You are here

Home

ASPNIDRAFT_175137-T1, ASPNIDRAFT_175137-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_175137-T1
Unique NameASPNIDRAFT_175137-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:2218672..2220174+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_175137-T1 ID=ASPNIDRAFT_175137-T1|Name=ASPNIDRAFT_175137-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1503bp|location=Sequence derived from alignment at ACJE01000010.1:2218672..2220174+ (Aspergillus niger ATCC 1015)
ATGGCTCCACCAAGACCTCCCTACGTCTGCATCAATTGCAGGCTGTTCGG
CCGTCGTCCGTTCTCCTCGTCTACCCGACGAGCAGACATCATCCGCCCCG
CGACGGCCCCCAAACCCACCCCCGACATCAAGCACATCCGCCAAAACCCA
GAGCTCTACTCCAAGAACTGCGTCGACCGCAATTATCCCGCCCACGCAGA
ATACCCTCTCAAGATCCAGCAGCTGACCGACGAAGCGCGACGTCTCGACC
AAGATCTCAAGACCCCTCGAGCCCGCATCAAGGAATTGGAGAAAGCCATC
GCCAAGGTCGCCAGTGCCGCCAACAATGACTCTTCCTCCGACCTGACCTC
CCTCCGCGCCGAGGCCACTCGTCTCAAAGATGACTCCAACAACATGTCAA
CCCGGAAAACCACCTGCACCGAGGAAATCCACCGACTCGCCCTATCCCTC
CCCAACCTCTCCTCCACCTACACCCCCATCGGCGCCGACCCAACCCTGAT
CAACTACATCAACTTCGACCCCCAATCACCCCCGGAATGGGTGACACGCC
CCGATCCAAACCGCTCCCACGTCACCATCGGCACCAAGCTCGGTCTCCTC
GACTTCACCAGCTCGGCCATCACCACCGGCTGGGGCTGGTACTTCCTGAC
CAACGAAGGCGCCCTCCTCGAACAAGCCCTCGTCCAATACGCCCTCAGCG
TGGCCCGCCGCCACGGCTGGAAAGCCGTGTCACCTCCCTCGCTCGTATAC
TCCTACATCGCCGAAGCCTGCGGCTTCCAGCCGCGCGACCAGCACAACGA
GCAACAGATCTGGACCATCGAGCAAACCGAAAAGGACAAGTCCAAGCCCC
AACGCTCCCTCGCCGGCACCGCCGAGATCCCTCTCGCAGCCATGCACGCC
GGCCGCGACATCCCCGCCAGTCAACTCCCCCTCCGTCTCGTCGGCCCCAG
CCGGTGCTACCGCGCCGAAGCCGGCTCCCGCGGCGTCGACACCAAGGGTC
TGTACCGTGTGCACGAATTCACCAAGGTCGAGATGTTCGCCTGGGCGGAT
AACCTCCCTGACTCTACCAGTACCACATCCACCTCGGACGACCTCTTCGC
AGAGCTCCTCTCCATCCAGACGGAGATCCTCACCGCGCTGAACCTCCCCG
CCCGTGTCCTGGAGATGCCCACCTCCGACTTGGGCGCCAGCGCCAGCCGC
AAACGCGATATCGAAGTCCTCTTCCCGTCGAGACTGCGTGCCGGGGACCT
TGAGTCTGGCTGGGGCGAGGTCACTTCCGCGTCTATCTGTACCGATTACC
AGAGTCGTCGGCTGGGGACCCGTGTGCGTGGCGGAGCAGCTAAGGAGTCG
CGGTTCCCGCATACGGTGAATGGAACGGCGATGGCGGTTCCTCGCGTGCT
GGCTGCTATTCTGGAGATTGGATGGGATGCGGAGAGAGGAGTGGTGGTTG
TGCCGGAGGTGTTGAGGGGGTTTATGGGCGGGTTGGAGGTTATTGGGGAG
CAG
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:2218672..2220174+

>ASPNIDRAFT_175137-T1 ID=ASPNIDRAFT_175137-T1|Name=ASPNIDRAFT_175137-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1503bp|location=Sequence derived from alignment at ACJE01000010.1:2218672..2220174+ (Aspergillus niger ATCC 1015)
ATGGCTCCACCAAGACCTCCCTACGTCTGCATCAATTGCAGGCTGTTCGG
CCGTCGTCCGTTCTCCTCGTCTACCCGACGAGCAGACATCATCCGCCCCG
CGACGGCCCCCAAACCCACCCCCGACATCAAGCACATCCGCCAAAACCCA
GAGCTCTACTCCAAGAACTGCGTCGACCGCAATTATCCCGCCCACGCAGA
ATACCCTCTCAAGATCCAGCAGCTGACCGACGAAGCGCGACGTCTCGACC
AAGATCTCAAGACCCCTCGAGCCCGCATCAAGGAATTGGAGAAAGCCATC
GCCAAGGTCGCCAGTGCCGCCAACAATGACTCTTCCTCCGACCTGACCTC
CCTCCGCGCCGAGGCCACTCGTCTCAAAGATGACTCCAACAACATGTCAA
CCCGGAAAACCACCTGCACCGAGGAAATCCACCGACTCGCCCTATCCCTC
CCCAACCTCTCCTCCACCTACACCCCCATCGGCGCCGACCCAACCCTGAT
CAACTACATCAACTTCGACCCCCAATCACCCCCGGAATGGGTGACACGCC
CCGATCCAAACCGCTCCCACGTCACCATCGGCACCAAGCTCGGTCTCCTC
GACTTCACCAGCTCGGCCATCACCACCGGCTGGGGCTGGTACTTCCTGAC
CAACGAAGGCGCCCTCCTCGAACAAGCCCTCGTCCAATACGCCCTCAGCG
TGGCCCGCCGCCACGGCTGGAAAGCCGTGTCACCTCCCTCGCTCGTATAC
TCCTACATCGCCGAAGCCTGCGGCTTCCAGCCGCGCGACCAGCACAACGA
GCAACAGATCTGGACCATCGAGCAAACCGAAAAGGACAAGTCCAAGCCCC
AACGCTCCCTCGCCGGCACCGCCGAGATCCCTCTCGCAGCCATGCACGCC
GGCCGCGACATCCCCGCCAGTCAACTCCCCCTCCGTCTCGTCGGCCCCAG
CCGGTGCTACCGCGCCGAAGCCGGCTCCCGCGGCGTCGACACCAAGGGTC
TGTACCGTGTGCACGAATTCACCAAGGTCGAGATGTTCGCCTGGGCGGAT
AACCTCCCTGACTCTACCAGTACCACATCCACCTCGGACGACCTCTTCGC
AGAGCTCCTCTCCATCCAGACGGAGATCCTCACCGCGCTGAACCTCCCCG
CCCGTGTCCTGGAGATGCCCACCTCCGACTTGGGCGCCAGCGCCAGCCGC
AAACGCGATATCGAAGTCCTCTTCCCGTCGAGACTGCGTGCCGGGGACCT
TGAGTCTGGCTGGGGCGAGGTCACTTCCGCGTCTATCTGTACCGATTACC
AGAGTCGTCGGCTGGGGACCCGTGTGCGTGGCGGAGCAGCTAAGGAGTCG
CGGTTCCCGCATACGGTGAATGGAACGGCGATGGCGGTTCCTCGCGTGCT
GGCTGCTATTCTGGAGATTGGATGGGATGCGGAGAGAGGAGTGGTGGTTG
TGCCGGAGGTGTTGAGGGGGTTTATGGGCGGGTTGGAGGTTATTGGGGAG
CAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0004828serine-tRNA ligase activity
Vocabulary: Biological Process
TermDefinition
GO:0006418tRNA aminoacylation for protein translation
GO:0006434seryl-tRNA aminoacylation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_175137ASPNIDRAFT_175137Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_175137-T1.exon1ASPNIDRAFT_175137-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_175137-T1.cdsASPNIDRAFT_175137-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_175137-T1ASPNIDRAFT_175137-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010978
DBxrefInterPro:IPR006195
DBxrefInterPro:IPR015866
DBxrefInterPro:IPR042103
DBxrefInterPro:IPR002314
DBxrefInterPro:IPR002317
DBxrefPFAM:PF00587
DBxrefPFAM:PF02403
Productseryl-tRNA synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:2218672..2220174 +
Powered by Drupal