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ASPNIDRAFT_183088-T1, ASPNIDRAFT_183088-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_183088-T1
Unique NameASPNIDRAFT_183088-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:1095507..1096272-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_183088-T1 ID=ASPNIDRAFT_183088-T1|Name=ASPNIDRAFT_183088-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=766bp|location=Sequence derived from alignment at ACJE01000008.1:1095507..1096272- (Aspergillus niger ATCC 1015)
ATGCTTGCGGCAAGTTCCGCGATCCCCCCACCACCGCGTGGAGCTCTTTC
ACCCGAACGTCTGCAATGGATTAGAGAGGTGATCGGCAATCAGACTGAGA
ACGACAGCGTTTCGGACCTTGCTAAGCGGAGCACTGTCCTGTCTACCAGC
CAAGACGGAGTTGACAGCGCCGGATTCTACTACTCAGTGTACAATGACAA
CGGGGCCGATGTCGGATACACCGAATACCCCACGACCGGCCAGTTCGAAC
TTGGCTGGAGTGCTGAGGCGGAATTCCTCGCTGGAAAGGGCTTCAAGGGC
GGCAACCCACGGTAAGTAGCCCTTCACCGGGCAGAGCCCAAGAAGGCTGA
CAATTTTCCGGCTCAGCTCCTTGACCTGGGACGGTTATTTTACCGCCGAA
GGGGACTGGACTTTGGCCATTTATGGCTGGACCACGAACCCCGTCACCGA
GTGGTATATTGTGGAGACGCATGGAACTGGAACCCCAGGCAACGGGGACA
TCCTCGGCCAGGTTGATAGTGATGGCGGCGTCTACGATGTCTATAATCTT
CCCTATAGGAATGTTCCGGAGATCTACGGTGTCACCAACTTCGACCAGTA
CTGGTCGGTGCGTCGCACCCACCGCACCACCGGCACCGTCGACGTGAGCG
CCCATTTCCAGGGCTGGAAAAACTTGGGTCTCAACCCTGGCTCCCCAGTC
TTTCAGATGGTTACTCTGGAAGGATTTTCCGGCCAGGGGTACCTGGACTT
CACCGTTAGTGCATAG
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Coding sequence (CDS) from alignment at ACJE01000008.1:1095507..1096272-

>ASPNIDRAFT_183088-T1 ID=ASPNIDRAFT_183088-T1|Name=ASPNIDRAFT_183088-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1422bp|location=Sequence derived from alignment at ACJE01000008.1:1095507..1096272- (Aspergillus niger ATCC 1015)
CTCCTTGACCTGGGACGGTTATTTTACCGCCGAAGGGGACTGGACTTTGG
CCATTTATGGCTGGACCACGAACCCCGTCACCGAGTGGTATATTGTGGAG
ACGCATGGAACTGGAACCCCAGGCAACGGGGACATCCTCGGCCAGGTTGA
TAGTGATGGCGGCGTCTACGATGTCTATAATCTTCCCTATAGGAATGTTC
CGGAGATCTACGGTGTCACCAACTTCGACCAGTACTGGTCGGTGCGTCGC
ACCCACCGCACCACCGGCACCGTCGACGTGAGCGCCCATTTCCAGGGCTG
GAAAAACTTGGGTCTCAACCCTGGCTCCCCAGTCTTTCAGATGGTTACTC
TGGAAGGATTTTCCGGCCAGGGGTACCTGGACTTCACCGTTAGTGCATAG
ATGCTTGCGGCAAGTTCCGCGATCCCCCCACCACCGCGTGGAGCTCTTTC
ACCCGAACGTCTGCAATGGATTAGAGAGGTGATCGGCAATCAGACTGAGA
ACGACAGCGTTTCGGACCTTGCTAAGCGGAGCACTGTCCTGTCTACCAGC
CAAGACGGAGTTGACAGCGCCGGATTCTACTACTCAGTGTACAATGACAA
CGGGGCCGATGTCGGATACACCGAATACCCCACGACCGGCCAGTTCGAAC
TTGGCTGGAGTGCTGAGGCGGAATTCCTCGCTGGAAAGGGCTTCAAGGGC
GGCAACCCACGCTCCTTGACCTGGGACGGTTATTTTACCGCCGAAGGGGA
CTGGACTTTGGCCATTTATGGCTGGACCACGAACCCCGTCACCGAGTGGT
ATATTGTGGAGACGCATGGAACTGGAACCCCAGGCAACGGGGACATCCTC
GGCCAGGTTGATAGTGATGGCGGCGTCTACGATGTCTATAATCTTCCCTA
TAGGAATGTTCCGGAGATCTACGGTGTCACCAACTTCGACCAGTACTGGT
CGGTGCGTCGCACCCACCGCACCACCGGCACCGTCGACGTGAGCGCCCAT
TTCCAGGGCTGGAAAAACTTGGGTCTCAACCCTGGCTCCCCAGTCTTTCA
GATGGTTACTCTGGAAGGATTTTCCGGCCAGGGGTACCTGGACTTCACCG
TTAGTGCATAGATGCTTGCGGCAAGTTCCGCGATCCCCCCACCACCGCGT
GGAGCTCTTTCACCCGAACGTCTGCAATGGATTAGAGAGGTGATCGGCAA
TCAGACTGAGAACGACAGCGTTTCGGACCTTGCTAAGCGGAGCACTGTCC
TGTCTACCAGCCAAGACGGAGTTGACAGCGCCGGATTCTACTACTCAGTG
TACAATGACAACGGGGCCGATGTCGGATACACCGAATACCCCACGACCGG
CCAGTTCGAACTTGGCTGGAGTGCTGAGGCGGAATTCCTCGCTGGAAAGG
GCTTCAAGGGCGGCAACCCACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_183088ASPNIDRAFT_183088Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_183088-T1ASPNIDRAFT_183088-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_183088-T1.cdsASPNIDRAFT_183088-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_183088-T1.exon2ASPNIDRAFT_183088-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_183088-T1.exon1ASPNIDRAFT_183088-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteCAZy:GH11
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR013319
DBxrefInterPro:IPR033123
DBxrefInterPro:IPR001137
DBxrefPFAM:PF00457
Productxylanase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:1095507..1096272 -
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