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ASPNIDRAFT_183031-T1, ASPNIDRAFT_183031-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_183031-T1
Unique NameASPNIDRAFT_183031-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:1350804..1351302-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_183031-T1 ID=ASPNIDRAFT_183031-T1|Name=ASPNIDRAFT_183031-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=499bp|location=Sequence derived from alignment at ACJE01000008.1:1350804..1351302- (Aspergillus niger ATCC 1015)
TTCAACCCTGTCAACCCCCGGCCTTTCCTCCAGGCTAGGTACGCACCCGG
TCCCTTGTCGCTTGATCGCCCCGCCGCAATCCCATCCTATAACTTCCAAT
TTCTATTGAAAAATATCCTCTAATTCAAATCGCAGAGTCGGTACCGAGCT
CATCATCCGTCTGAAGTGGGGCCAAACGGAATACAAGGGCAAGCTTGAGA
GCATCGATTCGTACATGAACGTGCTGCTCCGTGATACGGAAGAGTTCATT
GACGGAAAGAACACGGGAACATTGGGTCTGGTCCTGATTAGGTGCGTTTA
TTCGGTCGCCTGCTATCTCGGGGGCTGGGGTTTCCTGATCCCAGTGCTGG
GATCTGCGCATCCGTTACCCCTCTCCGGAGATACATTTGGACGCATATTG
GAAGGATATTTGCTAACGCAATGCGCTGATAGGTGTAACAACATCCTCTG
GATGGGCTCTGCGGACAGCGTGGAAATGACGGACCTGGGACTACGATAG
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Coding sequence (CDS) from alignment at ACJE01000008.1:1350804..1351302-

>ASPNIDRAFT_183031-T1 ID=ASPNIDRAFT_183031-T1|Name=ASPNIDRAFT_183031-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=729bp|location=Sequence derived from alignment at ACJE01000008.1:1350804..1351302- (Aspergillus niger ATCC 1015)
CGTGGAAATGACGGACCTGGGACTACGATAGAGTCGGTACCGAGCTCATC
ATCCGTCTGAAGTGGGGCCAAACGGAATACAAGGGCAAGCTTGAGAGCAT
CGATTCGTACATGAACGTGCTGCTCCGTGATACGGAAGAGTTCATTGACG
GAAAGAACACGGGAACATTGGGTCTGGTCCTGATTAGTTCAACCCTGTCA
ACCCCCGGCCTTTCCTCCAGGCTAGGTACGCACCCGGTCCCTTCGTGGAA
ATGACGGACCTGGGACTACGATAGAGTCGGTACCGAGCTCATCATCCGTC
TGAAGTGGGGCCAAACGGAATACAAGGGCAAGCTTGAGAGCATCGATTCG
TACATGAACGTGCTGCTCCGTGATACGGAAGAGTTCATTGACGGAAAGAA
CACGGGAACATTGGGTCTGGTCCTGATTAGTTCAACCCTGTCAACCCCCG
GCCTTTCCTCCAGGCTAGGTACGCACCCGGTCCCTTCGTGGAAATGACGG
ACCTGGGACTACGATAGAGTCGGTACCGAGCTCATCATCCGTCTGAAGTG
GGGCCAAACGGAATACAAGGGCAAGCTTGAGAGCATCGATTCGTACATGA
ACGTGCTGCTCCGTGATACGGAAGAGTTCATTGACGGAAAGAACACGGGA
ACATTGGGTCTGGTCCTGATTAGTTCAACCCTGTCAACCCCCGGCCTTTC
CTCCAGGCTAGGTACGCACCCGGTCCCTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005681spliceosomal complex
GO:0005732small nucleolar ribonucleoprotein complex
Vocabulary: Biological Process
TermDefinition
GO:0000387spliceosomal snRNP assembly
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_183031ASPNIDRAFT_183031Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_183031-T1ASPNIDRAFT_183031-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_183031-T1.cdsASPNIDRAFT_183031-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_183031-T1.exon3ASPNIDRAFT_183031-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_183031-T1.exon2ASPNIDRAFT_183031-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_183031-T1.exon1ASPNIDRAFT_183031-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR010920
DBxrefInterPro:IPR034100
DBxrefInterPro:IPR016487
DBxrefInterPro:IPR001163
DBxrefPFAM:PF01423
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:1350804..1351302 -
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