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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000008.1:1543511..1545548+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_182791-T1 ID=ASPNIDRAFT_182791-T1|Name=ASPNIDRAFT_182791-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2038bp|location=Sequence derived from alignment at ACJE01000008.1:1543511..1545548+ (Aspergillus niger ATCC 1015)
ATGTCAGGCGGCTATGCCTCCCGGTTCGTGGATGTGTCCACCGCACTCTC
TACGCAGGGCAAAGTAAGTGTCATTGGCGTCGTAGTCGACGTCTTCGGCG
GAATATGGAAGTCTAGAGGCTCGTCCAGCTGTATTACCTTCACCATCAAG
GACTCAGGTCTTGACAACGGACATACATGGGACGGGTTGAAAATCAAATA
TTTCAAAGACAATGAGAGCCATTTACCTCCCGTCCAACTACGCGACGTGA
TCCTGATACGAGATCTGTGGGTTCGTGAGGCAAGACTTGACCCCTTCCTC
GGTGACAGACTGACGCTTTGACTGCAGATAAGGAACTTCAAAGGAGACCC
GTTGGGAGTCGCTGCCCAGGACAGAGAAGTACCATGGGCAATCTTTCGCC
TGGACCCGGATCCCACGTCTAGCCCTGCGCCCCTTTGTGGCCCTACGCAC
TTTGAGCCATCTCCTTCAGAGAAGATACATGCTTTGAATTTGTTGAATAG
CCTCACTGCAGTCGATGGTTTTCGCAAAGCTCCAGCACAAGATACTCCAC
GTGGCTCCTATATTGTCCAGGCTGCAATTCCAAATTCCAAACCTTACCCG
CACAAGAGGCTTTCTCTTGTCAAGGATATTGTAGAGCGAAATTATGTTGA
CCTCGTGGGGCAAATTGTCAAGGTCTATACCAACGACAGTGAAAAGGTCG
TCCTCTATTTCACCGATTACACGGCCAACGATGGTCTCGAAGACCGCCAA
ATAAACGATGCCGGTGACAATGACTTTGGCACTGAAGGAGATATCTACGG
TTACCAAAAACGACCCAAGAAGAAATGGACAGGACCAGTTGGACGGATGA
CCCTCACAATCACACTCTGGGAACCCCATGCATCCTATGCGCGCCAACAT
CTGAAGGATAACGATCTCATCCAGCTATACAATGTGCATGTCAAGCGCAG
TCGCATCAATGGGATATTAGAAGCCAGTATCCACACAAACCGCACGAATC
CAAATTCAGTCAATGTACACACCCTGGATCGTCGCAAAGACACGTTTGTC
GAACAATTTCTGCAGCGTAAGACGGAATACTGGAAAGCGAATCCTCGGAA
GCGGGAACTCGAAAACGAAGGCCAGCAGGTTTCGAAGAAAAGCACCAAGA
AACAGCGAAAGAAAGCCGAAAAGGTGGAAGAAGGCCAAGTTCCCATAATA
GCAGCAAGCAGCAAGCGATATGCGCCAAATGAAAACAGTAAGTCATGCCG
TCTTAGTAATAACCACTGGGGCATCTTACAGTTGATTGACAGTCTATGAT
AGTCATAGCAGGCAGCCCGTCCGTCCCTACAATGTCCCTGGAAGCGATCC
TTTCCAACAAACTTCATGACAACATCTCATATGACAACATACAGTACCGC
TTCCCCTTTCAAAACTTCTGCTACCGAACCACAGTCCGTGTGGTCGATTT
CTTCCCCCCACGACTGGAAGACTTCTCCGTCCCCGAAGACTCCTCGGGTG
AGGGTACCTCTCAAAGAGATCCCGATCGTTTCATTAGATGGGAATGGCGC
TTCTGTCTGCTCGTGGAGAGCGTCCCTCCTCCACCCGCAGGTCAAGCGAA
AGAACAGATGAGGTTGTTTGTAGCTGGCCCAAATGCAGAGTATCTATTAG
GGCTGACTGCAGTTGAGTAAGTCATCTCGGCTCCCTCACATATCGACACT
AAGATCGCCGTGAGGTCGATTATCTAACCATAACTCTTCCTATGTCCATT
AGTCTAAGACAAAACCAAACCGATCTGAAAGAACTCCGAGAAAAGCTCTT
CATCTTATGGGGAGACCTCGAGGAGCGCAAAAGAGCGGCCCTACACGATG
GCAAACAGGACCTCGGCCCAGTTTCATGCAGGCCTTTCAATTGCTGCATT
CAAGAGTATGGTGTTCTTTGCAGACATCGTTCTGATACTGAGAACACCAA
CACTAATAATGAAGATGATGAGAATGGCTGTAGCCATGATGACTGCTTTG
GATGGGAGAGGCGCTTTTCTATGTTCCTTACTACTATT back to topCoding sequence (CDS) from alignment at ACJE01000008.1:1543511..1545548+ >ASPNIDRAFT_182791-T1 ID=ASPNIDRAFT_182791-T1|Name=ASPNIDRAFT_182791-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=7284bp|location=Sequence derived from alignment at ACJE01000008.1:1543511..1545548+ (Aspergillus niger ATCC 1015)
ATGTCAGGCGGCTATGCCTCCCGGTTCGTGGATGTGTCCACCGCACTCTC
TACGCAGGGCAAAGTAAGTGTCATTGGCGTCGTAGTCGACGTCTTCGGCG
GAATATGGAAGTCTAGAGGCTCGTCCAGCTGTATTACCTTCACCATCAAG
GACTCAGGTCTTGACAACGGACATACATGGGACGGGTTGAAAATCAAATA
TTTCAAAGACAATGAGAGCCATTTACCTCCCGTCCAACTACGCGACGTGA
TCCTGATACGAGATCTGTGGATAAGGAACTTCAAAGGAGACCCGTTGGGA
GTCGCTGCCCAGGACAGAGAAGTACCATGGGCAATCTTTCGCCTGGACCC
GGATCCCACGTCTAGCCCTGCGCCCCTTTGTGGCCCTACGCACTTTGAGC
CATCTCCTTCAGAGAAGATACATGCTTTGAATTTGTTGAATAGCCTCACT
GCAGTCGATGGTTTTCGCAAAGCTCCAGCACAAGATACTCCACGTGGCTC
CTATATTGTCCAGGCTGCAATTCCAAATTCCAAACCTTACCCGCACAAGA
GGCTTTCTCTTGTCAAGGATATTGTAGAGCGAAATTATGTTGACCTCGTG
GGGCAAATTGTCAAGGTCTATACCAACGACAGTGAAAAGGTCGTCCTCTA
TTTCACCGATTACACGGCCAACGATGGTCTCGAAGACCGCCAAATAAACG
ATGCCGGTGACAATGACTTTGGCACTGAAGGAGATATCTACGGTTACCAA
AAACGACCCAAGAAGAAATGGACAGGACCAGTTGGACGGATGACCCTCAC
AATCACACTCTGGGAACCCCATGCATCCTATGCGCGCCAACATCTGAAGG
ATAACGATCTCATCCAGCTATACAATGTGCATGTCAAGCGCAGTCGCATC
AATGGGATATTAGAAGCCAGTATCCACACAAACCGCACGAATCCAAATTC
AGTCAATGTACACACCCTGGATCGTCGCAAAGACACGTTTGTCGAACAAT
TTCTGCAGCGTAAGACGGAATACTGGAAAGCGAATCCTCGGAAGCGGGAA
CTCGAAAACGAAGGCCAGCAGGTTTCGAAGAAAAGCACCAAGAAACAGCG
AAAGAAAGCCGAAAAGGTGGAAGAAGGCCAAGTTCCCATAATAGCAGCAA
GCAGCAAGCGATATGCGCCAAATGAAAACAGCAGCCCGTCCGTCCCTACA
ATGTCCCTGGAAGCGATCCTTTCCAACAAACTTCATGACAACATCTCATA
TGACAACATACAGTACCGCTTCCCCTTTCAAAACTTCTGCTACCGAACCA
CAGTCCGTGTGGTCGATTTCTTCCCCCCACGACTGGAAGACTTCTCCGTC
CCCGAAGACTCCTCGGGTGAGGGTACCTCTCAAAGAGATCCCGATCGTTT
CATTAGATGGGAATGGCGCTTCTGTCTGCTCGTGGAGAGCGTCCCTCCTC
CACCCGCAGGTCAAGCGAAAGAACAGATGAGGTTGTTTGTAGCTGGCCCA
AATGCAGAGTATCTATTAGGGCTGACTGCAGTTGATCTAAGACAAAACCA
AACCGATCTGAAAGAACTCCGAGAAAAGCTCTTCATCTTATGGGGAGACC
TCGAGGAGCGCAAAAGAGCGGCCCTACACGATGGCAAACAGGACCTCGGC
CCAGTTTCATGCAGGCCTTTCAATTGCTGCATTCAAGAGTATGGTGTTCT
TTGCAGACATCGTTCTGATACTGAGAACACCAACACTAATAATGAAGATG
ATGAGAATGGCTGTAGCCATGATGACTGCTTTGGATGGGAGAGGCGCTTT
TCTATGTTCCTTACTACTATTATGTCAGGCGGCTATGCCTCCCGGTTCGT
GGATGTGTCCACCGCACTCTCTACGCAGGGCAAAGTAAGTGTCATTGGCG
TCGTAGTCGACGTCTTCGGCGGAATATGGAAGTCTAGAGGCTCGTCCAGC
TGTATTACCTTCACCATCAAGGACTCAGGTCTTGACAACGGACATACATG
GGACGGGTTGAAAATCAAATATTTCAAAGACAATGAGAGCCATTTACCTC
CCGTCCAACTACGCGACGTGATCCTGATACGAGATCTGTGGATAAGGAAC
TTCAAAGGAGACCCGTTGGGAGTCGCTGCCCAGGACAGAGAAGTACCATG
GGCAATCTTTCGCCTGGACCCGGATCCCACGTCTAGCCCTGCGCCCCTTT
GTGGCCCTACGCACTTTGAGCCATCTCCTTCAGAGAAGATACATGCTTTG
AATTTGTTGAATAGCCTCACTGCAGTCGATGGTTTTCGCAAAGCTCCAGC
ACAAGATACTCCACGTGGCTCCTATATTGTCCAGGCTGCAATTCCAAATT
CCAAACCTTACCCGCACAAGAGGCTTTCTCTTGTCAAGGATATTGTAGAG
CGAAATTATGTTGACCTCGTGGGGCAAATTGTCAAGGTCTATACCAACGA
CAGTGAAAAGGTCGTCCTCTATTTCACCGATTACACGGCCAACGATGGTC
TCGAAGACCGCCAAATAAACGATGCCGGTGACAATGACTTTGGCACTGAA
GGAGATATCTACGGTTACCAAAAACGACCCAAGAAGAAATGGACAGGACC
AGTTGGACGGATGACCCTCACAATCACACTCTGGGAACCCCATGCATCCT
ATGCGCGCCAACATCTGAAGGATAACGATCTCATCCAGCTATACAATGTG
CATGTCAAGCGCAGTCGCATCAATGGGATATTAGAAGCCAGTATCCACAC
AAACCGCACGAATCCAAATTCAGTCAATGTACACACCCTGGATCGTCGCA
AAGACACGTTTGTCGAACAATTTCTGCAGCGTAAGACGGAATACTGGAAA
GCGAATCCTCGGAAGCGGGAACTCGAAAACGAAGGCCAGCAGGTTTCGAA
GAAAAGCACCAAGAAACAGCGAAAGAAAGCCGAAAAGGTGGAAGAAGGCC
AAGTTCCCATAATAGCAGCAAGCAGCAAGCGATATGCGCCAAATGAAAAC
AGCAGCCCGTCCGTCCCTACAATGTCCCTGGAAGCGATCCTTTCCAACAA
ACTTCATGACAACATCTCATATGACAACATACAGTACCGCTTCCCCTTTC
AAAACTTCTGCTACCGAACCACAGTCCGTGTGGTCGATTTCTTCCCCCCA
CGACTGGAAGACTTCTCCGTCCCCGAAGACTCCTCGGGTGAGGGTACCTC
TCAAAGAGATCCCGATCGTTTCATTAGATGGGAATGGCGCTTCTGTCTGC
TCGTGGAGAGCGTCCCTCCTCCACCCGCAGGTCAAGCGAAAGAACAGATG
AGGTTGTTTGTAGCTGGCCCAAATGCAGAGTATCTATTAGGGCTGACTGC
AGTTGATCTAAGACAAAACCAAACCGATCTGAAAGAACTCCGAGAAAAGC
TCTTCATCTTATGGGGAGACCTCGAGGAGCGCAAAAGAGCGGCCCTACAC
GATGGCAAACAGGACCTCGGCCCAGTTTCATGCAGGCCTTTCAATTGCTG
CATTCAAGAGTATGGTGTTCTTTGCAGACATCGTTCTGATACTGAGAACA
CCAACACTAATAATGAAGATGATGAGAATGGCTGTAGCCATGATGACTGC
TTTGGATGGGAGAGGCGCTTTTCTATGTTCCTTACTACTATTATGTCAGG
CGGCTATGCCTCCCGGTTCGTGGATGTGTCCACCGCACTCTCTACGCAGG
GCAAAGTAAGTGTCATTGGCGTCGTAGTCGACGTCTTCGGCGGAATATGG
AAGTCTAGAGGCTCGTCCAGCTGTATTACCTTCACCATCAAGGACTCAGG
TCTTGACAACGGACATACATGGGACGGGTTGAAAATCAAATATTTCAAAG
ACAATGAGAGCCATTTACCTCCCGTCCAACTACGCGACGTGATCCTGATA
CGAGATCTGTGGATAAGGAACTTCAAAGGAGACCCGTTGGGAGTCGCTGC
CCAGGACAGAGAAGTACCATGGGCAATCTTTCGCCTGGACCCGGATCCCA
CGTCTAGCCCTGCGCCCCTTTGTGGCCCTACGCACTTTGAGCCATCTCCT
TCAGAGAAGATACATGCTTTGAATTTGTTGAATAGCCTCACTGCAGTCGA
TGGTTTTCGCAAAGCTCCAGCACAAGATACTCCACGTGGCTCCTATATTG
TCCAGGCTGCAATTCCAAATTCCAAACCTTACCCGCACAAGAGGCTTTCT
CTTGTCAAGGATATTGTAGAGCGAAATTATGTTGACCTCGTGGGGCAAAT
TGTCAAGGTCTATACCAACGACAGTGAAAAGGTCGTCCTCTATTTCACCG
ATTACACGGCCAACGATGGTCTCGAAGACCGCCAAATAAACGATGCCGGT
GACAATGACTTTGGCACTGAAGGAGATATCTACGGTTACCAAAAACGACC
CAAGAAGAAATGGACAGGACCAGTTGGACGGATGACCCTCACAATCACAC
TCTGGGAACCCCATGCATCCTATGCGCGCCAACATCTGAAGGATAACGAT
CTCATCCAGCTATACAATGTGCATGTCAAGCGCAGTCGCATCAATGGGAT
ATTAGAAGCCAGTATCCACACAAACCGCACGAATCCAAATTCAGTCAATG
TACACACCCTGGATCGTCGCAAAGACACGTTTGTCGAACAATTTCTGCAG
CGTAAGACGGAATACTGGAAAGCGAATCCTCGGAAGCGGGAACTCGAAAA
CGAAGGCCAGCAGGTTTCGAAGAAAAGCACCAAGAAACAGCGAAAGAAAG
CCGAAAAGGTGGAAGAAGGCCAAGTTCCCATAATAGCAGCAAGCAGCAAG
CGATATGCGCCAAATGAAAACAGCAGCCCGTCCGTCCCTACAATGTCCCT
GGAAGCGATCCTTTCCAACAAACTTCATGACAACATCTCATATGACAACA
TACAGTACCGCTTCCCCTTTCAAAACTTCTGCTACCGAACCACAGTCCGT
GTGGTCGATTTCTTCCCCCCACGACTGGAAGACTTCTCCGTCCCCGAAGA
CTCCTCGGGTGAGGGTACCTCTCAAAGAGATCCCGATCGTTTCATTAGAT
GGGAATGGCGCTTCTGTCTGCTCGTGGAGAGCGTCCCTCCTCCACCCGCA
GGTCAAGCGAAAGAACAGATGAGGTTGTTTGTAGCTGGCCCAAATGCAGA
GTATCTATTAGGGCTGACTGCAGTTGATCTAAGACAAAACCAAACCGATC
TGAAAGAACTCCGAGAAAAGCTCTTCATCTTATGGGGAGACCTCGAGGAG
CGCAAAAGAGCGGCCCTACACGATGGCAAACAGGACCTCGGCCCAGTTTC
ATGCAGGCCTTTCAATTGCTGCATTCAAGAGTATGGTGTTCTTTGCAGAC
ATCGTTCTGATACTGAGAACACCAACACTAATAATGAAGATGATGAGAAT
GGCTGTAGCCATGATGACTGCTTTGGATGGGAGAGGCGCTTTTCTATGTT
CCTTACTACTATTATGTCAGGCGGCTATGCCTCCCGGTTCGTGGATGTGT
CCACCGCACTCTCTACGCAGGGCAAAGTAAGTGTCATTGGCGTCGTAGTC
GACGTCTTCGGCGGAATATGGAAGTCTAGAGGCTCGTCCAGCTGTATTAC
CTTCACCATCAAGGACTCAGGTCTTGACAACGGACATACATGGGACGGGT
TGAAAATCAAATATTTCAAAGACAATGAGAGCCATTTACCTCCCGTCCAA
CTACGCGACGTGATCCTGATACGAGATCTGTGGATAAGGAACTTCAAAGG
AGACCCGTTGGGAGTCGCTGCCCAGGACAGAGAAGTACCATGGGCAATCT
TTCGCCTGGACCCGGATCCCACGTCTAGCCCTGCGCCCCTTTGTGGCCCT
ACGCACTTTGAGCCATCTCCTTCAGAGAAGATACATGCTTTGAATTTGTT
GAATAGCCTCACTGCAGTCGATGGTTTTCGCAAAGCTCCAGCACAAGATA
CTCCACGTGGCTCCTATATTGTCCAGGCTGCAATTCCAAATTCCAAACCT
TACCCGCACAAGAGGCTTTCTCTTGTCAAGGATATTGTAGAGCGAAATTA
TGTTGACCTCGTGGGGCAAATTGTCAAGGTCTATACCAACGACAGTGAAA
AGGTCGTCCTCTATTTCACCGATTACACGGCCAACGATGGTCTCGAAGAC
CGCCAAATAAACGATGCCGGTGACAATGACTTTGGCACTGAAGGAGATAT
CTACGGTTACCAAAAACGACCCAAGAAGAAATGGACAGGACCAGTTGGAC
GGATGACCCTCACAATCACACTCTGGGAACCCCATGCATCCTATGCGCGC
CAACATCTGAAGGATAACGATCTCATCCAGCTATACAATGTGCATGTCAA
GCGCAGTCGCATCAATGGGATATTAGAAGCCAGTATCCACACAAACCGCA
CGAATCCAAATTCAGTCAATGTACACACCCTGGATCGTCGCAAAGACACG
TTTGTCGAACAATTTCTGCAGCGTAAGACGGAATACTGGAAAGCGAATCC
TCGGAAGCGGGAACTCGAAAACGAAGGCCAGCAGGTTTCGAAGAAAAGCA
CCAAGAAACAGCGAAAGAAAGCCGAAAAGGTGGAAGAAGGCCAAGTTCCC
ATAATAGCAGCAAGCAGCAAGCGATATGCGCCAAATGAAAACAGCAGCCC
GTCCGTCCCTACAATGTCCCTGGAAGCGATCCTTTCCAACAAACTTCATG
ACAACATCTCATATGACAACATACAGTACCGCTTCCCCTTTCAAAACTTC
TGCTACCGAACCACAGTCCGTGTGGTCGATTTCTTCCCCCCACGACTGGA
AGACTTCTCCGTCCCCGAAGACTCCTCGGGTGAGGGTACCTCTCAAAGAG
ATCCCGATCGTTTCATTAGATGGGAATGGCGCTTCTGTCTGCTCGTGGAG
AGCGTCCCTCCTCCACCCGCAGGTCAAGCGAAAGAACAGATGAGGTTGTT
TGTAGCTGGCCCAAATGCAGAGTATCTATTAGGGCTGACTGCAGTTGATC
TAAGACAAAACCAAACCGATCTGAAAGAACTCCGAGAAAAGCTCTTCATC
TTATGGGGAGACCTCGAGGAGCGCAAAAGAGCGGCCCTACACGATGGCAA
ACAGGACCTCGGCCCAGTTTCATGCAGGCCTTTCAATTGCTGCATTCAAG
AGTATGGTGTTCTTTGCAGACATCGTTCTGATACTGAGAACACCAACACT
AATAATGAAGATGATGAGAATGGCTGTAGCCATGATGACTGCTTTGGATG
GGAGAGGCGCTTTTCTATGTTCCTTACTACTATT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000784 | nuclear chromosome, telomeric region |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000723 | telomere maintenance |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0043047 | single-stranded telomeric DNA binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR012340 |
| DBxref | InterPro:IPR032042 |
| DBxref | InterPro:IPR011564 |
| DBxref | PFAM:PF16686 |
| DBxref | PFAM:PF02765 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000008.1 | supercontig | ACJE01000008.1:1543511..1545548 + |
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