGTCCCAGCC
GCATACTCTTCCCCCGCTGCAGCCTCATCACAGTCAATCCCCTGTCCCTC
ACTCCTACATGGGCCAGCCGTACCGGCCGGATCTGTCGAGGTATCCCGCA
TCTACTCACGATGTCTACGCGTCTTCCGCGGCTCCTATCATGCCTCACAC
CACCGTGGGTAGTCTGCCTCCCTCGTCGTTCCTGTCCCATCCCAATCCGC
AGGCACAACCCCAGCCGTCGCAACCTTACCCTCCGCCTCATAGCGTGCTG
CCTCCCGCGTCCAGCGCGCAGACCTATCCCCAGCCGATTGCGCCGGCGCC
TCCGCGTGATCGTCGCTCGGATTTCTCCGGTCTTCCGTCAGGTGCTTTCA
GCTACTCCGATAACAAGGGAACGCCTTGGATGAACCCCGACCCTGTTGCA
AGTGCAAACGGTGCTCCCCCGTATGCTGCGAAGGAACCTCCCAGGACACA
GGTTGTTGGGTCGCAGGGCCGCCGCGGAATTTTGCCGAGCGTTCCGGGAC
GCGCGACTCCCGTCACGAACGGTGTCAATGGTACCGCGAAGAACACTACC
ATTCCGGCCAAGGATGCGGACGGAAAGTTCCCTTGCCCGCACTGTAACAA
GACCTATCTTCATGCGAAGCATCTGAAGCGCCATTTGCTCAGACACACTG
GAGACCGTCCGTACATGTGTGTGCTCTGCAAGGATACCTTTTCTCGCAGT
GATATTCTCAAGCGTCACTTCCAGAAGTGCTCGTTGCGACGTGGTAACCC
TACTGGGGCGACTCACCTGTCGCACCCTCAGGCACACTTGAAGCGGTCTC
AAGCTGCGCAGAATGCCGTTAAGCCCGTTCAGGATGAAGTCAATACCACC
GTCCCGCATCCCAACGGTATGCCGGGTGCTACGTATGGCGAGGCGCCCGT
GAATGGCAATGGCATGGCTCCCGGTCGCCCCGGATATCCGGAACAGCAGC
CTTTGGGTTTCTCCATGCCTTCCGTCAATGGGATGAACCGTGGTCAGCCC
GAAGACGCGTTCCCGGGCGGACAGCCTCACCAGCGTGGACCCTGGCTTGC
TGCTCCCAAGCAGAACCCGTACATGGTGCAGCCTGGCGCAGATGCAACTG
GCCAGCAGCTGAATGTTGATCGTCCTCCTATTGAGCAGGTAAAGCCCCCG
GTTGTTCAAGACCCTAAACGTCCTGTCATGCCTGGACCTCCCAATCACGC
TGGCGAAATTGACTGGACTTCGATGTTTCAGCCCGGAGCGTCCGACGGTT
ACATCAATCCCGTCTTCCCCCAGACCATGGCGTCCGGCCAGGAGCCTATC
CACGCTCACGTCGATACCGAACGCAAGTTTTACCCCACCACCACCGCTGG
TCCCCAGGAGGGTGGGATGAACGGTCTCTACCTGGCTTCGACCACGTTGA
GTGGCGACGGTATGCCTATGCCTCAGTACACCATGCAGCCTCAATACCCT
GTGTCCCAGCCGCATACTCTTCCCCCGCTGCAGCCTCATCACAGTCAATC
CCCTGTCCCTCACTCCTACATGGGCCAGCCGTACCGGCCGGATCTGTCGA
GGTATCCCGCATCTACTCACGATGTCTACGCGTCTTCCGCGGCTCCTATC
ATGCCTCACACCACCGTGGGTAGTCTGCCTCCCTCGTCGTTCCTGTCCCA
TCCCAATCCGCAGGCACAACCCCAGCCGTCGCAACCTTACCCTCCGCCTC
ATAGCGTGCTGCCTCCCGCGTCCAGCGCGCAGACCTATCCCCAGCCGATT
GCGCCGGCGCCTCCGCGTGATCGTCGCTCGGATTTCTCCGGTCTTCCGTC
AGGTGCTTTCAGCTACTCCGATAACAAGGGAACGCCTTGGATGAACCCCG
ACCCTGTTGCAAGTGCAAACGGTGCTCCCCCGTATGCTGCGAAGGAACCT
CCCAGGACACAGGTTGTTGGGTCGCAGGGCCGCCGCGGAATTTTGCCGAG
CGTTCCGGGACGCGCGACTCCCGTCACGAACGGTGTCAATGGTACCGCGA
AGAACACTACCATTCCGGCCAAGGATGCGGACGGAAAGTTCCCTTGCCCG
CACTGTAACAAGACCTATCTTCATGCGAAGCATCTGAAGCGCCATTTGCT
CAGACACACTGGAGACCGTCCGTACATGTGTGTGCTCTGCAAGGATACCT
TTTCTCGCAGTGATATTCTCAAGCGTCACTTCCAGAAGTGCTCGTTGCGA
CGTGGTAACCCTACTGGGGCGACTCACCTGTCGCACCCTCAGGCACACTT
GAAGCGGTCTCAAGCTGCGCAGAATGCCGTTAAGCCCGTTCAGGATGAAG
TCAATACCACCGTCCCGCATCCCAACGGTATGCCGGGTGCTACGTATGGC
GAGGCGCCCGTGAATGGCAATGGCATGGCTCCCGGTCGCCCCGGATATCC
GGAACAGCAGCCTTTGGGTTTCTCCATGCCTTCCGTCAATGGGATGAACC
GTGGTCAGCCCGAAGACGCGTTCCCGGGCGGACAGCCTCACCAGCGTGGA
CCCTGGCTTGCTGCTCCCAAGCAGAACCCGTACATGGTGCAGCCTGGCGC
AGATGCAACTGGCCAGCAGCTGAATGTTGATCGTCCTCCTATTGAGCAGG
TAAAGCCCCCGGTTGTTCAAGACCCTAAACGTCCTGTCATGCCTGGACCT
CCCAATCACGCTGGCGAAATTGACTGGACTTCGATGTTTCAGCCCGGAGC
GTCCGACGGTTACATCAATCCCGTCTTCCCCCAGACCATGGCGTCCGGCC
AGGAGCCTATCCACGCTCACGTCGATACCGAACGCAAGTTTTACCCCACC
ACCACCGCTGGTCCCCAGGAGGGTGGGATGAACGGTCTCTACCTGGCTTC
GACCACGTTGAGTGGCGACGGT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_174332ASPNIDRAFT_174332Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_174332-T1.exon1ASPNIDRAFT_174332-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_174332-T1.exon2ASPNIDRAFT_174332-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_174332-T1.cdsASPNIDRAFT_174332-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_174332-T1.utr3p1ASPNIDRAFT_174332-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_174332-T1ASPNIDRAFT_174332-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1499118..1500670 +
Powered by Drupal