You are here

Home

ASPNIDRAFT_180987-T1, ASPNIDRAFT_180987-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_180987-T1
Unique NameASPNIDRAFT_180987-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:194850..195808-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_180987-T1 ID=ASPNIDRAFT_180987-T1|Name=ASPNIDRAFT_180987-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=959bp|location=Sequence derived from alignment at ACJE01000009.1:194850..195808- (Aspergillus niger ATCC 1015)
ATGGGGCCAATTTCGTCTCTCCTCGTCTCACCGGCCGAGCTACATCACTT
ACTTAAAGCTGCCTCAACTGCATTCCGAATTGTCCCTGTCGCAGCGGGAA
ACCACTCCACGCTTCCATCCTTCGAATCTCGTCATGTACCCAACTCTGTG
TAAGCCAATCCTCCACCTACTCTGTCCGTTTGACCTCCATCTGATTACAA
TCAAACAAAAGGTTCTTCAACATGGATGCAGTCAAAGACACCAACTCACC
CTACCCGATGATGCTGCCCTCTTCAGCCCAGTTTGCAACGTACATGGCAG
AGCGTGGCATCCGCCGGGATGACGTTCTAGTCATCTACGACACCTTCGAG
ACGGGTCTCCGCTTGTCTCCCCGTGTCGCATGGACCTGTCAGCACTTCGG
ACACAAGAATGTTCACGTATTGAACAATTTTGCCAACTACGTAAAAGAGG
GGTTTCCCGTCGCTTCCGGGCAGATGCGGACGCCAGTGTCTTCGACAACT
AGCGAGATGGATGAAGCTACCAGCATTGATCCGGACCCCGAGGCAGACAA
CGTGATTACCTTCGAGCACTTACGTTGTATGGTTAAGGACCCATCGCAGA
AAGGAAAATTTCAGATCATCGATGCCAGACCAAATGACTTGTTTTCTGGA
CGTGCTGCAGCCAACGGCGCGAGTGCTTCTGTGAGATTGGGACATATGCC
ATCTGCTATCAATGTTCCTTTTGATTCCGTTCTTGGTCTAGACAAAACAT
TCCTTCCTCCGGCAGAGCTAAGGGACCAGTTCGTGAAATGGAGAGTAAGA
GAAGACGTGCCGGCTGTGTTGACCTGTAATAGCGGTGTTACTGCTGCAGT
GGTAGATCTGGCGCTGCGGGTGGCTGGCCTGAATGTGAAGACGAGCCTTT
ATGATGGGAGTTGGAGTGAGTGGGCTGATCGAGTGGATGAAGATGGTTTG
ATTGTTATA
back to top

Coding sequence (CDS) from alignment at ACJE01000009.1:194850..195808-

>ASPNIDRAFT_180987-T1 ID=ASPNIDRAFT_180987-T1|Name=ASPNIDRAFT_180987-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1792bp|location=Sequence derived from alignment at ACJE01000009.1:194850..195808- (Aspergillus niger ATCC 1015)
GTTCTTCAACATGGATGCAGTCAAAGACACCAACTCACCCTACCCGATGA
TGCTGCCCTCTTCAGCCCAGTTTGCAACGTACATGGCAGAGCGTGGCATC
CGCCGGGATGACGTTCTAGTCATCTACGACACCTTCGAGACGGGTCTCCG
CTTGTCTCCCCGTGTCGCATGGACCTGTCAGCACTTCGGACACAAGAATG
TTCACGTATTGAACAATTTTGCCAACTACGTAAAAGAGGGGTTTCCCGTC
GCTTCCGGGCAGATGCGGACGCCAGTGTCTTCGACAACTAGCGAGATGGA
TGAAGCTACCAGCATTGATCCGGACCCCGAGGCAGACAACGTGATTACCT
TCGAGCACTTACGTTGTATGGTTAAGGACCCATCGCAGAAAGGAAAATTT
CAGATCATCGATGCCAGACCAAATGACTTGTTTTCTGGACGTGCTGCAGC
CAACGGCGCGAGTGCTTCTGTGAGATTGGGACATATGCCATCTGCTATCA
ATGTTCCTTTTGATTCCGTTCTTGGTCTAGACAAAACATTCCTTCCTCCG
GCAGAGCTAAGGGACCAGTTCGTGAAATGGAGAGTAAGAGAAGACGTGCC
GGCTGTGTTGACCTGTAATAGCGGTGTTACTGCTGCAGTGGTAGATCTGG
CGCTGCGGGTGGCTGGCCTGAATGTGAAGACGAGCCTTTATGATGGGAGT
TGGAGTGAGTGGGCTGATCGAGTGGATGAAGATGGTTTGATTGTTATATG
GGGCCAATTTCGTCTCTCCTCGTCTCACCGGCCGAGCTACATCACTTACT
TAAAGCTGCCTCAACTGCATTCCGAATTGTCCCTGTCGCAGCGGGAAACC
ACTCCACGCTTCCATCCTTCGAATCTCGTCATGTACCCAACTCTGTGTTC
TTCAACATGGATGCAGTCAAAGACACCAACTCACCCTACCCGATGATGCT
GCCCTCTTCAGCCCAGTTTGCAACGTACATGGCAGAGCGTGGCATCCGCC
GGGATGACGTTCTAGTCATCTACGACACCTTCGAGACGGGTCTCCGCTTG
TCTCCCCGTGTCGCATGGACCTGTCAGCACTTCGGACACAAGAATGTTCA
CGTATTGAACAATTTTGCCAACTACGTAAAAGAGGGGTTTCCCGTCGCTT
CCGGGCAGATGCGGACGCCAGTGTCTTCGACAACTAGCGAGATGGATGAA
GCTACCAGCATTGATCCGGACCCCGAGGCAGACAACGTGATTACCTTCGA
GCACTTACGTTGTATGGTTAAGGACCCATCGCAGAAAGGAAAATTTCAGA
TCATCGATGCCAGACCAAATGACTTGTTTTCTGGACGTGCTGCAGCCAAC
GGCGCGAGTGCTTCTGTGAGATTGGGACATATGCCATCTGCTATCAATGT
TCCTTTTGATTCCGTTCTTGGTCTAGACAAAACATTCCTTCCTCCGGCAG
AGCTAAGGGACCAGTTCGTGAAATGGAGAGTAAGAGAAGACGTGCCGGCT
GTGTTGACCTGTAATAGCGGTGTTACTGCTGCAGTGGTAGATCTGGCGCT
GCGGGTGGCTGGCCTGAATGTGAAGACGAGCCTTTATGATGGGAGTTGGA
GTGAGTGGGCTGATCGAGTGGATGAAGATGGTTTGATTGTTATATGGGGC
CAATTTCGTCTCTCCTCGTCTCACCGGCCGAGCTACATCACTTACTTAAA
GCTGCCTCAACTGCATTCCGAATTGTCCCTGTCGCAGCGGGAAACCACTC
CACGCTTCCATCCTTCGAATCTCGTCATGTACCCAACTCTGT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_180987ASPNIDRAFT_180987Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_180987-T1ASPNIDRAFT_180987-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_180987-T1.cdsASPNIDRAFT_180987-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_180987-T1.utr3p1ASPNIDRAFT_180987-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_180987-T1.exon2ASPNIDRAFT_180987-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_180987-T1.exon1ASPNIDRAFT_180987-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR036873
DBxrefInterPro:IPR001763
DBxrefPFAM:PF00581
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:194850..195808 -
Powered by Drupal