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ASPNIDRAFT_174727-T1, ASPNIDRAFT_174727-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_174727-T1
Unique NameASPNIDRAFT_174727-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:2692480..2694340-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_174727-T1 ID=ASPNIDRAFT_174727-T1|Name=ASPNIDRAFT_174727-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1861bp|location=Sequence derived from alignment at ACJE01000010.1:2692480..2694340- (Aspergillus niger ATCC 1015)
ATGTTTCCTGAGAAACGAACAGATCGTGTCTACTGGCTACAGGATACATC
CCTGGCCAAGATTATAGCACGGTGTCTGCTCCTGGGCTGTTCACGGCGGC
AGGAGCTGGAGCGTTGGCGTGTCTCCGGGGGCGTAGACCTGGGACAATGC
GTGGAGAATGTCATGCGGCAGGCTGAAAACCATGTCACCAACGGCCAAGA
TGTCACTGTGGAGGAGATAGACAAAGCTCTAGCTGAAATCGCCTCTCGTT
GCAAGTTTTCTGGTCCTCGGGTGCGAAGGCAGCGTACGGCAGTCAAGGTC
GATCAGACGCTGTCCTCATTATATCGACGACTAAGTAGCAGAGATGCGAA
ATGGCTTACACGGATGATACTAAAAAGTTATTCTCCTGTTTCTCTACCGA
CAAACATGATCTTGAAACGCTTCCATTTCCTTCTTCCACATCTGCTTCTC
TTTCAGGACTCTTTCGAACGCGCTTTAAGCGTGCTGGGTACTAGCCCAAT
AAGACACTTCCCGCCTCAACCAGAGCCTGCATTAGCCAAAGACCTGGGGT
TCATCGCGTTAGGGCATCTCAGTCCTGCTGTGGGAGTCAAGATAGGACGA
CCCGAGTACTATAAGGCTAGGAGCATCAAGCATTGCTGTCGCATGGTCGG
CAACCGTCGTATGAGTATCGAAAGGAAGTATGATGGTGAATATTGCCAGA
TACATATCGATCTCTCCAAGGACTCCAACTGGATTCAAATATTTTCTAAA
AGCGGTAAAGATTCAACAGCAGACCGCGCCGGTATCCATCAAGTCATCAA
CGAGTCTTTGAACCTAAGACGGCCGGGTTGCAAGGTTTCCCGGCGATGCA
TTCTGGAGGGCGAACTGCTTGTTTGGAGTGATAAGCATGGCAAGATCGCA
GATTTTCATAAGTTGCGTAAGTTCATATCGCGTTCAGGCACTTTCATTGG
AACTGAAAGCGACTCCCCGTAAGTGGCACGGCATGTAGTTTCCAGCGCTG
TCTTCTGACTCTGCAAATAGCCCACAACCTTATGAGCATCTGATGATAGT
ATTTTTTGACATCCTGCTCATCGATGACAATGTTTGTCTGAGGCTCCCAC
ACCGGGAGCGGAGATTGCTTCTGAAAGACATTATAGAGCCAATCCCAGGA
CGTGCGGATATATCTGAGCAGTGGGTTGTTGACTTTTCCCATCATGGCGG
TCAATCTCGACTAGAAAGTGTCTTCCACAAAGGCATCGATGAGCGATGGG
AAGGATTTGTCCTAAAAGCATGTGAAGATCCTTACTTTACAATATTTTCT
GATGACAAGGACAATCCCTCCTTCGGTCGCTGGATCAAGCTAAAGAAGGA
TTATATACCCGGACTGGGTGATACCGTCGACCTCGCAATCATCGGCGCGA
GGTATAACTCTCGGGATGCTATGGCAATCAAGCAAGTCAAAAAGCTATTA
TGGACTGAATTCTTCATTGGATGCCTCGTCAATGAAGAGATGGTTGTTCA
ATGTGGAGCCATACCAAAATTTCGGGTGCTGGATGTTATCAACCACAAAT
GCATGCATGTCAGATTCATGCAGTTCTTAAACCAATACGGCGAATTCTGC
GCGCGCAGTCCAGACTCCGAACACGGATTCAATCTTGAATACGGAGAGAG
TGTAGTCAACCCTATGGACGTCGTCTTCAAAACACCCTTTGTCGTTGAGA
TGTTAGGCAGTGGCTTCGAAAAGCCGTCTGGCGCCAGATACTATACACTG
CGTTTCCCTAGGATCTTGAAGGTCCTTTCTGACCGATCATTTGAGGACGC
TGCGTCATATAGAGAGTTGCAGTTATTAGCAGAAACCGCTCGAACCGTCC
TTGATGAGGAT
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Coding sequence (CDS) from alignment at ACJE01000010.1:2692480..2694340-

>ASPNIDRAFT_174727-T1 ID=ASPNIDRAFT_174727-T1|Name=ASPNIDRAFT_174727-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3608bp|location=Sequence derived from alignment at ACJE01000010.1:2692480..2694340- (Aspergillus niger ATCC 1015)
CCCACAACCTTATGAGCATCTGATGATAGTATTTTTTGACATCCTGCTCA
TCGATGACAATGTTTGTCTGAGGCTCCCACACCGGGAGCGGAGATTGCTT
CTGAAAGACATTATAGAGCCAATCCCAGGACGTGCGGATATATCTGAGCA
GTGGGTTGTTGACTTTTCCCATCATGGCGGTCAATCTCGACTAGAAAGTG
TCTTCCACAAAGGCATCGATGAGCGATGGGAAGGATTTGTCCTAAAAGCA
TGTGAAGATCCTTACTTTACAATATTTTCTGATGACAAGGACAATCCCTC
CTTCGGTCGCTGGATCAAGCTAAAGAAGGATTATATACCCGGACTGGGTG
ATACCGTCGACCTCGCAATCATCGGCGCGAGGTATAACTCTCGGGATGCT
ATGGCAATCAAGCAAGTCAAAAAGCTATTATGGACTGAATTCTTCATTGG
ATGCCTCGTCAATGAAGAGATGGTTGTTCAATGTGGAGCCATACCAAAAT
TTCGGGTGCTGGATGTTATCAACCACAAATGCATGCATGTCAGATTCATG
CAGTTCTTAAACCAATACGGCGAATTCTGCGCGCGCAGTCCAGACTCCGA
ACACGGATTCAATCTTGAATACGGAGAGAGTGTAGTCAACCCTATGGACG
TCGTCTTCAAAACACCCTTTGTCGTTGAGATGTTAGGCAGTGGCTTCGAA
AAGCCGTCTGGCGCCAGATACTATACACTGCGTTTCCCTAGGATCTTGAA
GGTCCTTTCTGACCGATCATTTGAGGACGCTGCGTCATATAGAGAGTTGC
AGTTATTAGCAGAAACCGCTCGAACCGTCCTTGATGATGTTTCCTGAGAA
ACGAACAGATCGTGTCTACTGGCTACAGGATACATCCCTGGCCAAGATTA
TAGCACGGTGTCTGCTCCTGGGCTGTTCACGGCGGCAGGAGCTGGAGCGT
TGGCGTGTCTCCGGGGGCGTAGACCTGGGACAATGCGTGGAGAATGTCAT
GCGGCAGGCTGAAAACCATGTCACCAACGGCCAAGATGTCACTGTGGAGG
AGATAGACAAAGCTCTAGCTGAAATCGCCTCTCGTTGCAAGTTTTCTGGT
CCTCGGGTGCGAAGGCAGCGTACGGCAGTCAAGGTCGATCAGACGCTGTC
CTCATTATATCGACGACTAAGTAGCAGAGATGCGAAATGGCTTACACGGA
TGATACTAAAAAGTTATTCTCCTGTTTCTCTACCGACAAACATGATCTTG
AAACGCTTCCATTTCCTTCTTCCACATCTGCTTCTCTTTCAGGACTCTTT
CGAACGCGCTTTAAGCGTGCTGGGTACTAGCCCAATAAGACACTTCCCGC
CTCAACCAGAGCCTGCATTAGCCAAAGACCTGGGGTTCATCGCGTTAGGG
CATCTCAGTCCTGCTGTGGGAGTCAAGATAGGACGACCCGAGTACTATAA
GGCTAGGAGCATCAAGCATTGCTGTCGCATGGTCGGCAACCGTCGTATGA
GTATCGAAAGGAAGTATGATGGTGAATATTGCCAGATACATATCGATCTC
TCCAAGGACTCCAACTGGATTCAAATATTTTCTAAAAGCGGTAAAGATTC
AACAGCAGACCGCGCCGGTATCCATCAAGTCATCAACGAGTCTTTGAACC
TAAGACGGCCGGGTTGCAAGGTTTCCCGGCGATGCATTCTGGAGGGCGAA
CTGCTTGTTTGGAGTGATAAGCATGGCAAGATCGCAGATTTTCATAAGTT
GCGTAAGTTCATATCGCGTTCAGGCACTTTCATTGGAACTGAAAGCGACT
CCCCCCCACAACCTTATGAGCATCTGATGATAGTATTTTTTGACATCCTG
CTCATCGATGACAATGTTTGTCTGAGGCTCCCACACCGGGAGCGGAGATT
GCTTCTGAAAGACATTATAGAGCCAATCCCAGGACGTGCGGATATATCTG
AGCAGTGGGTTGTTGACTTTTCCCATCATGGCGGTCAATCTCGACTAGAA
AGTGTCTTCCACAAAGGCATCGATGAGCGATGGGAAGGATTTGTCCTAAA
AGCATGTGAAGATCCTTACTTTACAATATTTTCTGATGACAAGGACAATC
CCTCCTTCGGTCGCTGGATCAAGCTAAAGAAGGATTATATACCCGGACTG
GGTGATACCGTCGACCTCGCAATCATCGGCGCGAGGTATAACTCTCGGGA
TGCTATGGCAATCAAGCAAGTCAAAAAGCTATTATGGACTGAATTCTTCA
TTGGATGCCTCGTCAATGAAGAGATGGTTGTTCAATGTGGAGCCATACCA
AAATTTCGGGTGCTGGATGTTATCAACCACAAATGCATGCATGTCAGATT
CATGCAGTTCTTAAACCAATACGGCGAATTCTGCGCGCGCAGTCCAGACT
CCGAACACGGATTCAATCTTGAATACGGAGAGAGTGTAGTCAACCCTATG
GACGTCGTCTTCAAAACACCCTTTGTCGTTGAGATGTTAGGCAGTGGCTT
CGAAAAGCCGTCTGGCGCCAGATACTATACACTGCGTTTCCCTAGGATCT
TGAAGGTCCTTTCTGACCGATCATTTGAGGACGCTGCGTCATATAGAGAG
TTGCAGTTATTAGCAGAAACCGCTCGAACCGTCCTTGATGATGTTTCCTG
AGAAACGAACAGATCGTGTCTACTGGCTACAGGATACATCCCTGGCCAAG
ATTATAGCACGGTGTCTGCTCCTGGGCTGTTCACGGCGGCAGGAGCTGGA
GCGTTGGCGTGTCTCCGGGGGCGTAGACCTGGGACAATGCGTGGAGAATG
TCATGCGGCAGGCTGAAAACCATGTCACCAACGGCCAAGATGTCACTGTG
GAGGAGATAGACAAAGCTCTAGCTGAAATCGCCTCTCGTTGCAAGTTTTC
TGGTCCTCGGGTGCGAAGGCAGCGTACGGCAGTCAAGGTCGATCAGACGC
TGTCCTCATTATATCGACGACTAAGTAGCAGAGATGCGAAATGGCTTACA
CGGATGATACTAAAAAGTTATTCTCCTGTTTCTCTACCGACAAACATGAT
CTTGAAACGCTTCCATTTCCTTCTTCCACATCTGCTTCTCTTTCAGGACT
CTTTCGAACGCGCTTTAAGCGTGCTGGGTACTAGCCCAATAAGACACTTC
CCGCCTCAACCAGAGCCTGCATTAGCCAAAGACCTGGGGTTCATCGCGTT
AGGGCATCTCAGTCCTGCTGTGGGAGTCAAGATAGGACGACCCGAGTACT
ATAAGGCTAGGAGCATCAAGCATTGCTGTCGCATGGTCGGCAACCGTCGT
ATGAGTATCGAAAGGAAGTATGATGGTGAATATTGCCAGATACATATCGA
TCTCTCCAAGGACTCCAACTGGATTCAAATATTTTCTAAAAGCGGTAAAG
ATTCAACAGCAGACCGCGCCGGTATCCATCAAGTCATCAACGAGTCTTTG
AACCTAAGACGGCCGGGTTGCAAGGTTTCCCGGCGATGCATTCTGGAGGG
CGAACTGCTTGTTTGGAGTGATAAGCATGGCAAGATCGCAGATTTTCATA
AGTTGCGTAAGTTCATATCGCGTTCAGGCACTTTCATTGGAACTGAAAGC
GACTCCCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003677DNA binding
GO:0003910DNA ligase (ATP) activity
Vocabulary: Biological Process
TermDefinition
GO:0006310DNA recombination
GO:0006281DNA repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_174727ASPNIDRAFT_174727Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_174727-T1ASPNIDRAFT_174727-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_174727-T1.cdsASPNIDRAFT_174727-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_174727-T1.utr3p1ASPNIDRAFT_174727-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_174727-T1.exon2ASPNIDRAFT_174727-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_174727-T1.exon1ASPNIDRAFT_174727-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR012310
DBxrefInterPro:IPR012308
DBxrefInterPro:IPR036599
DBxrefPFAM:PF04675
DBxrefPFAM:PF01068
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:2692480..2694340 -
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