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ASPNIDRAFT_179623-T1, ASPNIDRAFT_179623-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_179623-T1
Unique NameASPNIDRAFT_179623-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:2402511..2404310-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_179623-T1 ID=ASPNIDRAFT_179623-T1|Name=ASPNIDRAFT_179623-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1800bp|location=Sequence derived from alignment at ACJE01000019.1:2402511..2404310- (Aspergillus niger ATCC 1015)
ATGCTCTCTGAATGTTTCATCGCATCGACGCTGGCGTCTAGCAAAGCGCC
AGCGTCTGCGACCCTCCGCGATGTGGGAGTTTGCGTCCATGAATTCCAGC
CCACGCTGAACCTGCGCTCCACCTTCAAGAAGAGCTCGACCGCGGCCAAT
TGCTTGGCTGTAAGCCCGTCGCATGTGTTCGCTGCGCAGTCTGAGAAAGC
CATTGTACATGTGTATAGCAGGGAGAAAGGCAACCAGGAAGCCACCGTTC
CTTTCCCGGAGCGCATTCGCAGCATTGCTGTCGCCGGGGGCAAGAACGGC
GATGTTCTGGTTTTGGGAACTGAAGGGGGACGTTTGATTCTATGGGAGGT
AAATCAATCATTCACAGCCCCAATGGCGTCGCCAGCCATTCGTCATGGTT
TCAAACTAACAGCATGTGCTTCCTAGACATGCACCGGGCGACAAGTGGCT
ACGACAGCGTCGCATCTGCGGCCAGTGACCTCGCTCGTGGTCGATCCCAA
TTCCAACTTCATTCTGTCGGGCTCATCCGATGCCAGCATTCATGTTTGGT
CGTTAGTGGATCTCTTATCCTTTACGAAACCTCCATCCGGCCGTGATCGT
CAGCCTCCGAACTCCCCCATCCGTACCTTCTCCAACCACCGCGCCGCCAT
CACCGCCATCGCTGTGGGTCACAGCGCGGGTCGATACAACATTGCTCTGT
CTGCTGCAGATGATAGCACAGCCATTGCCTGGGATTATCACACCGGCCGT
CTCCTGCGCACCTTCCTCTTGCCTTCCAATGCGAAGTCGCTGGCCCTTGA
CCCGGCCGACCGGGCCTTCTATGTCGGCTACGAAGATGGCAGTATCCAGT
CGATCGACTTCTACAAGAACCAGTCCATCCAAAACCCTCTCCACGACCCC
TCCCTTCAATCAACTCCCTCGCAGCCACCCGCAGAGGATCGCTGGGCACC
GCCATCGGCCGATTGCGGCGCAGCGCATGCGCTCACTCTCTGCTACGATG
GAATGACGTTGCTCTCTGGCCATCAGAATGGCAAGGTTCTGTCATGGACA
GTTGGAAGGAAGAAGTACGCCTCGACCGTGGCAGACTACACACACCCTGT
CACGAACCTGTTTATGCTTCCTCCCAACGGTCTTCCTCATCCTTCCCTCG
ACCTCAAGCGGGTAGCACACACCATCGTCAAGCCCCGCTACGACTCTTCC
CTGTCCGAAACCTCCCAAGCAGCCGGCGCCGTTCCAGCCGATTACACCTT
CAGCACGCACCTCCTCCCCTCGATCTCATCCAAGCCCGACTCTGCTAAGC
CCGACCAATTCACCGAAGCCTTCTCCCACGCGTACTTCCCCGAATCCATG
CTCGAAGAAGGTCTCGCCGAATTAGCTGCCTTCAGCCAGCCCACTAGCAA
CGGAGCTCCAGTCTCCTCGATAGCACAGGGCATCAGCGACGAAGACTTAG
CAGCCAAGGATTCCCAAATATCCCAACTGGGGGAGGAACTCGCCACGCTG
AAGAAGAAGTCATCCGTCAATGAGACCGCCCGCCAATCCACAACAGACGA
AGTGACCAAACTTCGCTCGGACCTCGCCAACCTACACGACTATATCAATG
AGCTTCACGAGAAACAAGAACAGGCGCAGCGGGAGAAGATTCTCCGACAG
GCGCGGAAAGAAGAGCGAGAGACCCGCCGTCGGGAAGCTTGGTTTGCAGC
CGAAAAGAAGGGCAAGAAGGGAGATGCGGTTCTCCGTAAGATGGACGCCG
AGGATACCGTCATGACGAGTGATACGGATGATCAGAGCAGTGATGAGTAG
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Coding sequence (CDS) from alignment at ACJE01000019.1:2402511..2404310-

>ASPNIDRAFT_179623-T1 ID=ASPNIDRAFT_179623-T1|Name=ASPNIDRAFT_179623-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3444bp|location=Sequence derived from alignment at ACJE01000019.1:2402511..2404310- (Aspergillus niger ATCC 1015)
ACATGCACCGGGCGACAAGTGGCTACGACAGCGTCGCATCTGCGGCCAGT
GACCTCGCTCGTGGTCGATCCCAATTCCAACTTCATTCTGTCGGGCTCAT
CCGATGCCAGCATTCATGTTTGGTCGTTAGTGGATCTCTTATCCTTTACG
AAACCTCCATCCGGCCGTGATCGTCAGCCTCCGAACTCCCCCATCCGTAC
CTTCTCCAACCACCGCGCCGCCATCACCGCCATCGCTGTGGGTCACAGCG
CGGGTCGATACAACATTGCTCTGTCTGCTGCAGATGATAGCACAGCCATT
GCCTGGGATTATCACACCGGCCGTCTCCTGCGCACCTTCCTCTTGCCTTC
CAATGCGAAGTCGCTGGCCCTTGACCCGGCCGACCGGGCCTTCTATGTCG
GCTACGAAGATGGCAGTATCCAGTCGATCGACTTCTACAAGAACCAGTCC
ATCCAAAACCCTCTCCACGACCCCTCCCTTCAATCAACTCCCTCGCAGCC
ACCCGCAGAGGATCGCTGGGCACCGCCATCGGCCGATTGCGGCGCAGCGC
ATGCGCTCACTCTCTGCTACGATGGAATGACGTTGCTCTCTGGCCATCAG
AATGGCAAGGTTCTGTCATGGACAGTTGGAAGGAAGAAGTACGCCTCGAC
CGTGGCAGACTACACACACCCTGTCACGAACCTGTTTATGCTTCCTCCCA
ACGGTCTTCCTCATCCTTCCCTCGACCTCAAGCGGGTAGCACACACCATC
GTCAAGCCCCGCTACGACTCTTCCCTGTCCGAAACCTCCCAAGCAGCCGG
CGCCGTTCCAGCCGATTACACCTTCAGCACGCACCTCCTCCCCTCGATCT
CATCCAAGCCCGACTCTGCTAAGCCCGACCAATTCACCGAAGCCTTCTCC
CACGCGTACTTCCCCGAATCCATGCTCGAAGAAGGTCTCGCCGAATTAGC
TGCCTTCAGCCAGCCCACTAGCAACGGAGCTCCAGTCTCCTCGATAGCAC
AGGGCATCAGCGACGAAGACTTAGCAGCCAAGGATTCCCAAATATCCCAA
CTGGGGGAGGAACTCGCCACGCTGAAGAAGAAGTCATCCGTCAATGAGAC
CGCCCGCCAATCCACAACAGACGAAGTGACCAAACTTCGCTCGGACCTCG
CCAACCTACACGACTATATCAATGAGCTTCACGAGAAACAAGAACAGGCG
CAGCGGGAGAAGATTCTCCGACAGGCGCGGAAAGAAGAGCGAGAGACCCG
CCGTCGGGAAGCTTGGTTTGCAGCCGAAAAGAAGGGCAAGAAGGGAGATG
CGGTTCTCCGTAAGATGGACGCCGAGGATACCGTCATGACGAGTGATACG
GATGATCAGAGCAGTGATGAGTAGATGCTCTCTGAATGTTTCATCGCATC
GACGCTGGCGTCTAGCAAAGCGCCAGCGTCTGCGACCCTCCGCGATGTGG
GAGTTTGCGTCCATGAATTCCAGCCCACGCTGAACCTGCGCTCCACCTTC
AAGAAGAGCTCGACCGCGGCCAATTGCTTGGCTGTAAGCCCGTCGCATGT
GTTCGCTGCGCAGTCTGAGAAAGCCATTGTACATGTGTATAGCAGGGAGA
AAGGCAACCAGGAAGCCACCGTTCCTTTCCCGGAGCGCATTCGCAGCATT
GCTGTCGCCGGGGGCAAGAACGGCGATGTTCTGGTTTTGGGAACTGAAGG
GGGACGTTTGATTCTATGGGAGACATGCACCGGGCGACAAGTGGCTACGA
CAGCGTCGCATCTGCGGCCAGTGACCTCGCTCGTGGTCGATCCCAATTCC
AACTTCATTCTGTCGGGCTCATCCGATGCCAGCATTCATGTTTGGTCGTT
AGTGGATCTCTTATCCTTTACGAAACCTCCATCCGGCCGTGATCGTCAGC
CTCCGAACTCCCCCATCCGTACCTTCTCCAACCACCGCGCCGCCATCACC
GCCATCGCTGTGGGTCACAGCGCGGGTCGATACAACATTGCTCTGTCTGC
TGCAGATGATAGCACAGCCATTGCCTGGGATTATCACACCGGCCGTCTCC
TGCGCACCTTCCTCTTGCCTTCCAATGCGAAGTCGCTGGCCCTTGACCCG
GCCGACCGGGCCTTCTATGTCGGCTACGAAGATGGCAGTATCCAGTCGAT
CGACTTCTACAAGAACCAGTCCATCCAAAACCCTCTCCACGACCCCTCCC
TTCAATCAACTCCCTCGCAGCCACCCGCAGAGGATCGCTGGGCACCGCCA
TCGGCCGATTGCGGCGCAGCGCATGCGCTCACTCTCTGCTACGATGGAAT
GACGTTGCTCTCTGGCCATCAGAATGGCAAGGTTCTGTCATGGACAGTTG
GAAGGAAGAAGTACGCCTCGACCGTGGCAGACTACACACACCCTGTCACG
AACCTGTTTATGCTTCCTCCCAACGGTCTTCCTCATCCTTCCCTCGACCT
CAAGCGGGTAGCACACACCATCGTCAAGCCCCGCTACGACTCTTCCCTGT
CCGAAACCTCCCAAGCAGCCGGCGCCGTTCCAGCCGATTACACCTTCAGC
ACGCACCTCCTCCCCTCGATCTCATCCAAGCCCGACTCTGCTAAGCCCGA
CCAATTCACCGAAGCCTTCTCCCACGCGTACTTCCCCGAATCCATGCTCG
AAGAAGGTCTCGCCGAATTAGCTGCCTTCAGCCAGCCCACTAGCAACGGA
GCTCCAGTCTCCTCGATAGCACAGGGCATCAGCGACGAAGACTTAGCAGC
CAAGGATTCCCAAATATCCCAACTGGGGGAGGAACTCGCCACGCTGAAGA
AGAAGTCATCCGTCAATGAGACCGCCCGCCAATCCACAACAGACGAAGTG
ACCAAACTTCGCTCGGACCTCGCCAACCTACACGACTATATCAATGAGCT
TCACGAGAAACAAGAACAGGCGCAGCGGGAGAAGATTCTCCGACAGGCGC
GGAAAGAAGAGCGAGAGACCCGCCGTCGGGAAGCTTGGTTTGCAGCCGAA
AAGAAGGGCAAGAAGGGAGATGCGGTTCTCCGTAAGATGGACGCCGAGGA
TACCGTCATGACGAGTGATACGGATGATCAGAGCAGTGATGAGTAGATGC
TCTCTGAATGTTTCATCGCATCGACGCTGGCGTCTAGCAAAGCGCCAGCG
TCTGCGACCCTCCGCGATGTGGGAGTTTGCGTCCATGAATTCCAGCCCAC
GCTGAACCTGCGCTCCACCTTCAAGAAGAGCTCGACCGCGGCCAATTGCT
TGGCTGTAAGCCCGTCGCATGTGTTCGCTGCGCAGTCTGAGAAAGCCATT
GTACATGTGTATAGCAGGGAGAAAGGCAACCAGGAAGCCACCGTTCCTTT
CCCGGAGCGCATTCGCAGCATTGCTGTCGCCGGGGGCAAGAACGGCGATG
TTCTGGTTTTGGGAACTGAAGGGGGACGTTTGATTCTATGGGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_179623ASPNIDRAFT_179623Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_179623-T1ASPNIDRAFT_179623-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_179623-T1.cdsASPNIDRAFT_179623-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_179623-T1.exon2ASPNIDRAFT_179623-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_179623-T1.exon1ASPNIDRAFT_179623-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000191.13
NoteSMCOG1173:WD-40 repeat-containing protein
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:2402511..2404310 -
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