You are here

Home

ASPNIDRAFT_177856-T1, ASPNIDRAFT_177856-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_177856-T1
Unique NameASPNIDRAFT_177856-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:1955031..1956692+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_177856-T1 ID=ASPNIDRAFT_177856-T1|Name=ASPNIDRAFT_177856-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1662bp|location=Sequence derived from alignment at ACJE01000021.1:1955031..1956692+ (Aspergillus niger ATCC 1015)
ATGTCATCGCAAAGTGCAGAGGACAGCACCCGTTTAGAGCAAGTCTTAGA
TGGGTCGACTCCATACGACTCCGAGTCCACCCTCAGTCGCGGCGACTTGC
AGGAAAAGCCATCCGAACTCGACGATGAGGACCCCGAGGCCCTGACTCGG
CTCGAGACGGCCCAGTCAGCCGTTAAGCCCCCCTCCGAACTATGGAAAGA
GATCATCTTCATCGCCGTCGTCTGCATGGCTCAATTCATGACCCAAGCCG
GTCTATGCATGTCCATTGCCCCGGCTCACATCATCGGTGCCAGCTTTGGC
ACCACCAATGCAGGCCAGCTCAGTTGGTTTGCTGCAGCCTACAGCTTAAC
TGTCGGGACCTTCATCCTGGTTGCTGGTCGGCTCGGGGACGTCTACGGCC
ATCGGCTCATGTTTATCATCGGCTTCTCCTGGTTCGGTCTCTGGTCTCTC
CTGGCCGGCTTCAGCGTCTGGTCGAATAAGGTCTTTTTCGACTGCTGTCG
AGCATTGCAGGGAATTGGTCCCGCCATGTTATTGCCGAACGCCATTGCCA
TTCTGGGACGAGCCTATCCTCCCGGTCTGCGCAAGGAGATGATCTTTAGC
TGTTTCGGAGCTACAGCCCCGGGCGGGTTCATCGTCGGAGGTGTCTTCTC
CTCCCTCTTTGCTCAGCTCGTTTGGTGGCCGTGGGCATACTGGGTTATGG
GCATGGTGTGCTTTGTACTGGCAGCGCTCGGTATTCTTGTGATTCCGGTT
ACCCGTCGCCCGAAGTTCACAGACGACATGACGGCCTGGACGCGACTAGA
TATTCTCGGTGCCATCACCGGTATCTCGGCCCTGGTCCTGATCAACTTTG
CCTGGAACCAGGCTGCCCTTGTGGGATGGCAGACACCCTACACCTATGCC
CTTCTAATTGTCGGATTCGTCTTCTTTGGTGTCTTCATTTTTGTTGAACG
CTCGGCCCCGTGCCCCTTGATCCCACGATCAGTCCTCTCCGGTGACCTGG
CCTGGGTGCTCGGGTGCATTGCGGCGGGTTGGTCCAGCTTCGGAATTATC
ATCTACTACTTCTATCAATTCATGGAAGTTATCAAGGGTGACTCCCCACT
ACTCGCGACCGCTAAATGGTCCGCCGCTGCGCCGTCCGGCGCCGTTGCTG
CACTGGTTACCGGTTTCCTGCTGGGAAAGCTACCACCTAGCGTGATCATG
TTTTTCGCCATGTGCTTCTTCACTGCTGGACAAGCCATCTTCGCCACTGC
CCCTGTGCATCAGACGTACTGGGCGCAGGCGTTTGTCGTTAGTCTGATCA
CGTCGTGGGGAATGTACGTACCGAGTCCAATAACCCCTTCATTTTCGTTA
CATATATTAACCGACAATAGGGACATGTCCTTCCCATCAGGAACACTTAT
TCTGAGTAACTCGATGCACCATCACCACCAGGGTCTGGCAGCGTCGCTTG
TCACGACAACAGTCAATTATTCTATCTCGCTGGGACTGGGATTCGCCGGT
ACTGTAGAGTCGAACGTCAACGATGGCGGGAAGAATCCCCTGAAGGGATA
CCGCGGGGCGCTTTATCTTGGCATAGGCCTTGCTGGGTTAGGAATGGTCA
CCTCTATTTGCTTCATGTCGGTTAGCTGGAGACGTCATCGTCTGGGGAAA
GAGTCGACGTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:1955031..1956692+

>ASPNIDRAFT_177856-T1 ID=ASPNIDRAFT_177856-T1|Name=ASPNIDRAFT_177856-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3210bp|location=Sequence derived from alignment at ACJE01000021.1:1955031..1956692+ (Aspergillus niger ATCC 1015)
ATGTCATCGCAAAGTGCAGAGGACAGCACCCGTTTAGAGCAAGTCTTAGA
TGGGTCGACTCCATACGACTCCGAGTCCACCCTCAGTCGCGGCGACTTGC
AGGAAAAGCCATCCGAACTCGACGATGAGGACCCCGAGGCCCTGACTCGG
CTCGAGACGGCCCAGTCAGCCGTTAAGCCCCCCTCCGAACTATGGAAAGA
GATCATCTTCATCGCCGTCGTCTGCATGGCTCAATTCATGACCCAAGCCG
GTCTATGCATGTCCATTGCCCCGGCTCACATCATCGGTGCCAGCTTTGGC
ACCACCAATGCAGGCCAGCTCAGTTGGTTTGCTGCAGCCTACAGCTTAAC
TGTCGGGACCTTCATCCTGGTTGCTGGTCGGCTCGGGGACGTCTACGGCC
ATCGGCTCATGTTTATCATCGGCTTCTCCTGGTTCGGTCTCTGGTCTCTC
CTGGCCGGCTTCAGCGTCTGGTCGAATAAGGTCTTTTTCGACTGCTGTCG
AGCATTGCAGGGAATTGGTCCCGCCATGTTATTGCCGAACGCCATTGCCA
TTCTGGGACGAGCCTATCCTCCCGGTCTGCGCAAGGAGATGATCTTTAGC
TGTTTCGGAGCTACAGCCCCGGGCGGGTTCATCGTCGGAGGTGTCTTCTC
CTCCCTCTTTGCTCAGCTCGTTTGGTGGCCGTGGGCATACTGGGTTATGG
GCATGGTGTGCTTTGTACTGGCAGCGCTCGGTATTCTTGTGATTCCGGTT
ACCCGTCGCCCGAAGTTCACAGACGACATGACGGCCTGGACGCGACTAGA
TATTCTCGGTGCCATCACCGGTATCTCGGCCCTGGTCCTGATCAACTTTG
CCTGGAACCAGGCTGCCCTTGTGGGATGGCAGACACCCTACACCTATGCC
CTTCTAATTGTCGGATTCGTCTTCTTTGGTGTCTTCATTTTTGTTGAACG
CTCGGCCCCGTGCCCCTTGATCCCACGATCAGTCCTCTCCGGTGACCTGG
CCTGGGTGCTCGGGTGCATTGCGGCGGGTTGGTCCAGCTTCGGAATTATC
ATCTACTACTTCTATCAATTCATGGAAGTTATCAAGGGTGACTCCCCACT
ACTCGCGACCGCTAAATGGTCCGCCGCTGCGCCGTCCGGCGCCGTTGCTG
CACTGGTTACCGGTTTCCTGCTGGGAAAGCTACCACCTAGCGTGATCATG
TTTTTCGCCATGTGCTTCTTCACTGCTGGACAAGCCATCTTCGCCACTGC
CCCTGTGCATCAGACGTACTGGGCGCAGGCGTTTGTCGTTAGTCTGATCA
CGTCGTGGGGAATGGACATGTCCTTCCCATCAGGAACACTTATTCTGAGT
AACTCGATGCACCATCACCACCAGGGTCTGGCAGCGTCGCTTGTCACGAC
AACAGTCAATTATTCTATCTCGCTGGGACTGGGATTCGCCGGTACTGTAG
AGTCGAACGTCAACGATGGCGGGAAGAATCCCCTGAAGGGATACCGCGGG
GCGCTTTATCTTGGCATAGGCCTTGCTGGGTTAGGAATGGTCACCTCTAT
TTGCTTCATGTCGGTTAGCTGGAGACGTCATCGTCTGGGGAAAGAGTCGA
CGTGAATGTCATCGCAAAGTGCAGAGGACAGCACCCGTTTAGAGCAAGTC
TTAGATGGGTCGACTCCATACGACTCCGAGTCCACCCTCAGTCGCGGCGA
CTTGCAGGAAAAGCCATCCGAACTCGACGATGAGGACCCCGAGGCCCTGA
CTCGGCTCGAGACGGCCCAGTCAGCCGTTAAGCCCCCCTCCGAACTATGG
AAAGAGATCATCTTCATCGCCGTCGTCTGCATGGCTCAATTCATGACCCA
AGCCGGTCTATGCATGTCCATTGCCCCGGCTCACATCATCGGTGCCAGCT
TTGGCACCACCAATGCAGGCCAGCTCAGTTGGTTTGCTGCAGCCTACAGC
TTAACTGTCGGGACCTTCATCCTGGTTGCTGGTCGGCTCGGGGACGTCTA
CGGCCATCGGCTCATGTTTATCATCGGCTTCTCCTGGTTCGGTCTCTGGT
CTCTCCTGGCCGGCTTCAGCGTCTGGTCGAATAAGGTCTTTTTCGACTGC
TGTCGAGCATTGCAGGGAATTGGTCCCGCCATGTTATTGCCGAACGCCAT
TGCCATTCTGGGACGAGCCTATCCTCCCGGTCTGCGCAAGGAGATGATCT
TTAGCTGTTTCGGAGCTACAGCCCCGGGCGGGTTCATCGTCGGAGGTGTC
TTCTCCTCCCTCTTTGCTCAGCTCGTTTGGTGGCCGTGGGCATACTGGGT
TATGGGCATGGTGTGCTTTGTACTGGCAGCGCTCGGTATTCTTGTGATTC
CGGTTACCCGTCGCCCGAAGTTCACAGACGACATGACGGCCTGGACGCGA
CTAGATATTCTCGGTGCCATCACCGGTATCTCGGCCCTGGTCCTGATCAA
CTTTGCCTGGAACCAGGCTGCCCTTGTGGGATGGCAGACACCCTACACCT
ATGCCCTTCTAATTGTCGGATTCGTCTTCTTTGGTGTCTTCATTTTTGTT
GAACGCTCGGCCCCGTGCCCCTTGATCCCACGATCAGTCCTCTCCGGTGA
CCTGGCCTGGGTGCTCGGGTGCATTGCGGCGGGTTGGTCCAGCTTCGGAA
TTATCATCTACTACTTCTATCAATTCATGGAAGTTATCAAGGGTGACTCC
CCACTACTCGCGACCGCTAAATGGTCCGCCGCTGCGCCGTCCGGCGCCGT
TGCTGCACTGGTTACCGGTTTCCTGCTGGGAAAGCTACCACCTAGCGTGA
TCATGTTTTTCGCCATGTGCTTCTTCACTGCTGGACAAGCCATCTTCGCC
ACTGCCCCTGTGCATCAGACGTACTGGGCGCAGGCGTTTGTCGTTAGTCT
GATCACGTCGTGGGGAATGGACATGTCCTTCCCATCAGGAACACTTATTC
TGAGTAACTCGATGCACCATCACCACCAGGGTCTGGCAGCGTCGCTTGTC
ACGACAACAGTCAATTATTCTATCTCGCTGGGACTGGGATTCGCCGGTAC
TGTAGAGTCGAACGTCAACGATGGCGGGAAGAATCCCCTGAAGGGATACC
GCGGGGCGCTTTATCTTGGCATAGGCCTTGCTGGGTTAGGAATGGTCACC
TCTATTTGCTTCATGTCGGTTAGCTGGAGACGTCATCGTCTGGGGAAAGA
GTCGACGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_177856ASPNIDRAFT_177856Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_177856-T1.exon1ASPNIDRAFT_177856-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_177856-T1.exon2ASPNIDRAFT_177856-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_177856-T1.cdsASPNIDRAFT_177856-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_177856-T1ASPNIDRAFT_177856-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:1955031..1956692 +
Powered by Drupal