You are here

Home

ASPNIDRAFT_184195-T1, ASPNIDRAFT_184195-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_184195-T1
Unique NameASPNIDRAFT_184195-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:905828..907082+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_184195-T1 ID=ASPNIDRAFT_184195-T1|Name=ASPNIDRAFT_184195-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1255bp|location=Sequence derived from alignment at ACJE01000013.1:905828..907082+ (Aspergillus niger ATCC 1015)
ATGCTGCCATCCCTGCTTTCCGTTTTATTCTTCCTGCTCTATGCAGTGAA
CGCTGTTCCACTGGCGCCCCGGGCGAGTGCACTCGCCGGGATCGACACCA
AGTCCTTCTCTAAGACCAAAGATTATCCCCTTCCCAACCTGGGCAACATC
GTTGCTCATGATCCTAATGTCATTCAGCATGATGGCTATTTCTACTTGTA
CAAAGGTGGTGTGCACATTCCGATTCACAGAGCCCGCTCCCTCAGTGGGC
CTTGGGAACAGGTCGGGACCGTCCTGGACGACTCCAGCGTGATTCCAAAA
CAGAACCGCTCTCGTCCTTGGGCCCCTACGACCATTCAGCACGACAACCG
CTTCTACTGCTTCTACGCGATCAGCGAGAACGGCAGCCGCGACAGCGCCA
TTGGAGTCGCCTCTTCGGATACTCCCGTCGGTGGAAACTGGACGGACCAT
GGCGCTGTCGTCAATACCGGCAAGGGAGACCTGTCGGACATCTATCCTTA
CTCGGTATCCAATGCGATTGACGGCGCATTCATCACCGATCAAGAGACCG
GACAGTCTCACCTGCTTTACGGGAGCTATTGGCATGGCATTTTCTCGGTG
CCATTGGCCGATGATCTCCTTTCCGTCAAAACCCCGAAGACCCCGAACGC
GACCAACCTGGCCTACATCCCAGATGCCAAGTCCAAGCCTATCGAGGGCT
CTTTCATGACTTACAAGGCGCCTTACTACTACCTGTGGTTCAGTCACGGC
AAATGTTGTCACTTTGATATTCACGCTTTTCCGCCCATGGGAGACGAGTA
CGTGCACATGATCTTCTATTCGAGAACTTGGTAGCTAACATTTACAACAG
GTACAACATCCGGGTCGGCAGATCTAAGAGTGCGACAGGTCCTTTCGTGG
ACAAGGATGGCCATGATACCCTCAAGGGAGGCGGTACCATCGTCTACGGC
TCCAACCATGGAATTGTCTATGCCCCGGGTGGTGTGGGCGTGTTGATCAA
CAACGGCAGCGAAGCCGATGTCTTGTATTACCATTATCGTACGTTTACAG
TCCACTGTTGTGGGGAAGTCAGCTAACAGAGCTTGCAGTCAACACTACAT
CTGGTTTCGCACAGGGCGTGAGTCTAGCCTTAACTATCCATTGACAGGAT
GATACTAACGCAATACAGGACGCGCACTTGGGATGGAACTATCTGCACTA
TGTAAATGGATGGCCAGTGGCTGTCGAGGGGTATGTTAATGCCAACGGCA
AATAA
back to top

Coding sequence (CDS) from alignment at ACJE01000013.1:905828..907082+

>ASPNIDRAFT_184195-T1 ID=ASPNIDRAFT_184195-T1|Name=ASPNIDRAFT_184195-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4488bp|location=Sequence derived from alignment at ACJE01000013.1:905828..907082+ (Aspergillus niger ATCC 1015)
ATGCTGCCATCCCTGCTTTCCGTTTTATTCTTCCTGCTCTATGCAGTGAA
CGCTGTTCCACTGGCGCCCCGGGCGAGTGCACTCGCCGGGATCGACACCA
AGTCCTTCTCTAAGACCAAAGATTATCCCCTTCCCAACCTGGGCAACATC
GTTGCTCATGATCCTAATGTCATTCAGCATGATGGCTATTTCTACTTGTA
CAAAGGTGGTGTGCACATTCCGATTCACAGAGCCCGCTCCCTCAGTGGGC
CTTGGGAACAGGTCGGGACCGTCCTGGACGACTCCAGCGTGATTCCAAAA
CAGAACCGCTCTCGTCCTTGGGCCCCTACGACCATTCAGCACGACAACCG
CTTCTACTGCTTCTACGCGATCAGCGAGAACGGCAGCCGCGACAGCGCCA
TTGGAGTCGCCTCTTCGGATACTCCCGTCGGTGGAAACTGGACGGACCAT
GGCGCTGTCGTCAATACCGGCAAGGGAGACCTGTCGGACATCTATCCTTA
CTCGGTATCCAATGCGATTGACGGCGCATTCATCACCGATCAAGAGACCG
GACAGTCTCACCTGCTTTACGGGAGCTATTGGCATGGCATTTTCTCGGTG
CCATTGGCCGATGATCTCCTTTCCGTCAAAACCCCGAAGACCCCGAACGC
GACCAACCTGGCCTACATCCCAGATGCCAAGTCCAAGCCTATCGAGGGCT
CTTTCATGACTTACAAGGCGCCTTACTACTACCTGTGGTTCAGTCACGGC
AAATGTTGTCACTTTGATATTCACGCTTTTCCGCCCATGGGAGACGAGTA
CAACATCCGGGTCGGCAGATCTAAGAGTGCGACAGGTCCTTTCGTGGACA
AGGATGGCCATGATACCCTCAAGGGAGGCGGTACCATCGTCTACGGCTCC
AACCATGGAATTGTCTATGCCCCGGGTGGTGTGGGCGTGTTGATCAACAA
CGGCAGCGAAGCCGATGTCTTGTATTACCATTATCTCAACACTACATCTG
GTTTCGCACAGGGCGATGATACTAACGCAATACAGGACGCGCACTTGGGA
TGGAACTATCTGCACTATGTAAATGGATGGCCAGTGGCTGTCGAGGGGTA
TGTTAATGCCAACGGCAAATAAATGCTGCCATCCCTGCTTTCCGTTTTAT
TCTTCCTGCTCTATGCAGTGAACGCTGTTCCACTGGCGCCCCGGGCGAGT
GCACTCGCCGGGATCGACACCAAGTCCTTCTCTAAGACCAAAGATTATCC
CCTTCCCAACCTGGGCAACATCGTTGCTCATGATCCTAATGTCATTCAGC
ATGATGGCTATTTCTACTTGTACAAAGGTGGTGTGCACATTCCGATTCAC
AGAGCCCGCTCCCTCAGTGGGCCTTGGGAACAGGTCGGGACCGTCCTGGA
CGACTCCAGCGTGATTCCAAAACAGAACCGCTCTCGTCCTTGGGCCCCTA
CGACCATTCAGCACGACAACCGCTTCTACTGCTTCTACGCGATCAGCGAG
AACGGCAGCCGCGACAGCGCCATTGGAGTCGCCTCTTCGGATACTCCCGT
CGGTGGAAACTGGACGGACCATGGCGCTGTCGTCAATACCGGCAAGGGAG
ACCTGTCGGACATCTATCCTTACTCGGTATCCAATGCGATTGACGGCGCA
TTCATCACCGATCAAGAGACCGGACAGTCTCACCTGCTTTACGGGAGCTA
TTGGCATGGCATTTTCTCGGTGCCATTGGCCGATGATCTCCTTTCCGTCA
AAACCCCGAAGACCCCGAACGCGACCAACCTGGCCTACATCCCAGATGCC
AAGTCCAAGCCTATCGAGGGCTCTTTCATGACTTACAAGGCGCCTTACTA
CTACCTGTGGTTCAGTCACGGCAAATGTTGTCACTTTGATATTCACGCTT
TTCCGCCCATGGGAGACGAGTACAACATCCGGGTCGGCAGATCTAAGAGT
GCGACAGGTCCTTTCGTGGACAAGGATGGCCATGATACCCTCAAGGGAGG
CGGTACCATCGTCTACGGCTCCAACCATGGAATTGTCTATGCCCCGGGTG
GTGTGGGCGTGTTGATCAACAACGGCAGCGAAGCCGATGTCTTGTATTAC
CATTATCTCAACACTACATCTGGTTTCGCACAGGGCGATGATACTAACGC
AATACAGGACGCGCACTTGGGATGGAACTATCTGCACTATGTAAATGGAT
GGCCAGTGGCTGTCGAGGGGTATGTTAATGCCAACGGCAAATAAATGCTG
CCATCCCTGCTTTCCGTTTTATTCTTCCTGCTCTATGCAGTGAACGCTGT
TCCACTGGCGCCCCGGGCGAGTGCACTCGCCGGGATCGACACCAAGTCCT
TCTCTAAGACCAAAGATTATCCCCTTCCCAACCTGGGCAACATCGTTGCT
CATGATCCTAATGTCATTCAGCATGATGGCTATTTCTACTTGTACAAAGG
TGGTGTGCACATTCCGATTCACAGAGCCCGCTCCCTCAGTGGGCCTTGGG
AACAGGTCGGGACCGTCCTGGACGACTCCAGCGTGATTCCAAAACAGAAC
CGCTCTCGTCCTTGGGCCCCTACGACCATTCAGCACGACAACCGCTTCTA
CTGCTTCTACGCGATCAGCGAGAACGGCAGCCGCGACAGCGCCATTGGAG
TCGCCTCTTCGGATACTCCCGTCGGTGGAAACTGGACGGACCATGGCGCT
GTCGTCAATACCGGCAAGGGAGACCTGTCGGACATCTATCCTTACTCGGT
ATCCAATGCGATTGACGGCGCATTCATCACCGATCAAGAGACCGGACAGT
CTCACCTGCTTTACGGGAGCTATTGGCATGGCATTTTCTCGGTGCCATTG
GCCGATGATCTCCTTTCCGTCAAAACCCCGAAGACCCCGAACGCGACCAA
CCTGGCCTACATCCCAGATGCCAAGTCCAAGCCTATCGAGGGCTCTTTCA
TGACTTACAAGGCGCCTTACTACTACCTGTGGTTCAGTCACGGCAAATGT
TGTCACTTTGATATTCACGCTTTTCCGCCCATGGGAGACGAGTACAACAT
CCGGGTCGGCAGATCTAAGAGTGCGACAGGTCCTTTCGTGGACAAGGATG
GCCATGATACCCTCAAGGGAGGCGGTACCATCGTCTACGGCTCCAACCAT
GGAATTGTCTATGCCCCGGGTGGTGTGGGCGTGTTGATCAACAACGGCAG
CGAAGCCGATGTCTTGTATTACCATTATCTCAACACTACATCTGGTTTCG
CACAGGGCGATGATACTAACGCAATACAGGACGCGCACTTGGGATGGAAC
TATCTGCACTATGTAAATGGATGGCCAGTGGCTGTCGAGGGGTATGTTAA
TGCCAACGGCAAATAAATGCTGCCATCCCTGCTTTCCGTTTTATTCTTCC
TGCTCTATGCAGTGAACGCTGTTCCACTGGCGCCCCGGGCGAGTGCACTC
GCCGGGATCGACACCAAGTCCTTCTCTAAGACCAAAGATTATCCCCTTCC
CAACCTGGGCAACATCGTTGCTCATGATCCTAATGTCATTCAGCATGATG
GCTATTTCTACTTGTACAAAGGTGGTGTGCACATTCCGATTCACAGAGCC
CGCTCCCTCAGTGGGCCTTGGGAACAGGTCGGGACCGTCCTGGACGACTC
CAGCGTGATTCCAAAACAGAACCGCTCTCGTCCTTGGGCCCCTACGACCA
TTCAGCACGACAACCGCTTCTACTGCTTCTACGCGATCAGCGAGAACGGC
AGCCGCGACAGCGCCATTGGAGTCGCCTCTTCGGATACTCCCGTCGGTGG
AAACTGGACGGACCATGGCGCTGTCGTCAATACCGGCAAGGGAGACCTGT
CGGACATCTATCCTTACTCGGTATCCAATGCGATTGACGGCGCATTCATC
ACCGATCAAGAGACCGGACAGTCTCACCTGCTTTACGGGAGCTATTGGCA
TGGCATTTTCTCGGTGCCATTGGCCGATGATCTCCTTTCCGTCAAAACCC
CGAAGACCCCGAACGCGACCAACCTGGCCTACATCCCAGATGCCAAGTCC
AAGCCTATCGAGGGCTCTTTCATGACTTACAAGGCGCCTTACTACTACCT
GTGGTTCAGTCACGGCAAATGTTGTCACTTTGATATTCACGCTTTTCCGC
CCATGGGAGACGAGTACAACATCCGGGTCGGCAGATCTAAGAGTGCGACA
GGTCCTTTCGTGGACAAGGATGGCCATGATACCCTCAAGGGAGGCGGTAC
CATCGTCTACGGCTCCAACCATGGAATTGTCTATGCCCCGGGTGGTGTGG
GCGTGTTGATCAACAACGGCAGCGAAGCCGATGTCTTGTATTACCATTAT
CTCAACACTACATCTGGTTTCGCACAGGGCGATGATACTAACGCAATACA
GGACGCGCACTTGGGATGGAACTATCTGCACTATGTAAATGGATGGCCAG
TGGCTGTCGAGGGGTATGTTAATGCCAACGGCAAATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046558arabinan endo-1,5-alpha-L-arabinosidase activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_184195ASPNIDRAFT_184195Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_184195-T1.exon1ASPNIDRAFT_184195-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_184195-T1.exon2ASPNIDRAFT_184195-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_184195-T1.exon3ASPNIDRAFT_184195-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_184195-T1.exon4ASPNIDRAFT_184195-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_184195-T1.cdsASPNIDRAFT_184195-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_184195-T1ASPNIDRAFT_184195-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH43_30
NoteCAZy:GH43_7
NoteCAZy:GH43_8
NoteCAZy:GH43_4
NoteCAZy:GH43_3
NoteCAZy:GH43
NoteCAZy:GH43_5
NoteCAZy:GH43_6
DBxrefInterPro:IPR016840
DBxrefInterPro:IPR023296
DBxrefInterPro:IPR006710
DBxrefPFAM:PF04616
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:905828..907082 +
Powered by Drupal