You are here

Home

ASPNIDRAFT_176409-T1, ASPNIDRAFT_176409-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_176409-T1
Unique NameASPNIDRAFT_176409-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:3081043..3082655+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_176409-T1 ID=ASPNIDRAFT_176409-T1|Name=ASPNIDRAFT_176409-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1613bp|location=Sequence derived from alignment at ACJE01000021.1:3081043..3082655+ (Aspergillus niger ATCC 1015)
ATGCCCGACATCGCATCCAACGGTGCCCGCAACGGCGCCTCCCAGAATGC
AGAGACCAAGCCAGAACCCCCCGTTCTCCATGTGGTAGACAGCCGCACGG
GGAAGTACTTCCCCATCCCTATCGTGCGCAACGCCATCAACGCGAGCGAA
TTCAAGAAACTCAAGTCCCCCGAGGATCCCGCACATCCTGAAGATCAGAA
CGAGCAGGGCATCCGGGTGTTTGACCCCGGATACTCCAACACGGCTGTTA
GTGAGAGCCAGGTTACCTACATGTGCGTTTTCTCTGCTGCATAGGATTGA
TTATGGCGAAGAGTAACTGATAACGGGGCGCAGCGATGGCCTGAAGGGAA
CCATCCAGTACCGTGGTTACAACATCGAGGATATTGTGGGCAAGAAGAAG
TTTATCGACACGGCACACCTGCTCATTTGGGGAGAATGGCCGACGCCGGA
ACAGGCCAAGTCTCTGCAGGAGAAGCTCTCCAGCGTACCTGTCCTGGATG
AATCCGTCTTCAAAGTCATTCAGGCATTCCCGTAAGCTTCACCCTAGTTT
TAGCCTCTAATGCTCTCCCCCCACAGTCTAACGGCTCCAGTCCCAACTCG
TCCATCATCGGCATGATGATCGCCGCTCTGTCAGCTGTCCAGAGTACCCA
GATGGATCGCATCCCCGCCCATGCGGCCAAGAACCTCTACTTGGGCAATC
CCAAGGCCGTCGATGATGAGATCGTCCGTCTGATGGGCTCGCTGTCCATG
ATCACCGCTGCTGTCTACTGCCACCATACCGGACGGGAATTTACCCCGCC
ACGTCCGGAACTCTCCTACATCGAGAACTTCCTGTTGATGATGGGCCACG
TCGAGTCTAGCACAGGACTGCCAAACCCCCAGTACGTCGACCGCATTGAG
CGTCTCTGGGTCCTCATTGCCGATCACGAGATGACCTGCTCGACTGCTGC
GTTCTTGCAGACGGCCTCCTCCCTGCCGGATGTATTCTCCTGTATGATCT
CCGCACTTTCGGCGCTCTATGGTCCGCTGCATGGTGGGGCCATTGAGGTA
GCTTACAAAAATTTCGAGGAGATTGGCTCGGTTGAGAACGTCGCGGCCAA
GATAGAACGTGTCAAGGCCGGTAAGGAGCGTCTGTACGGCTACGGTCACC
GCATCTACCGCGTCACAGACCCGCGCTTCATCTTCATCCGCCAGATCTTA
GACGAGTTGAAGGAAGAGATCGCCCGGAACCCGCTGCTGAAGGTGGCGTT
TGAGGTGGACCGCGTCGCCTCGGAGGATGAATACTTTGTCACCCGAAAGC
TACGGCCCAACGCCGATCTCTTTGCGGCGCTTGTGTATAGTGCCATGTAG
GCAGCTTCCGTGAAGTAGTGGTTTCAGACATCAGACCCGCTAACGCATTG
GAAATAGGGGCTTCCCGACTGAGTTTATTCTACCGTTGTCGCTGTTGTCC
CGCACGCAGGGATTCCTGGCCCACTGGAAAGAAGCCATGTGTAAGTGACC
CATTTTGCCACTGGGTGTCCCACTCTGAGACTAACGATGTGACAGCGAGC
ACGGCACGTATCTGGCGGCCCGGCCAGATCTACACCGGACACTTGAACCG
CGAGATGGCGTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:3081043..3082655+

>ASPNIDRAFT_176409-T1 ID=ASPNIDRAFT_176409-T1|Name=ASPNIDRAFT_176409-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=6885bp|location=Sequence derived from alignment at ACJE01000021.1:3081043..3082655+ (Aspergillus niger ATCC 1015)
ATGCCCGACATCGCATCCAACGGTGCCCGCAACGGCGCCTCCCAGAATGC
AGAGACCAAGCCAGAACCCCCCGTTCTCCATGTGGTAGACAGCCGCACGG
GGAAGTACTTCCCCATCCCTATCGTGCGCAACGCCATCAACGCGAGCGAA
TTCAAGAAACTCAAGTCCCCCGAGGATCCCGCACATCCTGAAGATCAGAA
CGAGCAGGGCATCCGGGTGTTTGACCCCGGATACTCCAACACGGCTGTTA
GTGAGAGCCAGGTTACCTACATCGATGGCCTGAAGGGAACCATCCAGTAC
CGTGGTTACAACATCGAGGATATTGTGGGCAAGAAGAAGTTTATCGACAC
GGCACACCTGCTCATTTGGGGAGAATGGCCGACGCCGGAACAGGCCAAGT
CTCTGCAGGAGAAGCTCTCCAGCGTACCTGTCCTGGATGAATCCGTCTTC
AAAGTCATTCAGGCATTCCCTCCCAACTCGTCCATCATCGGCATGATGAT
CGCCGCTCTGTCAGCTGTCCAGAGTACCCAGATGGATCGCATCCCCGCCC
ATGCGGCCAAGAACCTCTACTTGGGCAATCCCAAGGCCGTCGATGATGAG
ATCGTCCGTCTGATGGGCTCGCTGTCCATGATCACCGCTGCTGTCTACTG
CCACCATACCGGACGGGAATTTACCCCGCCACGTCCGGAACTCTCCTACA
TCGAGAACTTCCTGTTGATGATGGGCCACGTCGAGTCTAGCACAGGACTG
CCAAACCCCCAGTACGTCGACCGCATTGAGCGTCTCTGGGTCCTCATTGC
CGATCACGAGATGACCTGCTCGACTGCTGCGTTCTTGCAGACGGCCTCCT
CCCTGCCGGATGTATTCTCCTGTATGATCTCCGCACTTTCGGCGCTCTAT
GGTCCGCTGCATGGTGGGGCCATTGAGGTAGCTTACAAAAATTTCGAGGA
GATTGGCTCGGTTGAGAACGTCGCGGCCAAGATAGAACGTGTCAAGGCCG
GTAAGGAGCGTCTGTACGGCTACGGTCACCGCATCTACCGCGTCACAGAC
CCGCGCTTCATCTTCATCCGCCAGATCTTAGACGAGTTGAAGGAAGAGAT
CGCCCGGAACCCGCTGCTGAAGGTGGCGTTTGAGGTGGACCGCGTCGCCT
CGGAGGATGAATACTTTGTCACCCGAAAGCTACGGCCCAACGCCGATCTC
TTTGCGGCGCTTGTGTATAGTGCCATGGGCTTCCCGACTGAGTTTATTCT
ACCGTTGTCGCTGTTGTCCCGCACGCAGGGATTCCTGGCCCACTGGAAAG
AAGCCATGTCGAGCACGGCACGTATCTGGCGGCCCGGCCAGATCTACACC
GGACACTTGAACCGCGAGATGGCGTAGATGCCCGACATCGCATCCAACGG
TGCCCGCAACGGCGCCTCCCAGAATGCAGAGACCAAGCCAGAACCCCCCG
TTCTCCATGTGGTAGACAGCCGCACGGGGAAGTACTTCCCCATCCCTATC
GTGCGCAACGCCATCAACGCGAGCGAATTCAAGAAACTCAAGTCCCCCGA
GGATCCCGCACATCCTGAAGATCAGAACGAGCAGGGCATCCGGGTGTTTG
ACCCCGGATACTCCAACACGGCTGTTAGTGAGAGCCAGGTTACCTACATC
GATGGCCTGAAGGGAACCATCCAGTACCGTGGTTACAACATCGAGGATAT
TGTGGGCAAGAAGAAGTTTATCGACACGGCACACCTGCTCATTTGGGGAG
AATGGCCGACGCCGGAACAGGCCAAGTCTCTGCAGGAGAAGCTCTCCAGC
GTACCTGTCCTGGATGAATCCGTCTTCAAAGTCATTCAGGCATTCCCTCC
CAACTCGTCCATCATCGGCATGATGATCGCCGCTCTGTCAGCTGTCCAGA
GTACCCAGATGGATCGCATCCCCGCCCATGCGGCCAAGAACCTCTACTTG
GGCAATCCCAAGGCCGTCGATGATGAGATCGTCCGTCTGATGGGCTCGCT
GTCCATGATCACCGCTGCTGTCTACTGCCACCATACCGGACGGGAATTTA
CCCCGCCACGTCCGGAACTCTCCTACATCGAGAACTTCCTGTTGATGATG
GGCCACGTCGAGTCTAGCACAGGACTGCCAAACCCCCAGTACGTCGACCG
CATTGAGCGTCTCTGGGTCCTCATTGCCGATCACGAGATGACCTGCTCGA
CTGCTGCGTTCTTGCAGACGGCCTCCTCCCTGCCGGATGTATTCTCCTGT
ATGATCTCCGCACTTTCGGCGCTCTATGGTCCGCTGCATGGTGGGGCCAT
TGAGGTAGCTTACAAAAATTTCGAGGAGATTGGCTCGGTTGAGAACGTCG
CGGCCAAGATAGAACGTGTCAAGGCCGGTAAGGAGCGTCTGTACGGCTAC
GGTCACCGCATCTACCGCGTCACAGACCCGCGCTTCATCTTCATCCGCCA
GATCTTAGACGAGTTGAAGGAAGAGATCGCCCGGAACCCGCTGCTGAAGG
TGGCGTTTGAGGTGGACCGCGTCGCCTCGGAGGATGAATACTTTGTCACC
CGAAAGCTACGGCCCAACGCCGATCTCTTTGCGGCGCTTGTGTATAGTGC
CATGGGCTTCCCGACTGAGTTTATTCTACCGTTGTCGCTGTTGTCCCGCA
CGCAGGGATTCCTGGCCCACTGGAAAGAAGCCATGTCGAGCACGGCACGT
ATCTGGCGGCCCGGCCAGATCTACACCGGACACTTGAACCGCGAGATGGC
GTAGATGCCCGACATCGCATCCAACGGTGCCCGCAACGGCGCCTCCCAGA
ATGCAGAGACCAAGCCAGAACCCCCCGTTCTCCATGTGGTAGACAGCCGC
ACGGGGAAGTACTTCCCCATCCCTATCGTGCGCAACGCCATCAACGCGAG
CGAATTCAAGAAACTCAAGTCCCCCGAGGATCCCGCACATCCTGAAGATC
AGAACGAGCAGGGCATCCGGGTGTTTGACCCCGGATACTCCAACACGGCT
GTTAGTGAGAGCCAGGTTACCTACATCGATGGCCTGAAGGGAACCATCCA
GTACCGTGGTTACAACATCGAGGATATTGTGGGCAAGAAGAAGTTTATCG
ACACGGCACACCTGCTCATTTGGGGAGAATGGCCGACGCCGGAACAGGCC
AAGTCTCTGCAGGAGAAGCTCTCCAGCGTACCTGTCCTGGATGAATCCGT
CTTCAAAGTCATTCAGGCATTCCCTCCCAACTCGTCCATCATCGGCATGA
TGATCGCCGCTCTGTCAGCTGTCCAGAGTACCCAGATGGATCGCATCCCC
GCCCATGCGGCCAAGAACCTCTACTTGGGCAATCCCAAGGCCGTCGATGA
TGAGATCGTCCGTCTGATGGGCTCGCTGTCCATGATCACCGCTGCTGTCT
ACTGCCACCATACCGGACGGGAATTTACCCCGCCACGTCCGGAACTCTCC
TACATCGAGAACTTCCTGTTGATGATGGGCCACGTCGAGTCTAGCACAGG
ACTGCCAAACCCCCAGTACGTCGACCGCATTGAGCGTCTCTGGGTCCTCA
TTGCCGATCACGAGATGACCTGCTCGACTGCTGCGTTCTTGCAGACGGCC
TCCTCCCTGCCGGATGTATTCTCCTGTATGATCTCCGCACTTTCGGCGCT
CTATGGTCCGCTGCATGGTGGGGCCATTGAGGTAGCTTACAAAAATTTCG
AGGAGATTGGCTCGGTTGAGAACGTCGCGGCCAAGATAGAACGTGTCAAG
GCCGGTAAGGAGCGTCTGTACGGCTACGGTCACCGCATCTACCGCGTCAC
AGACCCGCGCTTCATCTTCATCCGCCAGATCTTAGACGAGTTGAAGGAAG
AGATCGCCCGGAACCCGCTGCTGAAGGTGGCGTTTGAGGTGGACCGCGTC
GCCTCGGAGGATGAATACTTTGTCACCCGAAAGCTACGGCCCAACGCCGA
TCTCTTTGCGGCGCTTGTGTATAGTGCCATGGGCTTCCCGACTGAGTTTA
TTCTACCGTTGTCGCTGTTGTCCCGCACGCAGGGATTCCTGGCCCACTGG
AAAGAAGCCATGTCGAGCACGGCACGTATCTGGCGGCCCGGCCAGATCTA
CACCGGACACTTGAACCGCGAGATGGCGTAGATGCCCGACATCGCATCCA
ACGGTGCCCGCAACGGCGCCTCCCAGAATGCAGAGACCAAGCCAGAACCC
CCCGTTCTCCATGTGGTAGACAGCCGCACGGGGAAGTACTTCCCCATCCC
TATCGTGCGCAACGCCATCAACGCGAGCGAATTCAAGAAACTCAAGTCCC
CCGAGGATCCCGCACATCCTGAAGATCAGAACGAGCAGGGCATCCGGGTG
TTTGACCCCGGATACTCCAACACGGCTGTTAGTGAGAGCCAGGTTACCTA
CATCGATGGCCTGAAGGGAACCATCCAGTACCGTGGTTACAACATCGAGG
ATATTGTGGGCAAGAAGAAGTTTATCGACACGGCACACCTGCTCATTTGG
GGAGAATGGCCGACGCCGGAACAGGCCAAGTCTCTGCAGGAGAAGCTCTC
CAGCGTACCTGTCCTGGATGAATCCGTCTTCAAAGTCATTCAGGCATTCC
CTCCCAACTCGTCCATCATCGGCATGATGATCGCCGCTCTGTCAGCTGTC
CAGAGTACCCAGATGGATCGCATCCCCGCCCATGCGGCCAAGAACCTCTA
CTTGGGCAATCCCAAGGCCGTCGATGATGAGATCGTCCGTCTGATGGGCT
CGCTGTCCATGATCACCGCTGCTGTCTACTGCCACCATACCGGACGGGAA
TTTACCCCGCCACGTCCGGAACTCTCCTACATCGAGAACTTCCTGTTGAT
GATGGGCCACGTCGAGTCTAGCACAGGACTGCCAAACCCCCAGTACGTCG
ACCGCATTGAGCGTCTCTGGGTCCTCATTGCCGATCACGAGATGACCTGC
TCGACTGCTGCGTTCTTGCAGACGGCCTCCTCCCTGCCGGATGTATTCTC
CTGTATGATCTCCGCACTTTCGGCGCTCTATGGTCCGCTGCATGGTGGGG
CCATTGAGGTAGCTTACAAAAATTTCGAGGAGATTGGCTCGGTTGAGAAC
GTCGCGGCCAAGATAGAACGTGTCAAGGCCGGTAAGGAGCGTCTGTACGG
CTACGGTCACCGCATCTACCGCGTCACAGACCCGCGCTTCATCTTCATCC
GCCAGATCTTAGACGAGTTGAAGGAAGAGATCGCCCGGAACCCGCTGCTG
AAGGTGGCGTTTGAGGTGGACCGCGTCGCCTCGGAGGATGAATACTTTGT
CACCCGAAAGCTACGGCCCAACGCCGATCTCTTTGCGGCGCTTGTGTATA
GTGCCATGGGCTTCCCGACTGAGTTTATTCTACCGTTGTCGCTGTTGTCC
CGCACGCAGGGATTCCTGGCCCACTGGAAAGAAGCCATGTCGAGCACGGC
ACGTATCTGGCGGCCCGGCCAGATCTACACCGGACACTTGAACCGCGAGA
TGGCGTAGATGCCCGACATCGCATCCAACGGTGCCCGCAACGGCGCCTCC
CAGAATGCAGAGACCAAGCCAGAACCCCCCGTTCTCCATGTGGTAGACAG
CCGCACGGGGAAGTACTTCCCCATCCCTATCGTGCGCAACGCCATCAACG
CGAGCGAATTCAAGAAACTCAAGTCCCCCGAGGATCCCGCACATCCTGAA
GATCAGAACGAGCAGGGCATCCGGGTGTTTGACCCCGGATACTCCAACAC
GGCTGTTAGTGAGAGCCAGGTTACCTACATCGATGGCCTGAAGGGAACCA
TCCAGTACCGTGGTTACAACATCGAGGATATTGTGGGCAAGAAGAAGTTT
ATCGACACGGCACACCTGCTCATTTGGGGAGAATGGCCGACGCCGGAACA
GGCCAAGTCTCTGCAGGAGAAGCTCTCCAGCGTACCTGTCCTGGATGAAT
CCGTCTTCAAAGTCATTCAGGCATTCCCTCCCAACTCGTCCATCATCGGC
ATGATGATCGCCGCTCTGTCAGCTGTCCAGAGTACCCAGATGGATCGCAT
CCCCGCCCATGCGGCCAAGAACCTCTACTTGGGCAATCCCAAGGCCGTCG
ATGATGAGATCGTCCGTCTGATGGGCTCGCTGTCCATGATCACCGCTGCT
GTCTACTGCCACCATACCGGACGGGAATTTACCCCGCCACGTCCGGAACT
CTCCTACATCGAGAACTTCCTGTTGATGATGGGCCACGTCGAGTCTAGCA
CAGGACTGCCAAACCCCCAGTACGTCGACCGCATTGAGCGTCTCTGGGTC
CTCATTGCCGATCACGAGATGACCTGCTCGACTGCTGCGTTCTTGCAGAC
GGCCTCCTCCCTGCCGGATGTATTCTCCTGTATGATCTCCGCACTTTCGG
CGCTCTATGGTCCGCTGCATGGTGGGGCCATTGAGGTAGCTTACAAAAAT
TTCGAGGAGATTGGCTCGGTTGAGAACGTCGCGGCCAAGATAGAACGTGT
CAAGGCCGGTAAGGAGCGTCTGTACGGCTACGGTCACCGCATCTACCGCG
TCACAGACCCGCGCTTCATCTTCATCCGCCAGATCTTAGACGAGTTGAAG
GAAGAGATCGCCCGGAACCCGCTGCTGAAGGTGGCGTTTGAGGTGGACCG
CGTCGCCTCGGAGGATGAATACTTTGTCACCCGAAAGCTACGGCCCAACG
CCGATCTCTTTGCGGCGCTTGTGTATAGTGCCATGGGCTTCCCGACTGAG
TTTATTCTACCGTTGTCGCTGTTGTCCCGCACGCAGGGATTCCTGGCCCA
CTGGAAAGAAGCCATGTCGAGCACGGCACGTATCTGGCGGCCCGGCCAGA
TCTACACCGGACACTTGAACCGCGAGATGGCGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
Vocabulary: Molecular Function
TermDefinition
GO:0046912transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_176409ASPNIDRAFT_176409Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_176409-T1ASPNIDRAFT_176409-T1-proteinAspergillus niger ATCC 1015polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_176409-T1.exon1ASPNIDRAFT_176409-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_176409-T1.exon2ASPNIDRAFT_176409-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_176409-T1.exon3ASPNIDRAFT_176409-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_176409-T1.exon4ASPNIDRAFT_176409-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_176409-T1.exon5ASPNIDRAFT_176409-T1.exon5Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_176409-T1.cdsASPNIDRAFT_176409-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
DBxrefInterPro:IPR036969
DBxrefInterPro:IPR019810
DBxrefInterPro:IPR024176
DBxrefInterPro:IPR016143
DBxrefInterPro:IPR016142
DBxrefInterPro:IPR002020
DBxrefPFAM:PF00285
Productcitrate synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:3081043..3082655 +
Powered by Drupal