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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000009.1:1614411..1615460- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_180504-T1 ID=ASPNIDRAFT_180504-T1|Name=ASPNIDRAFT_180504-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1050bp|location=Sequence derived from alignment at ACJE01000009.1:1614411..1615460- (Aspergillus niger ATCC 1015)
ATGCCACGAGAATACGCCCCCGCCCACAGAAAACGCAAATCCCACGATAT
CTCCGACGATGCAGATGCTGCTGCAGCGCCCGGAGCCGGAGCAGGCCCGC
GCAAGAAAATCCTCCTCCCCAAGAAAGAACACAAATACCCGTCTGTCAAC
GAGCTCAAGAAACGTATCCGGGATGTGAAGCGTCTACTCAACAAGGCGGA
TTTGCCGGCCGATGCGCGCATCGTGCAGGAGCGCGCGTTGTCCGGGTATG
AGAAGGAATTGGAGGATGAGTTGAAGAGGAGGGATCGGTCGAAGATGATT
AAGAAGTATCATTTTGTTAGGTTTTTGGGTATGCTTTTCTTCCTCTACCC
CCGCCCTCTTTCTTACGATGTCTTGCTGTGCCGTGGGTTTTATATGGGGG
GCTGTTGCTAATTCGATACTCGATCTGTAGACCGCAAAACCGCAACCAAA
GACGTGAACCGGCTGGTGCGCCGGGAAAAGGAAGTCTCGAGTGCTGGACC
CGATGCCATGGATACCAAGACCAAGGAGAAGAAACTTGCTTCGTTGGCGG
AGAAGCTCCGAGTCGCTCGCGTGAACTTGAACTATACTATTTACTATCCA
TTGGATGAGAAGTATATCGCCTTGTACGCGGAGCAGAAGAAGAAGGTTAA
GGGAGACGGTGCGGAGGATGGTGGTGATGGCGCTGACTCGGACGGTGATG
CACGGTTTGGAATGGTGCATGCGACGGTTGCCGATAAGCCGGCGATGTGG
CATGTGGTGGAGAAGTGTATGAAGGATGGGACGTTGGATATGTTGAGGGA
TGGAAAGCTGGAGTCTGGGGCGAAGGCTGGGGAGAAGGATCGGAAGAAGG
AGGAGAGAAGTCAGAGGGCTGGTGATAAGGCGAAGAAGAGTCAAGAGCGT
GGGGTGTCGTCGTCGCAGGCTGGAAAGAGCAGGGACAGGTCCAGGAAGGT
GGATGATAGGAAGAGGTCTAGGGGCCCTGCTGAAGATCATGTCATGCGGG
ATGCAGGCAATGATGACGGCGATGAGAGTGATGGCGGTTTCTTTGAGATG
back to topCoding sequence (CDS) from alignment at ACJE01000009.1:1614411..1615460- >ASPNIDRAFT_180504-T1 ID=ASPNIDRAFT_180504-T1|Name=ASPNIDRAFT_180504-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1896bp|location=Sequence derived from alignment at ACJE01000009.1:1614411..1615460- (Aspergillus niger ATCC 1015)
ACCGCAAAACCGCAACCAAAGACGTGAACCGGCTGGTGCGCCGGGAAAAG
GAAGTCTCGAGTGCTGGACCCGATGCCATGGATACCAAGACCAAGGAGAA
GAAACTTGCTTCGTTGGCGGAGAAGCTCCGAGTCGCTCGCGTGAACTTGA
ACTATACTATTTACTATCCATTGGATGAGAAGTATATCGCCTTGTACGCG
GAGCAGAAGAAGAAGGTTAAGGGAGACGGTGCGGAGGATGGTGGTGATGG
CGCTGACTCGGACGGTGATGCACGGTTTGGAATGGTGCATGCGACGGTTG
CCGATAAGCCGGCGATGTGGCATGTGGTGGAGAAGTGTATGAAGGATGGG
ACGTTGGATATGTTGAGGGATGGAAAGCTGGAGTCTGGGGCGAAGGCTGG
GGAGAAGGATCGGAAGAAGGAGGAGAGAAGTCAGAGGGCTGGTGATAAGG
CGAAGAAGAGTCAAGAGCGTGGGGTGTCGTCGTCGCAGGCTGGAAAGAGC
AGGGACAGGTCCAGGAAGGTGGATGATAGGAAGAGGTCTAGGGGCCCTGC
TGAAGATCATGTCATGCGGGATGCAGGCAATGATGACGGCGATGAGAGTG
ATGGCGGTTTCTTTGAGATGATGCCACGAGAATACGCCCCCGCCCACAGA
AAACGCAAATCCCACGATATCTCCGACGATGCAGATGCTGCTGCAGCGCC
CGGAGCCGGAGCAGGCCCGCGCAAGAAAATCCTCCTCCCCAAGAAAGAAC
ACAAATACCCGTCTGTCAACGAGCTCAAGAAACGTATCCGGGATGTGAAG
CGTCTACTCAACAAGGCGGATTTGCCGGCCGATGCGCGCATCGTGCAGGA
GCGCGCGTTGTCCGGGTATGAGAAGGAATTGGAGGATGAGTTGAAGAGGA
GGGATCGGTCGAAGATGATTAAGAAGTATCATTTTGTTAGGTTTTTGGAC
CGCAAAACCGCAACCAAAGACGTGAACCGGCTGGTGCGCCGGGAAAAGGA
AGTCTCGAGTGCTGGACCCGATGCCATGGATACCAAGACCAAGGAGAAGA
AACTTGCTTCGTTGGCGGAGAAGCTCCGAGTCGCTCGCGTGAACTTGAAC
TATACTATTTACTATCCATTGGATGAGAAGTATATCGCCTTGTACGCGGA
GCAGAAGAAGAAGGTTAAGGGAGACGGTGCGGAGGATGGTGGTGATGGCG
CTGACTCGGACGGTGATGCACGGTTTGGAATGGTGCATGCGACGGTTGCC
GATAAGCCGGCGATGTGGCATGTGGTGGAGAAGTGTATGAAGGATGGGAC
GTTGGATATGTTGAGGGATGGAAAGCTGGAGTCTGGGGCGAAGGCTGGGG
AGAAGGATCGGAAGAAGGAGGAGAGAAGTCAGAGGGCTGGTGATAAGGCG
AAGAAGAGTCAAGAGCGTGGGGTGTCGTCGTCGCAGGCTGGAAAGAGCAG
GGACAGGTCCAGGAAGGTGGATGATAGGAAGAGGTCTAGGGGCCCTGCTG
AAGATCATGTCATGCGGGATGCAGGCAATGATGACGGCGATGAGAGTGAT
GGCGGTTTCTTTGAGATGATGCCACGAGAATACGCCCCCGCCCACAGAAA
ACGCAAATCCCACGATATCTCCGACGATGCAGATGCTGCTGCAGCGCCCG
GAGCCGGAGCAGGCCCGCGCAAGAAAATCCTCCTCCCCAAGAAAGAACAC
AAATACCCGTCTGTCAACGAGCTCAAGAAACGTATCCGGGATGTGAAGCG
TCTACTCAACAAGGCGGATTTGCCGGCCGATGCGCGCATCGTGCAGGAGC
GCGCGTTGTCCGGGTATGAGAAGGAATTGGAGGATGAGTTGAAGAGGAGG
GATCGGTCGAAGATGATTAAGAAGTATCATTTTGTTAGGTTTTTGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006364 | rRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | BUSCO:EOG09264UKL |
| DBxref | InterPro:IPR019310 |
| DBxref | PFAM:PF10153 |
| Product | 18S rRNA maturation protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000009.1 | supercontig | ACJE01000009.1:1614411..1615460 - |
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