You are here

Home

ASPNIDRAFT_178591-T1, ASPNIDRAFT_178591-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_178591-T1
Unique NameASPNIDRAFT_178591-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:2460590..2461362+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_178591-T1 ID=ASPNIDRAFT_178591-T1|Name=ASPNIDRAFT_178591-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=773bp|location=Sequence derived from alignment at ACJE01000019.1:2460590..2461362+ (Aspergillus niger ATCC 1015)
ATGGAGGCAGCAGATCTACTTCCGCTGCTCGAGCAGCTGGATGACAACAT
CGACGATCTTGAAGAGGCTTTGAAGCCCATCCTGGACAGCTCTGTGGTGG
AGACGTCGAAGAAGCTTCCAGTGATGGATAAAGCGAAATTTCACGTCTTG
GTGACTTATGCGTTGGAGTCTCTTATCTTCTGTATGTCACTATTGCAGTT
GAAAGAAAATCAATTGCTAATTATCTACAGCATATCTGCGTCTTCATGGC
GTTAATGCTAAGGAACACTCCGTGTTTAGAGAATTAACTAGAGTCAAGCA
ATACTTTGCGAAGATCACCGCGCTCGAAGCGGAGCCGGAAAAGCGTACTC
TAACTCTTGACAAGCAGGCTGCCAGTCGCTTCATTAAACATGGTCTTGTG
AGTTCCTCCTATCCTATACGGCTTCCATGGGTAAAGGCTAATTTGGTAGG
CGGGAAATGACAAAATCGACCTGGCGCGCAAGGAGCAGGAGGCAAAGGAG
AGAGCACGCGCACAGCTAAAGGCGTCAATACTGGCTAAGAAAGCAGGTGC
TACGTCTCAGCAGTCATCGCAGAATGCGACCAGCAACTCCGAGAATGAAT
CCGAGTCCGAGGAGCTTGTGAAGCCCGCTCCCAAGCCGTCAAGCAAGGGT
TCTGATGATAAGAAGAAGCGCAAGGACAAGCAGAAGAGGAGGGTCAGCAA
GGAAGAGCACAATGAGAACAAGAAGGAGCGGAGGAAGAAGAAGGATGAAT
TGCGCAAGACGAAGAAATTGAAA
back to top

Coding sequence (CDS) from alignment at ACJE01000019.1:2460590..2461362+

>ASPNIDRAFT_178591-T1 ID=ASPNIDRAFT_178591-T1|Name=ASPNIDRAFT_178591-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2007bp|location=Sequence derived from alignment at ACJE01000019.1:2460590..2461362+ (Aspergillus niger ATCC 1015)
ATGGAGGCAGCAGATCTACTTCCGCTGCTCGAGCAGCTGGATGACAACAT
CGACGATCTTGAAGAGGCTTTGAAGCCCATCCTGGACAGCTCTGTGGTGG
AGACGTCGAAGAAGCTTCCAGTGATGGATAAAGCGAAATTTCACGTCTTG
GTGACTTATGCGTTGGAGTCTCTTATCTTCTCATATCTGCGTCTTCATGG
CGTTAATGCTAAGGAACACTCCGTGTTTAGAGAATTAACTAGAGTCAAGC
AATACTTTGCGAAGATCACCGCGCTCGAAGCGGAGCCGGAAAAGCGTACT
CTAACTCTTGACAAGCAGGCTGCCAGTCGCTTCATTAAACATGGTCTTGC
GGGAAATGACAAAATCGACCTGGCGCGCAAGGAGCAGGAGGCAAAGGAGA
GAGCACGCGCACAGCTAAAGGCGTCAATACTGGCTAAGAAAGCAGGTGCT
ACGTCTCAGCAGTCATCGCAGAATGCGACCAGCAACTCCGAGAATGAATC
CGAGTCCGAGGAGCTTGTGAAGCCCGCTCCCAAGCCGTCAAGCAAGGGTT
CTGATGATAAGAAGAAGCGCAAGGACAAGCAGAAGAGGAGGGTCAGCAAG
GAAGAGCACAATGAGAACAAGAAGGAGCGGAGGAAGAAGAAGGATGAATT
GCGCAAGACGAAGAAATTGATGGAGGCAGCAGATCTACTTCCGCTGCTCG
AGCAGCTGGATGACAACATCGACGATCTTGAAGAGGCTTTGAAGCCCATC
CTGGACAGCTCTGTGGTGGAGACGTCGAAGAAGCTTCCAGTGATGGATAA
AGCGAAATTTCACGTCTTGGTGACTTATGCGTTGGAGTCTCTTATCTTCT
CATATCTGCGTCTTCATGGCGTTAATGCTAAGGAACACTCCGTGTTTAGA
GAATTAACTAGAGTCAAGCAATACTTTGCGAAGATCACCGCGCTCGAAGC
GGAGCCGGAAAAGCGTACTCTAACTCTTGACAAGCAGGCTGCCAGTCGCT
TCATTAAACATGGTCTTGCGGGAAATGACAAAATCGACCTGGCGCGCAAG
GAGCAGGAGGCAAAGGAGAGAGCACGCGCACAGCTAAAGGCGTCAATACT
GGCTAAGAAAGCAGGTGCTACGTCTCAGCAGTCATCGCAGAATGCGACCA
GCAACTCCGAGAATGAATCCGAGTCCGAGGAGCTTGTGAAGCCCGCTCCC
AAGCCGTCAAGCAAGGGTTCTGATGATAAGAAGAAGCGCAAGGACAAGCA
GAAGAGGAGGGTCAGCAAGGAAGAGCACAATGAGAACAAGAAGGAGCGGA
GGAAGAAGAAGGATGAATTGCGCAAGACGAAGAAATTGATGGAGGCAGCA
GATCTACTTCCGCTGCTCGAGCAGCTGGATGACAACATCGACGATCTTGA
AGAGGCTTTGAAGCCCATCCTGGACAGCTCTGTGGTGGAGACGTCGAAGA
AGCTTCCAGTGATGGATAAAGCGAAATTTCACGTCTTGGTGACTTATGCG
TTGGAGTCTCTTATCTTCTCATATCTGCGTCTTCATGGCGTTAATGCTAA
GGAACACTCCGTGTTTAGAGAATTAACTAGAGTCAAGCAATACTTTGCGA
AGATCACCGCGCTCGAAGCGGAGCCGGAAAAGCGTACTCTAACTCTTGAC
AAGCAGGCTGCCAGTCGCTTCATTAAACATGGTCTTGCGGGAAATGACAA
AATCGACCTGGCGCGCAAGGAGCAGGAGGCAAAGGAGAGAGCACGCGCAC
AGCTAAAGGCGTCAATACTGGCTAAGAAAGCAGGTGCTACGTCTCAGCAG
TCATCGCAGAATGCGACCAGCAACTCCGAGAATGAATCCGAGTCCGAGGA
GCTTGTGAAGCCCGCTCCCAAGCCGTCAAGCAAGGGTTCTGATGATAAGA
AGAAGCGCAAGGACAAGCAGAAGAGGAGGGTCAGCAAGGAAGAGCACAAT
GAGAACAAGAAGGAGCGGAGGAAGAAGAAGGATGAATTGCGCAAGACGAA
GAAATTG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_178591ASPNIDRAFT_178591Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_178591-T1.exon1ASPNIDRAFT_178591-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_178591-T1.exon2ASPNIDRAFT_178591-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_178591-T1.exon3ASPNIDRAFT_178591-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_178591-T1.cdsASPNIDRAFT_178591-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_178591-T1.utr3p1ASPNIDRAFT_178591-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_178591-T1ASPNIDRAFT_178591-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007146
DBxrefPFAM:PF04000
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:2460590..2461362 +
Powered by Drupal