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ASPNIDRAFT_183753-T1, ASPNIDRAFT_183753-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_183753-T1
Unique NameASPNIDRAFT_183753-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:1395835..1396963+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_183753-T1 ID=ASPNIDRAFT_183753-T1|Name=ASPNIDRAFT_183753-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1129bp|location=Sequence derived from alignment at ACJE01000013.1:1395835..1396963+ (Aspergillus niger ATCC 1015)
ATGGGTTCGACTTCGACCGTCGCAGACACCCGCTTCAAGCTGAACACCGG
GGCTGAGATCCCTGCTCTCGGACTCGGTATGATACATCTTCAGATAGTAA
CCACAAGGATATTCTGGCTAACGTCTGTGCAGGAACCTGGCAGTCAGGCC
CTGGAGAGGTCGAAAAGGCCGTGGCACATGCCATCTCCGTTGGATACAGA
CACATTGATACCGCTTTTGCTTACGGAAACGAAGGAGAAGTCGGCAAGGG
TATCAAGGCAGCCATCGAGTCTGGAGTTGTCAAGCGAGAGGACCTCTTTG
TCACAACTAAGCTCTGGAGCACATGGCACTACCGAGTGGAACAGGCTCTG
GACCAGAGCTTGAAGAACTTGGGGCTGGACTATGTTGATCTCTACCTGGT
CCACTGGCCGGTGGCTATGAACCCTAATGGTGAGTCCTCCACTAATTTAG
ACTCAAGGCGATGCGCATGTTGACATTACAAAGGAAACCACCCCAATATT
CCCACCCTTCCCGACGGTTCCCGCGACCTGCACCTCAACCACTCCCATAT
CAACACTTGGAAGGATATGGAGAAGCTTGTCGGTAGCGGAAAGACCAAGG
CCATTGGTGTTTGCAACTACAGCAGGCCCTACCTTGAGGAGCTCCTCGCC
CAAGCCACCGTGGTCCCGGCTGTCAACCAGATTGAGAACCACCCCTGCCT
TCCCCAGCAGGAGGCGGTCGACTTCTGCAAGGAGAAGGGCATTCACATCA
CGGCATACAGCCCTCTCGGCAGCACGGGCAGTCCGCTGCTGACAGCAGAG
CCCATTGTCGAGGTTGCGAAGAAGAAGGGTGTCGACCCAGCCACGGTCCT
GCTGAGCTGGCACAGTACGTATCTTCCATGCCGAATAATGCGAGAATTAT
CACTAACTGCATCCTCCGTGTAGTCAGCCGTGGCTCTTCCGTCCTTGCCA
AGTCTGTGAACCCCTCTCGGATTGAGGGCAACCGCAACCTGGTGGCATTG
GATGATGCTGATATGGCTACCATTGCCAAATACACGAATGACCTGGCCTC
GAAGAACGCCTTTCAGCGTTTTGTTTTCCCTCCTTTCAAGCTTGACTTCG
GATTCCCGGACAAGATCGGCCGCGTATAA
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Coding sequence (CDS) from alignment at ACJE01000013.1:1395835..1396963+

>ASPNIDRAFT_183753-T1 ID=ASPNIDRAFT_183753-T1|Name=ASPNIDRAFT_183753-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3840bp|location=Sequence derived from alignment at ACJE01000013.1:1395835..1396963+ (Aspergillus niger ATCC 1015)
ATGGGTTCGACTTCGACCGTCGCAGACACCCGCTTCAAGCTGAACACCGG
GGCTGAGATCCCTGCTCTCGGACTCGGAACCTGGCAGTCAGGCCCTGGAG
AGGTCGAAAAGGCCGTGGCACATGCCATCTCCGTTGGATACAGACACATT
GATACCGCTTTTGCTTACGGAAACGAAGGAGAAGTCGGCAAGGGTATCAA
GGCAGCCATCGAGTCTGGAGTTGTCAAGCGAGAGGACCTCTTTGTCACAA
CTAAGCTCTGGAGCACATGGCACTACCGAGTGGAACAGGCTCTGGACCAG
AGCTTGAAGAACTTGGGGCTGGACTATGTTGATCTCTACCTGGTCCACTG
GCCGGTGGCTATGAACCCTAATGGAAACCACCCCAATATTCCCACCCTTC
CCGACGGTTCCCGCGACCTGCACCTCAACCACTCCCATATCAACACTTGG
AAGGATATGGAGAAGCTTGTCGGTAGCGGAAAGACCAAGGCCATTGGTGT
TTGCAACTACAGCAGGCCCTACCTTGAGGAGCTCCTCGCCCAAGCCACCG
TGGTCCCGGCTGTCAACCAGATTGAGAACCACCCCTGCCTTCCCCAGCAG
GAGGCGGTCGACTTCTGCAAGGAGAAGGGCATTCACATCACGGCATACAG
CCCTCTCGGCAGCACGGGCAGTCCGCTGCTGACAGCAGAGCCCATTGTCG
AGGTTGCGAAGAAGAAGGGTGTCGACCCAGCCACGGTCCTGCTGAGCTGG
CACATCAGCCGTGGCTCTTCCGTCCTTGCCAAGTCTGTGAACCCCTCTCG
GATTGAGGGCAACCGCAACCTGGTGGCATTGGATGATGCTGATATGGCTA
CCATTGCCAAATACACGAATGACCTGGCCTCGAAGAACGCCTTTCAGCGT
TTTGTTTTCCCTCCTTTCAAGCTTGACTTCGGATTCCCGGACAAGATCGG
CCGCGTATAAATGGGTTCGACTTCGACCGTCGCAGACACCCGCTTCAAGC
TGAACACCGGGGCTGAGATCCCTGCTCTCGGACTCGGAACCTGGCAGTCA
GGCCCTGGAGAGGTCGAAAAGGCCGTGGCACATGCCATCTCCGTTGGATA
CAGACACATTGATACCGCTTTTGCTTACGGAAACGAAGGAGAAGTCGGCA
AGGGTATCAAGGCAGCCATCGAGTCTGGAGTTGTCAAGCGAGAGGACCTC
TTTGTCACAACTAAGCTCTGGAGCACATGGCACTACCGAGTGGAACAGGC
TCTGGACCAGAGCTTGAAGAACTTGGGGCTGGACTATGTTGATCTCTACC
TGGTCCACTGGCCGGTGGCTATGAACCCTAATGGAAACCACCCCAATATT
CCCACCCTTCCCGACGGTTCCCGCGACCTGCACCTCAACCACTCCCATAT
CAACACTTGGAAGGATATGGAGAAGCTTGTCGGTAGCGGAAAGACCAAGG
CCATTGGTGTTTGCAACTACAGCAGGCCCTACCTTGAGGAGCTCCTCGCC
CAAGCCACCGTGGTCCCGGCTGTCAACCAGATTGAGAACCACCCCTGCCT
TCCCCAGCAGGAGGCGGTCGACTTCTGCAAGGAGAAGGGCATTCACATCA
CGGCATACAGCCCTCTCGGCAGCACGGGCAGTCCGCTGCTGACAGCAGAG
CCCATTGTCGAGGTTGCGAAGAAGAAGGGTGTCGACCCAGCCACGGTCCT
GCTGAGCTGGCACATCAGCCGTGGCTCTTCCGTCCTTGCCAAGTCTGTGA
ACCCCTCTCGGATTGAGGGCAACCGCAACCTGGTGGCATTGGATGATGCT
GATATGGCTACCATTGCCAAATACACGAATGACCTGGCCTCGAAGAACGC
CTTTCAGCGTTTTGTTTTCCCTCCTTTCAAGCTTGACTTCGGATTCCCGG
ACAAGATCGGCCGCGTATAAATGGGTTCGACTTCGACCGTCGCAGACACC
CGCTTCAAGCTGAACACCGGGGCTGAGATCCCTGCTCTCGGACTCGGAAC
CTGGCAGTCAGGCCCTGGAGAGGTCGAAAAGGCCGTGGCACATGCCATCT
CCGTTGGATACAGACACATTGATACCGCTTTTGCTTACGGAAACGAAGGA
GAAGTCGGCAAGGGTATCAAGGCAGCCATCGAGTCTGGAGTTGTCAAGCG
AGAGGACCTCTTTGTCACAACTAAGCTCTGGAGCACATGGCACTACCGAG
TGGAACAGGCTCTGGACCAGAGCTTGAAGAACTTGGGGCTGGACTATGTT
GATCTCTACCTGGTCCACTGGCCGGTGGCTATGAACCCTAATGGAAACCA
CCCCAATATTCCCACCCTTCCCGACGGTTCCCGCGACCTGCACCTCAACC
ACTCCCATATCAACACTTGGAAGGATATGGAGAAGCTTGTCGGTAGCGGA
AAGACCAAGGCCATTGGTGTTTGCAACTACAGCAGGCCCTACCTTGAGGA
GCTCCTCGCCCAAGCCACCGTGGTCCCGGCTGTCAACCAGATTGAGAACC
ACCCCTGCCTTCCCCAGCAGGAGGCGGTCGACTTCTGCAAGGAGAAGGGC
ATTCACATCACGGCATACAGCCCTCTCGGCAGCACGGGCAGTCCGCTGCT
GACAGCAGAGCCCATTGTCGAGGTTGCGAAGAAGAAGGGTGTCGACCCAG
CCACGGTCCTGCTGAGCTGGCACATCAGCCGTGGCTCTTCCGTCCTTGCC
AAGTCTGTGAACCCCTCTCGGATTGAGGGCAACCGCAACCTGGTGGCATT
GGATGATGCTGATATGGCTACCATTGCCAAATACACGAATGACCTGGCCT
CGAAGAACGCCTTTCAGCGTTTTGTTTTCCCTCCTTTCAAGCTTGACTTC
GGATTCCCGGACAAGATCGGCCGCGTATAAATGGGTTCGACTTCGACCGT
CGCAGACACCCGCTTCAAGCTGAACACCGGGGCTGAGATCCCTGCTCTCG
GACTCGGAACCTGGCAGTCAGGCCCTGGAGAGGTCGAAAAGGCCGTGGCA
CATGCCATCTCCGTTGGATACAGACACATTGATACCGCTTTTGCTTACGG
AAACGAAGGAGAAGTCGGCAAGGGTATCAAGGCAGCCATCGAGTCTGGAG
TTGTCAAGCGAGAGGACCTCTTTGTCACAACTAAGCTCTGGAGCACATGG
CACTACCGAGTGGAACAGGCTCTGGACCAGAGCTTGAAGAACTTGGGGCT
GGACTATGTTGATCTCTACCTGGTCCACTGGCCGGTGGCTATGAACCCTA
ATGGAAACCACCCCAATATTCCCACCCTTCCCGACGGTTCCCGCGACCTG
CACCTCAACCACTCCCATATCAACACTTGGAAGGATATGGAGAAGCTTGT
CGGTAGCGGAAAGACCAAGGCCATTGGTGTTTGCAACTACAGCAGGCCCT
ACCTTGAGGAGCTCCTCGCCCAAGCCACCGTGGTCCCGGCTGTCAACCAG
ATTGAGAACCACCCCTGCCTTCCCCAGCAGGAGGCGGTCGACTTCTGCAA
GGAGAAGGGCATTCACATCACGGCATACAGCCCTCTCGGCAGCACGGGCA
GTCCGCTGCTGACAGCAGAGCCCATTGTCGAGGTTGCGAAGAAGAAGGGT
GTCGACCCAGCCACGGTCCTGCTGAGCTGGCACATCAGCCGTGGCTCTTC
CGTCCTTGCCAAGTCTGTGAACCCCTCTCGGATTGAGGGCAACCGCAACC
TGGTGGCATTGGATGATGCTGATATGGCTACCATTGCCAAATACACGAAT
GACCTGGCCTCGAAGAACGCCTTTCAGCGTTTTGTTTTCCCTCCTTTCAA
GCTTGACTTCGGATTCCCGGACAAGATCGGCCGCGTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GAR1ASPNIDRAFT_183753Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_183753-T1.exon1ASPNIDRAFT_183753-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_183753-T1.exon2ASPNIDRAFT_183753-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_183753-T1.exon3ASPNIDRAFT_183753-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_183753-T1.exon4ASPNIDRAFT_183753-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_183753-T1.cdsASPNIDRAFT_183753-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_183753-T1ASPNIDRAFT_183753-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018170
DBxrefInterPro:IPR023210
DBxrefInterPro:IPR036812
DBxrefInterPro:IPR020471
DBxrefPFAM:PF00248
ProductH/ACA snoRNP pseudouridylase subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:1395835..1396963 +
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