You are here

Home

ASPNIDRAFT_181931-T1, ASPNIDRAFT_181931-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_181931-T1
Unique NameASPNIDRAFT_181931-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:866571..867691+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_181931-T1 ID=ASPNIDRAFT_181931-T1|Name=ASPNIDRAFT_181931-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1121bp|location=Sequence derived from alignment at ACJE01000008.1:866571..867691+ (Aspergillus niger ATCC 1015)
ATGAACCAAGGAATCAGCTCGCTTGCCATTAACCCCGCATCTCCTTATCA
TAGCACGAATGCTTCGCAAACCTCGATTGTTTCGGGTCTCCAACGAGAGC
GCGGTATTTCTATGGACGTGAATATGAACAATTCCTATCGCGGCCCTCGA
TACTCTGGAGGCCAACCACTCTCTCCACTTGGCCCGCGGGCTAGTGAACA
TCGCGGATTTGCAGCTGGCCGCACGGCACCTGCCATCTCGTCGAATCCTC
GCTCTGAAATCTACAATGCAGAGGCACCCACCGCTGGTCTTGCATACGCT
TTCCCGGATCCTGACGTTGCGCGATCCAATTCTGTCTCTTCTACCACCGA
AAAGTCAACCAATCAATTCTCCCGCAAAGGAAGTACTGCTGAGTCACTTG
CCAGTAGCGTCTTCTCTGATGCACGGTTACCTCGTGGACAGCATGGTATG
TCTTCTGAATCCCTTAAGATATACGAACTACGATTCCTGACCTTTTTCTA
GAACTTCCTCAAAATGTGCACCATCATTCTTTACAACACAAGCAAGTCCG
TGGTCTTATTGGAGAAGCAGACGCACATAGTGGTAGTACGCCTTACAGCA
GAACTCCCGAGCTGAGGGTAACGCACAAGTTGGCGGAGCGAAAGCGTCGC
AGTGAGATGAAGGATTGCTTCGAAGCTTTGCGTGTCCGCCTCCCACAAAG
TCAGAACAATAAATCGAGTAAATGGGAGACACTCACAAGAGGTATTTCAT
AACTATCGCAGGCACAGCCCTGGTGTTGACGTTGTTCTTTTACTAACGTG
CTTGTAGCTATCGAATATATCTCACATCTAGAAAAGATGGTTACTACCAC
TCGCAGAGAAAATGACGTGCTGAGGAGCGAACTTGACGAGATGCGGGCGC
AACTCAGTCAGCAGCAAGCCAATGGCCAATCTCGGCAGCCGTCGATCTTT
GAGCATCATCCCGTAACGGTGCCACAGCCGAATGGGCAGGTACATGGCGC
TATGTTTTCCGGTTATGCTCCTGGATCCGCGATGCAGCAAGAGCAACCGC
GAACGCTTCCTCCGCTCATGAACGGGACTGTTGCTCCAATGCAAGGCGTG
CAGTACACCGACGAACGACGG
back to top

Coding sequence (CDS) from alignment at ACJE01000008.1:866571..867691+

>ASPNIDRAFT_181931-T1 ID=ASPNIDRAFT_181931-T1|Name=ASPNIDRAFT_181931-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2871bp|location=Sequence derived from alignment at ACJE01000008.1:866571..867691+ (Aspergillus niger ATCC 1015)
ATGAACCAAGGAATCAGCTCGCTTGCCATTAACCCCGCATCTCCTTATCA
TAGCACGAATGCTTCGCAAACCTCGATTGTTTCGGGTCTCCAACGAGAGC
GCGGTATTTCTATGGACGTGAATATGAACAATTCCTATCGCGGCCCTCGA
TACTCTGGAGGCCAACCACTCTCTCCACTTGGCCCGCGGGCTAGTGAACA
TCGCGGATTTGCAGCTGGCCGCACGGCACCTGCCATCTCGTCGAATCCTC
GCTCTGAAATCTACAATGCAGAGGCACCCACCGCTGGTCTTGCATACGCT
TTCCCGGATCCTGACGTTGCGCGATCCAATTCTGTCTCTTCTACCACCGA
AAAGTCAACCAATCAATTCTCCCGCAAAGGAAGTACTGCTGAGTCACTTG
CCAAACTTCCTCAAAATGTGCACCATCATTCTTTACAACACAAGCAAGTC
CGTGGTCTTATTGGAGAAGCAGACGCACATAGTGGTAGTACGCCTTACAG
CAGAACTCCCGAGCTGAGGGTAACGCACAAGTTGGCGGAGCGAAAGCGTC
GCAGTGAGATGAAGGATTGCTTCGAAGCTTTGCGTGTCCGCCTCCCACAA
AGTCAGAACAATAAATCGAGTAAATGGGAGACACTCACAAGAGCTATCGA
ATATATCTCACATCTAGAAAAGATGGTTACTACCACTCGCAGAGAAAATG
ACGTGCTGAGGAGCGAACTTGACGAGATGCGGGCGCAACTCAGTCAGCAG
CAAGCCAATGGCCAATCTCGGCAGCCGTCGATCTTTGAGCATCATCCCGT
AACGGTGCCACAGCCGAATGGGCAGGTACATGGCGCTATGTTTTCCGGTT
ATGCTCCTGGATCCGCGATGCAGCAAGAGCAACCGCGAACGCTTCCTCCG
CTCATGAACGGGACTGTTGCTCCAATGCAAGGCGTGCAGTACACCGACGA
ACGACGGATGAACCAAGGAATCAGCTCGCTTGCCATTAACCCCGCATCTC
CTTATCATAGCACGAATGCTTCGCAAACCTCGATTGTTTCGGGTCTCCAA
CGAGAGCGCGGTATTTCTATGGACGTGAATATGAACAATTCCTATCGCGG
CCCTCGATACTCTGGAGGCCAACCACTCTCTCCACTTGGCCCGCGGGCTA
GTGAACATCGCGGATTTGCAGCTGGCCGCACGGCACCTGCCATCTCGTCG
AATCCTCGCTCTGAAATCTACAATGCAGAGGCACCCACCGCTGGTCTTGC
ATACGCTTTCCCGGATCCTGACGTTGCGCGATCCAATTCTGTCTCTTCTA
CCACCGAAAAGTCAACCAATCAATTCTCCCGCAAAGGAAGTACTGCTGAG
TCACTTGCCAAACTTCCTCAAAATGTGCACCATCATTCTTTACAACACAA
GCAAGTCCGTGGTCTTATTGGAGAAGCAGACGCACATAGTGGTAGTACGC
CTTACAGCAGAACTCCCGAGCTGAGGGTAACGCACAAGTTGGCGGAGCGA
AAGCGTCGCAGTGAGATGAAGGATTGCTTCGAAGCTTTGCGTGTCCGCCT
CCCACAAAGTCAGAACAATAAATCGAGTAAATGGGAGACACTCACAAGAG
CTATCGAATATATCTCACATCTAGAAAAGATGGTTACTACCACTCGCAGA
GAAAATGACGTGCTGAGGAGCGAACTTGACGAGATGCGGGCGCAACTCAG
TCAGCAGCAAGCCAATGGCCAATCTCGGCAGCCGTCGATCTTTGAGCATC
ATCCCGTAACGGTGCCACAGCCGAATGGGCAGGTACATGGCGCTATGTTT
TCCGGTTATGCTCCTGGATCCGCGATGCAGCAAGAGCAACCGCGAACGCT
TCCTCCGCTCATGAACGGGACTGTTGCTCCAATGCAAGGCGTGCAGTACA
CCGACGAACGACGGATGAACCAAGGAATCAGCTCGCTTGCCATTAACCCC
GCATCTCCTTATCATAGCACGAATGCTTCGCAAACCTCGATTGTTTCGGG
TCTCCAACGAGAGCGCGGTATTTCTATGGACGTGAATATGAACAATTCCT
ATCGCGGCCCTCGATACTCTGGAGGCCAACCACTCTCTCCACTTGGCCCG
CGGGCTAGTGAACATCGCGGATTTGCAGCTGGCCGCACGGCACCTGCCAT
CTCGTCGAATCCTCGCTCTGAAATCTACAATGCAGAGGCACCCACCGCTG
GTCTTGCATACGCTTTCCCGGATCCTGACGTTGCGCGATCCAATTCTGTC
TCTTCTACCACCGAAAAGTCAACCAATCAATTCTCCCGCAAAGGAAGTAC
TGCTGAGTCACTTGCCAAACTTCCTCAAAATGTGCACCATCATTCTTTAC
AACACAAGCAAGTCCGTGGTCTTATTGGAGAAGCAGACGCACATAGTGGT
AGTACGCCTTACAGCAGAACTCCCGAGCTGAGGGTAACGCACAAGTTGGC
GGAGCGAAAGCGTCGCAGTGAGATGAAGGATTGCTTCGAAGCTTTGCGTG
TCCGCCTCCCACAAAGTCAGAACAATAAATCGAGTAAATGGGAGACACTC
ACAAGAGCTATCGAATATATCTCACATCTAGAAAAGATGGTTACTACCAC
TCGCAGAGAAAATGACGTGCTGAGGAGCGAACTTGACGAGATGCGGGCGC
AACTCAGTCAGCAGCAAGCCAATGGCCAATCTCGGCAGCCGTCGATCTTT
GAGCATCATCCCGTAACGGTGCCACAGCCGAATGGGCAGGTACATGGCGC
TATGTTTTCCGGTTATGCTCCTGGATCCGCGATGCAGCAAGAGCAACCGC
GAACGCTTCCTCCGCTCATGAACGGGACTGTTGCTCCAATGCAAGGCGTG
CAGTACACCGACGAACGACGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_181931ASPNIDRAFT_181931Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_181931-T1.exon1ASPNIDRAFT_181931-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_181931-T1.exon2ASPNIDRAFT_181931-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_181931-T1.exon3ASPNIDRAFT_181931-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_181931-T1.cdsASPNIDRAFT_181931-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_181931-T1ASPNIDRAFT_181931-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036638
DBxrefInterPro:IPR011598
DBxrefPFAM:PF00010
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:866571..867691 +
Powered by Drupal