You are here

Home

ASPNIDRAFT_181306-T1, ASPNIDRAFT_181306-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_181306-T1
Unique NameASPNIDRAFT_181306-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:1355310..1356356+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_181306-T1 ID=ASPNIDRAFT_181306-T1|Name=ASPNIDRAFT_181306-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1047bp|location=Sequence derived from alignment at ACJE01000009.1:1355310..1356356+ (Aspergillus niger ATCC 1015)
ATGGATTATTCGTTCTATTCAAACCATCCCCAGCAACCTTATCCTCTCTA
CGGCGTCCACGGGCTGCCCACCCCCGACCAAGGCAATCCGGCCCCTCAAG
CCGAGGCCATACAGGGCGCTTTCGCTCCCTTGGTCGGTCTCTCTTGTTTT
TGTGGACACTAGTCATATAAATTGCTCATGACGCTGACTTGTGGAAAGGG
AGCGCAAAACTACCAGCCTTTCGATCCGAACCTGCGCTTTCAGGATCCTC
ACGCAGCCGCTGCCTTCGTTGCCCCGCCACACTCGCCTCCCGAGTCCCTC
ACCAAGCAGTCGGTTTCCAGCAATGACTACTCCAATCAGAACGTTGATCG
AGCCTCTTACGATGGAGATGACCAGCTCTTAGACCAAAGTCTTGGCCGGA
GCAGCAGCGAGGAGAAAGAGAGTCTGACTCCGGCGCAATCAAAGCGAAAG
GCTCAGAACAGAGCTGCGTGAGTGGTTCCAGATCTAGGACTGCGTTATAT
CCCCTGAAACTAATCTCTGGTTACTGAAATCAGCCAGCGCGCATTTCGTG
AACGCAAGGAACGACATGTGCGTGAACTGGAGGAGAAAGTTAGCAATCTT
GAAAATGCATCGAACACTCTTGTAGCGGACAATGAGCGATTGAAAAGAGA
GTTGGCAAAGTTCACAACTGAAAATGAAATACTTCGGGCAACGTCGACTT
CAATGCGCCAGTCCGGCCAGCGCTCCACCGATGAGGAACCGACAACGACG
GGGCCATTGCAATACTCGCCCACGGATTTCAAGTCCGATGCCGGTGGGGG
TAATGGCCCTGCCCATCGCGTCACTATATGCGGAAAGACAGGCGAGAAAC
TCCTTGACGCGGGAGCCACCTGGGATCTCATCCAGAAGCACGAGCTCTTC
AAGCGTGGCCTAGTGAATATTGGCGATGTCTCGGGTCGGTTGCAAGGTAC
TGCTCAATGCGACGGGCAGGGGCCTGCCTTCCGGGAAAGCCAGGTCCTCC
AGGCTATTGAAGAAAGTGCAGCTGCTGGCAACGATGACTTGTTGTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000009.1:1355310..1356356+

>ASPNIDRAFT_181306-T1 ID=ASPNIDRAFT_181306-T1|Name=ASPNIDRAFT_181306-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2745bp|location=Sequence derived from alignment at ACJE01000009.1:1355310..1356356+ (Aspergillus niger ATCC 1015)
ATGGATTATTCGTTCTATTCAAACCATCCCCAGCAACCTTATCCTCTCTA
CGGCGTCCACGGGCTGCCCACCCCCGACCAAGGCAATCCGGCCCCTCAAG
CCGAGGCCATACAGGGCGCTTTCGCTCCCTTGGTCGCGCAAAACTACCAG
CCTTTCGATCCGAACCTGCGCTTTCAGGATCCTCACGCAGCCGCTGCCTT
CGTTGCCCCGCCACACTCGCCTCCCGAGTCCCTCACCAAGCAGTCGGTTT
CCAGCAATGACTACTCCAATCAGAACGTTGATCGAGCCTCTTACGATGGA
GATGACCAGCTCTTAGACCAAAGTCTTGGCCGGAGCAGCAGCGAGGAGAA
AGAGAGTCTGACTCCGGCGCAATCAAAGCGAAAGGCTCAGAACAGAGCTG
CCCAGCGCGCATTTCGTGAACGCAAGGAACGACATGTGCGTGAACTGGAG
GAGAAAGTTAGCAATCTTGAAAATGCATCGAACACTCTTGTAGCGGACAA
TGAGCGATTGAAAAGAGAGTTGGCAAAGTTCACAACTGAAAATGAAATAC
TTCGGGCAACGTCGACTTCAATGCGCCAGTCCGGCCAGCGCTCCACCGAT
GAGGAACCGACAACGACGGGGCCATTGCAATACTCGCCCACGGATTTCAA
GTCCGATGCCGGTGGGGGTAATGGCCCTGCCCATCGCGTCACTATATGCG
GAAAGACAGGCGAGAAACTCCTTGACGCGGGAGCCACCTGGGATCTCATC
CAGAAGCACGAGCTCTTCAAGCGTGGCCTAGTGAATATTGGCGATGTCTC
GGGTCGGTTGCAAGGTACTGCTCAATGCGACGGGCAGGGGCCTGCCTTCC
GGGAAAGCCAGGTCCTCCAGGCTATTGAAGAAAGTGCAGCTGCTGGCAAC
GATGACTTGTTGTGAATGGATTATTCGTTCTATTCAAACCATCCCCAGCA
ACCTTATCCTCTCTACGGCGTCCACGGGCTGCCCACCCCCGACCAAGGCA
ATCCGGCCCCTCAAGCCGAGGCCATACAGGGCGCTTTCGCTCCCTTGGTC
GCGCAAAACTACCAGCCTTTCGATCCGAACCTGCGCTTTCAGGATCCTCA
CGCAGCCGCTGCCTTCGTTGCCCCGCCACACTCGCCTCCCGAGTCCCTCA
CCAAGCAGTCGGTTTCCAGCAATGACTACTCCAATCAGAACGTTGATCGA
GCCTCTTACGATGGAGATGACCAGCTCTTAGACCAAAGTCTTGGCCGGAG
CAGCAGCGAGGAGAAAGAGAGTCTGACTCCGGCGCAATCAAAGCGAAAGG
CTCAGAACAGAGCTGCCCAGCGCGCATTTCGTGAACGCAAGGAACGACAT
GTGCGTGAACTGGAGGAGAAAGTTAGCAATCTTGAAAATGCATCGAACAC
TCTTGTAGCGGACAATGAGCGATTGAAAAGAGAGTTGGCAAAGTTCACAA
CTGAAAATGAAATACTTCGGGCAACGTCGACTTCAATGCGCCAGTCCGGC
CAGCGCTCCACCGATGAGGAACCGACAACGACGGGGCCATTGCAATACTC
GCCCACGGATTTCAAGTCCGATGCCGGTGGGGGTAATGGCCCTGCCCATC
GCGTCACTATATGCGGAAAGACAGGCGAGAAACTCCTTGACGCGGGAGCC
ACCTGGGATCTCATCCAGAAGCACGAGCTCTTCAAGCGTGGCCTAGTGAA
TATTGGCGATGTCTCGGGTCGGTTGCAAGGTACTGCTCAATGCGACGGGC
AGGGGCCTGCCTTCCGGGAAAGCCAGGTCCTCCAGGCTATTGAAGAAAGT
GCAGCTGCTGGCAACGATGACTTGTTGTGAATGGATTATTCGTTCTATTC
AAACCATCCCCAGCAACCTTATCCTCTCTACGGCGTCCACGGGCTGCCCA
CCCCCGACCAAGGCAATCCGGCCCCTCAAGCCGAGGCCATACAGGGCGCT
TTCGCTCCCTTGGTCGCGCAAAACTACCAGCCTTTCGATCCGAACCTGCG
CTTTCAGGATCCTCACGCAGCCGCTGCCTTCGTTGCCCCGCCACACTCGC
CTCCCGAGTCCCTCACCAAGCAGTCGGTTTCCAGCAATGACTACTCCAAT
CAGAACGTTGATCGAGCCTCTTACGATGGAGATGACCAGCTCTTAGACCA
AAGTCTTGGCCGGAGCAGCAGCGAGGAGAAAGAGAGTCTGACTCCGGCGC
AATCAAAGCGAAAGGCTCAGAACAGAGCTGCCCAGCGCGCATTTCGTGAA
CGCAAGGAACGACATGTGCGTGAACTGGAGGAGAAAGTTAGCAATCTTGA
AAATGCATCGAACACTCTTGTAGCGGACAATGAGCGATTGAAAAGAGAGT
TGGCAAAGTTCACAACTGAAAATGAAATACTTCGGGCAACGTCGACTTCA
ATGCGCCAGTCCGGCCAGCGCTCCACCGATGAGGAACCGACAACGACGGG
GCCATTGCAATACTCGCCCACGGATTTCAAGTCCGATGCCGGTGGGGGTA
ATGGCCCTGCCCATCGCGTCACTATATGCGGAAAGACAGGCGAGAAACTC
CTTGACGCGGGAGCCACCTGGGATCTCATCCAGAAGCACGAGCTCTTCAA
GCGTGGCCTAGTGAATATTGGCGATGTCTCGGGTCGGTTGCAAGGTACTG
CTCAATGCGACGGGCAGGGGCCTGCCTTCCGGGAAAGCCAGGTCCTCCAG
GCTATTGAAGAAAGTGCAGCTGCTGGCAACGATGACTTGTTGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_181306ASPNIDRAFT_181306Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_181306-T1.exon1ASPNIDRAFT_181306-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_181306-T1.exon2ASPNIDRAFT_181306-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_181306-T1.exon3ASPNIDRAFT_181306-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_181306-T1.cdsASPNIDRAFT_181306-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_181306-T1ASPNIDRAFT_181306-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR004827
DBxrefPFAM:PF00170
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:1355310..1356356 +
Powered by Drupal