|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000008.1:1122871..1125508- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_182167-T1 ID=ASPNIDRAFT_182167-T1|Name=ASPNIDRAFT_182167-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2638bp|location=Sequence derived from alignment at ACJE01000008.1:1122871..1125508- (Aspergillus niger ATCC 1015) ATGCCAATCGCAGCGCTCCCCCTAGCGGCGGTGCGGGCAATTGGCTCCGC
GTCTGTTATTTCCGATCCTTGCTCCATTGTCAAGGAGCTCCTGGACAACG
CCTTGGATGCCGCAGCGACTTCGGTACTTATTGAGATCTCACAAAATACA
CTTGATGTAATACAAGTGAAAGACAATGGCCATGGTATCCCCTCTACCGA
TCATCCTTTTGTCTGCAAACGCACCTTCACTAGCAAAATTCAATCCGTCG
AAGATCTTAGAACTATCGGCGGAAAGTCTCTAGGTTTTAGAGGCGAAGCA
CTTGCTAGTGCGGCTGAGGTATCCGGTGGCGTGACTATCACCACTAGATT
ACAGCATGAGCCGGTTGGTTCTTCTATCAGATACAGCAGAAATGGAGAGC
TTCTAAGGTGATTCCTACCGCCAATTGAGATAACCAAAGCTGACCGATGT
AGTACCCAGCGAGCGTCACATCCGGTAGGAACCAGTGTTCGCATAGCGGA
TTTGTTCAAACACATCCCAGTCCGGAGACAAACTACGTTAAAGAAAGCGG
CCAAGACGGTCGTGAGGATCAAGAAGCTCGTACAAGCATACGCTATTGCC
CAACCCTCCAAACGTTTATCCTTGAAGGTCCTCAAAGCAAAGACAGAGAC
GAACAACTGGATGTATGCCCCAGGCAACAACACTAGCCTTGTAGATGCAG
TATTGAAAGTTGTGGGCACCGAAGTCGCCTCTAGCTGTCTGGTCAAGGTC
TGGCCATCTGAGAATGACAGCGACAGGCCATTTCGGATACTCGCGTTCCT
TCCAAAGCTAGAATCCGGTATGTAGCTGCTCTGTGAGACCCTGAGTGCGA
CTGACAGTGTCAGACCTTACGAAACTGAACGGCTTGGGGCAGTATATCAG
TATCGATGGCAGGCCCTTATCGACCACCCGAGGGATCGCGCAAGATATTG
CGAAACTATATAAGTCTTATATCCGCGTCGTTGCTTCCAGTAAGGAGGCA
GCTATAAACATTACAGATCCGCTTCTGTGCCTTCACCTCCAGTGTACTAA
TGCAAGCTACGACGTCAACATTGAGCCCGCTAAAGATGATGTTCTTCTTG
AAGATCGGGAAGAGCTTCTTTCTTTGGTAGAAGAGCTTTTGTGTGATGTG
TACGGCGTTCAAGCAAAATCAACAGAGAGACCGAGAAATATCGATAAAGG
GAAAGAGCCCGCTTCCTATCGAAACTCATTCGAATTGCTTCTTGCCCGTA
AAAGTCCGGATGAATCAAGGGCTAGAAGCAGTTATGGCTCTTCCTCGACA
CCACGGACTCCGGATGTAGAGGATCCAGACAGCTTCAATACTGAGAATCG
TCCGGAGACGAGAATCGCGATTAGCAACCCCTGGTCAATATCTCAGCCAA
GCAAGCAGATGCCGACGCGCGACAGTTCCTCATCGCGCAGTGACACTGAC
AAGATAGTGAGACATGAAATTGTGCGGTATCCGACTGAAAGCCGAAGAAA
CTCACAGGAAACACTGCAGACATGCTCTCCAGGGTCTCTCCTACCGAGTC
CCTCTATCAGCTCCACGACTGCTGCTGGCTCCACGACTGCTGCTGGCTAC
GTGACTGAAGCTCAGTCTTCGCCGTCTAGTCCATGGACGCCTCGAACTCC
TCTTCCGAGGACAAGGCAAACCTCGATGGACCATGACAGACATCCCGGAA
ACGGAGCCCTTGATGGCTGGTTGGGGAAAACTCCAGCCTCCTTGTCTCAG
TCAACCACAGGCGAGGTGCCCACAGGAAATGGGGACGAGCGCTCATTGCA
GCAGTTGGCGCAAGAAAGATTCGGTTCACCAGAGAGGTCATCAGGCGACC
CAGGATCGACAGAGGATGGTGTTGTTACTACTCATAATCAGTCTCCCAAA
TTTCAGGCTAGCTCTGCAGAAGCAGAAACGGAGCATGAAGGAGCTGGTAC
TCCCTTGCTTGGGAGCGCTGCAGACTCCGAACTTCGGGAAAGCCACGCAC
CCGACCGTGGAAGGTCCTCGGCTACTCTACGTCAGCTTCTTTCTGAGAAT
AACCACCAAGAGCTGGGACGTGCACTCGACTTTGAGAACCGCAAGAGGGA
GGCTATCCTTAAGCGCCGGGAACAACTCAAAAGCCAGCGAAACCCGAGCT
CACCCCATCTAAGTCGGTATCTAGCTGCCAAAGCCGCACTCCAGAAGCAC
CCAGATGCTGATCGGGACGAGCCGACGAAGCCTGTGCTGGGTCCACATGA
CCCACGGTCGTATTTAATGCGTTACAAGGTGCAAGATCAGAACGAAGATG
GCATATCAAAGACCAGAAGGATTAACACAGAGAAGCTGCCATTAGAAAAC
ATTCCAAATGGGTGTGAGTTGTACAGTCTGGCTCTGACCCAAGAGGCCGA
CATTTCGCTCATTTCAACCACATGCGACCATTTAACCAAGACAGATCTTT
ATACCGGATGCGGAGACCAGTGTGAAGCATTTAACCCGCCACATAAAGAT
ACAGAAACAATGCTTGATCTCTGGAGGAATCAACTGACGAGTTTGATACA
GCGCAATTACCGGACTTCAGAACGGTCGGGATTGCCGGATGTGCACTTGA
ATTTCTCTCGTTTAGCGCAGCGCGGGCATTCCAAGTGA back to topCoding sequence (CDS) from alignment at ACJE01000008.1:1122871..1125508- >ASPNIDRAFT_182167-T1 ID=ASPNIDRAFT_182167-T1|Name=ASPNIDRAFT_182167-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=7659bp|location=Sequence derived from alignment at ACJE01000008.1:1122871..1125508- (Aspergillus niger ATCC 1015) TGTCAGACCTTACGAAACTGAACGGCTTGGGGCAGTATATCAGTATCGAT GGCAGGCCCTTATCGACCACCCGAGGGATCGCGCAAGATATTGCGAAACT ATATAAGTCTTATATCCGCGTCGTTGCTTCCAGTAAGGAGGCAGCTATAA ACATTACAGATCCGCTTCTGTGCCTTCACCTCCAGTGTACTAATGCAAGC TACGACGTCAACATTGAGCCCGCTAAAGATGATGTTCTTCTTGAAGATCG GGAAGAGCTTCTTTCTTTGGTAGAAGAGCTTTTGTGTGATGTGTACGGCG TTCAAGCAAAATCAACAGAGAGACCGAGAAATATCGATAAAGGGAAAGAG CCCGCTTCCTATCGAAACTCATTCGAATTGCTTCTTGCCCGTAAAAGTCC GGATGAATCAAGGGCTAGAAGCAGTTATGGCTCTTCCTCGACACCACGGA CTCCGGATGTAGAGGATCCAGACAGCTTCAATACTGAGAATCGTCCGGAG ACGAGAATCGCGATTAGCAACCCCTGGTCAATATCTCAGCCAAGCAAGCA GATGCCGACGCGCGACAGTTCCTCATCGCGCAGTGACACTGACAAGATAG TGAGACATGAAATTGTGCGGTATCCGACTGAAAGCCGAAGAAACTCACAG GAAACACTGCAGACATGCTCTCCAGGGTCTCTCCTACCGAGTCCCTCTAT CAGCTCCACGACTGCTGCTGGCTCCACGACTGCTGCTGGCTACGTGACTG AAGCTCAGTCTTCGCCGTCTAGTCCATGGACGCCTCGAACTCCTCTTCCG AGGACAAGGCAAACCTCGATGGACCATGACAGACATCCCGGAAACGGAGC CCTTGATGGCTGGTTGGGGAAAACTCCAGCCTCCTTGTCTCAGTCAACCA CAGGCGAGGTGCCCACAGGAAATGGGGACGAGCGCTCATTGCAGCAGTTG GCGCAAGAAAGATTCGGTTCACCAGAGAGGTCATCAGGCGACCCAGGATC GACAGAGGATGGTGTTGTTACTACTCATAATCAGTCTCCCAAATTTCAGG CTAGCTCTGCAGAAGCAGAAACGGAGCATGAAGGAGCTGGTACTCCCTTG CTTGGGAGCGCTGCAGACTCCGAACTTCGGGAAAGCCACGCACCCGACCG TGGAAGGTCCTCGGCTACTCTACGTCAGCTTCTTTCTGAGAATAACCACC AAGAGCTGGGACGTGCACTCGACTTTGAGAACCGCAAGAGGGAGGCTATC CTTAAGCGCCGGGAACAACTCAAAAGCCAGCGAAACCCGAGCTCACCCCA TCTAAGTCGGTATCTAGCTGCCAAAGCCGCACTCCAGAAGCACCCAGATG CTGATCGGGACGAGCCGACGAAGCCTGTGCTGGGTCCACATGACCCACGG TCGTATTTAATGCGTTACAAGGTGCAAGATCAGAACGAAGATGGCATATC AAAGACCAGAAGGATTAACACAGAGAAGCTGCCATTAGAAAACATTCCAA ATGGGTGTGAGTTGTACAGTCTGGCTCTGACCCAAGAGGCCGACATTTCG CTCATTTCAACCACATGCGACCATTTAACCAAGACAGATCTTTATACCGG ATGCGGAGACCAGTGTGAAGCATTTAACCCGCCACATAAAGATACAGAAA CAATGCTTGATCTCTGGAGGAATCAACTGACGAGTTTGATACAGCGCAAT TACCGGACTTCAGAACGGTCGGGATTGCCGGATGTGCACTTGAATTTCTC TCGTTTAGCGCAGCGCGGGCATTCCAAGTGATACCCAGCGAGCGTCACAT CCGGTAGGAACCAGTGTTCGCATAGCGGATTTGTTCAAACACATCCCAGT CCGGAGACAAACTACGTTAAAGAAAGCGGCCAAGACGGTCGTGAGGATCA AGAAGCTCGTACAAGCATACGCTATTGCCCAACCCTCCAAACGTTTATCC TTGAAGGTCCTCAAAGCAAAGACAGAGACGAACAACTGGATGTATGCCCC AGGCAACAACACTAGCCTTGTAGATGCAGTATTGAAAGTTGTGGGCACCG AAGTCGCCTCTAGCTGTCTGGTCAAGGTCTGGCCATCTGAGAATGACAGC GACAGGCCATTTCGGATACTCGCGTTCCTTCCAAAGCTAGAATCCGATGC CAATCGCAGCGCTCCCCCTAGCGGCGGTGCGGGCAATTGGCTCCGCGTCT GTTATTTCCGATCCTTGCTCCATTGTCAAGGAGCTCCTGGACAACGCCTT GGATGCCGCAGCGACTTCGGTACTTATTGAGATCTCACAAAATACACTTG ATGTAATACAAGTGAAAGACAATGGCCATGGTATCCCCTCTACCGATCAT CCTTTTGTCTGCAAACGCACCTTCACTAGCAAAATTCAATCCGTCGAAGA TCTTAGAACTATCGGCGGAAAGTCTCTAGGTTTTAGAGGCGAAGCACTTG CTAGTGCGGCTGAGGTATCCGGTGGCGTGACTATCACCACTAGATTACAG CATGAGCCGGTTGGTTCTTCTATCAGATACAGCAGAAATGGAGAGCTTCT AAGTGTCAGACCTTACGAAACTGAACGGCTTGGGGCAGTATATCAGTATC GATGGCAGGCCCTTATCGACCACCCGAGGGATCGCGCAAGATATTGCGAA ACTATATAAGTCTTATATCCGCGTCGTTGCTTCCAGTAAGGAGGCAGCTA TAAACATTACAGATCCGCTTCTGTGCCTTCACCTCCAGTGTACTAATGCA AGCTACGACGTCAACATTGAGCCCGCTAAAGATGATGTTCTTCTTGAAGA TCGGGAAGAGCTTCTTTCTTTGGTAGAAGAGCTTTTGTGTGATGTGTACG GCGTTCAAGCAAAATCAACAGAGAGACCGAGAAATATCGATAAAGGGAAA GAGCCCGCTTCCTATCGAAACTCATTCGAATTGCTTCTTGCCCGTAAAAG TCCGGATGAATCAAGGGCTAGAAGCAGTTATGGCTCTTCCTCGACACCAC GGACTCCGGATGTAGAGGATCCAGACAGCTTCAATACTGAGAATCGTCCG GAGACGAGAATCGCGATTAGCAACCCCTGGTCAATATCTCAGCCAAGCAA GCAGATGCCGACGCGCGACAGTTCCTCATCGCGCAGTGACACTGACAAGA TAGTGAGACATGAAATTGTGCGGTATCCGACTGAAAGCCGAAGAAACTCA CAGGAAACACTGCAGACATGCTCTCCAGGGTCTCTCCTACCGAGTCCCTC TATCAGCTCCACGACTGCTGCTGGCTCCACGACTGCTGCTGGCTACGTGA CTGAAGCTCAGTCTTCGCCGTCTAGTCCATGGACGCCTCGAACTCCTCTT CCGAGGACAAGGCAAACCTCGATGGACCATGACAGACATCCCGGAAACGG AGCCCTTGATGGCTGGTTGGGGAAAACTCCAGCCTCCTTGTCTCAGTCAA CCACAGGCGAGGTGCCCACAGGAAATGGGGACGAGCGCTCATTGCAGCAG TTGGCGCAAGAAAGATTCGGTTCACCAGAGAGGTCATCAGGCGACCCAGG ATCGACAGAGGATGGTGTTGTTACTACTCATAATCAGTCTCCCAAATTTC AGGCTAGCTCTGCAGAAGCAGAAACGGAGCATGAAGGAGCTGGTACTCCC TTGCTTGGGAGCGCTGCAGACTCCGAACTTCGGGAAAGCCACGCACCCGA CCGTGGAAGGTCCTCGGCTACTCTACGTCAGCTTCTTTCTGAGAATAACC ACCAAGAGCTGGGACGTGCACTCGACTTTGAGAACCGCAAGAGGGAGGCT ATCCTTAAGCGCCGGGAACAACTCAAAAGCCAGCGAAACCCGAGCTCACC CCATCTAAGTCGGTATCTAGCTGCCAAAGCCGCACTCCAGAAGCACCCAG ATGCTGATCGGGACGAGCCGACGAAGCCTGTGCTGGGTCCACATGACCCA CGGTCGTATTTAATGCGTTACAAGGTGCAAGATCAGAACGAAGATGGCAT ATCAAAGACCAGAAGGATTAACACAGAGAAGCTGCCATTAGAAAACATTC CAAATGGGTGTGAGTTGTACAGTCTGGCTCTGACCCAAGAGGCCGACATT TCGCTCATTTCAACCACATGCGACCATTTAACCAAGACAGATCTTTATAC CGGATGCGGAGACCAGTGTGAAGCATTTAACCCGCCACATAAAGATACAG AAACAATGCTTGATCTCTGGAGGAATCAACTGACGAGTTTGATACAGCGC AATTACCGGACTTCAGAACGGTCGGGATTGCCGGATGTGCACTTGAATTT CTCTCGTTTAGCGCAGCGCGGGCATTCCAAGTGATACCCAGCGAGCGTCA CATCCGGTAGGAACCAGTGTTCGCATAGCGGATTTGTTCAAACACATCCC AGTCCGGAGACAAACTACGTTAAAGAAAGCGGCCAAGACGGTCGTGAGGA TCAAGAAGCTCGTACAAGCATACGCTATTGCCCAACCCTCCAAACGTTTA TCCTTGAAGGTCCTCAAAGCAAAGACAGAGACGAACAACTGGATGTATGC CCCAGGCAACAACACTAGCCTTGTAGATGCAGTATTGAAAGTTGTGGGCA CCGAAGTCGCCTCTAGCTGTCTGGTCAAGGTCTGGCCATCTGAGAATGAC AGCGACAGGCCATTTCGGATACTCGCGTTCCTTCCAAAGCTAGAATCCGA TGCCAATCGCAGCGCTCCCCCTAGCGGCGGTGCGGGCAATTGGCTCCGCG TCTGTTATTTCCGATCCTTGCTCCATTGTCAAGGAGCTCCTGGACAACGC CTTGGATGCCGCAGCGACTTCGGTACTTATTGAGATCTCACAAAATACAC TTGATGTAATACAAGTGAAAGACAATGGCCATGGTATCCCCTCTACCGAT CATCCTTTTGTCTGCAAACGCACCTTCACTAGCAAAATTCAATCCGTCGA AGATCTTAGAACTATCGGCGGAAAGTCTCTAGGTTTTAGAGGCGAAGCAC TTGCTAGTGCGGCTGAGGTATCCGGTGGCGTGACTATCACCACTAGATTA CAGCATGAGCCGGTTGGTTCTTCTATCAGATACAGCAGAAATGGAGAGCT TCTAAGTGTCAGACCTTACGAAACTGAACGGCTTGGGGCAGTATATCAGT ATCGATGGCAGGCCCTTATCGACCACCCGAGGGATCGCGCAAGATATTGC GAAACTATATAAGTCTTATATCCGCGTCGTTGCTTCCAGTAAGGAGGCAG CTATAAACATTACAGATCCGCTTCTGTGCCTTCACCTCCAGTGTACTAAT GCAAGCTACGACGTCAACATTGAGCCCGCTAAAGATGATGTTCTTCTTGA AGATCGGGAAGAGCTTCTTTCTTTGGTAGAAGAGCTTTTGTGTGATGTGT ACGGCGTTCAAGCAAAATCAACAGAGAGACCGAGAAATATCGATAAAGGG AAAGAGCCCGCTTCCTATCGAAACTCATTCGAATTGCTTCTTGCCCGTAA AAGTCCGGATGAATCAAGGGCTAGAAGCAGTTATGGCTCTTCCTCGACAC CACGGACTCCGGATGTAGAGGATCCAGACAGCTTCAATACTGAGAATCGT CCGGAGACGAGAATCGCGATTAGCAACCCCTGGTCAATATCTCAGCCAAG CAAGCAGATGCCGACGCGCGACAGTTCCTCATCGCGCAGTGACACTGACA AGATAGTGAGACATGAAATTGTGCGGTATCCGACTGAAAGCCGAAGAAAC TCACAGGAAACACTGCAGACATGCTCTCCAGGGTCTCTCCTACCGAGTCC CTCTATCAGCTCCACGACTGCTGCTGGCTCCACGACTGCTGCTGGCTACG TGACTGAAGCTCAGTCTTCGCCGTCTAGTCCATGGACGCCTCGAACTCCT CTTCCGAGGACAAGGCAAACCTCGATGGACCATGACAGACATCCCGGAAA CGGAGCCCTTGATGGCTGGTTGGGGAAAACTCCAGCCTCCTTGTCTCAGT CAACCACAGGCGAGGTGCCCACAGGAAATGGGGACGAGCGCTCATTGCAG CAGTTGGCGCAAGAAAGATTCGGTTCACCAGAGAGGTCATCAGGCGACCC AGGATCGACAGAGGATGGTGTTGTTACTACTCATAATCAGTCTCCCAAAT TTCAGGCTAGCTCTGCAGAAGCAGAAACGGAGCATGAAGGAGCTGGTACT CCCTTGCTTGGGAGCGCTGCAGACTCCGAACTTCGGGAAAGCCACGCACC CGACCGTGGAAGGTCCTCGGCTACTCTACGTCAGCTTCTTTCTGAGAATA ACCACCAAGAGCTGGGACGTGCACTCGACTTTGAGAACCGCAAGAGGGAG GCTATCCTTAAGCGCCGGGAACAACTCAAAAGCCAGCGAAACCCGAGCTC ACCCCATCTAAGTCGGTATCTAGCTGCCAAAGCCGCACTCCAGAAGCACC CAGATGCTGATCGGGACGAGCCGACGAAGCCTGTGCTGGGTCCACATGAC CCACGGTCGTATTTAATGCGTTACAAGGTGCAAGATCAGAACGAAGATGG CATATCAAAGACCAGAAGGATTAACACAGAGAAGCTGCCATTAGAAAACA TTCCAAATGGGTGTGAGTTGTACAGTCTGGCTCTGACCCAAGAGGCCGAC ATTTCGCTCATTTCAACCACATGCGACCATTTAACCAAGACAGATCTTTA TACCGGATGCGGAGACCAGTGTGAAGCATTTAACCCGCCACATAAAGATA CAGAAACAATGCTTGATCTCTGGAGGAATCAACTGACGAGTTTGATACAG CGCAATTACCGGACTTCAGAACGGTCGGGATTGCCGGATGTGCACTTGAA TTTCTCTCGTTTAGCGCAGCGCGGGCATTCCAAGTGATACCCAGCGAGCG TCACATCCGGTAGGAACCAGTGTTCGCATAGCGGATTTGTTCAAACACAT CCCAGTCCGGAGACAAACTACGTTAAAGAAAGCGGCCAAGACGGTCGTGA GGATCAAGAAGCTCGTACAAGCATACGCTATTGCCCAACCCTCCAAACGT TTATCCTTGAAGGTCCTCAAAGCAAAGACAGAGACGAACAACTGGATGTA TGCCCCAGGCAACAACACTAGCCTTGTAGATGCAGTATTGAAAGTTGTGG GCACCGAAGTCGCCTCTAGCTGTCTGGTCAAGGTCTGGCCATCTGAGAAT GACAGCGACAGGCCATTTCGGATACTCGCGTTCCTTCCAAAGCTAGAATC CGATGCCAATCGCAGCGCTCCCCCTAGCGGCGGTGCGGGCAATTGGCTCC GCGTCTGTTATTTCCGATCCTTGCTCCATTGTCAAGGAGCTCCTGGACAA CGCCTTGGATGCCGCAGCGACTTCGGTACTTATTGAGATCTCACAAAATA CACTTGATGTAATACAAGTGAAAGACAATGGCCATGGTATCCCCTCTACC GATCATCCTTTTGTCTGCAAACGCACCTTCACTAGCAAAATTCAATCCGT CGAAGATCTTAGAACTATCGGCGGAAAGTCTCTAGGTTTTAGAGGCGAAG CACTTGCTAGTGCGGCTGAGGTATCCGGTGGCGTGACTATCACCACTAGA TTACAGCATGAGCCGGTTGGTTCTTCTATCAGATACAGCAGAAATGGAGA GCTTCTAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0006298 | mismatch repair |
Vocabulary: Molecular Function
Term | Definition |
GO:0005524 | ATP binding |
GO:0030983 | mismatched DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | EggNog:ENOG41 |
DBxref | InterPro:IPR020568 |
DBxref | InterPro:IPR014762 |
DBxref | InterPro:IPR003594 |
DBxref | InterPro:IPR014721 |
DBxref | InterPro:IPR036890 |
DBxref | InterPro:IPR013507 |
DBxref | PFAM:PF13589 |
DBxref | PFAM:PF02518 |
DBxref | PFAM:PF01119 |
Product | DNA mismatch repair protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ACJE01000008.1 | supercontig | ACJE01000008.1:1122871..1125508 - |
|