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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000013.1:1731620..1732439+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_184211-T1 ID=ASPNIDRAFT_184211-T1|Name=ASPNIDRAFT_184211-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=820bp|location=Sequence derived from alignment at ACJE01000013.1:1731620..1732439+ (Aspergillus niger ATCC 1015)
ATGACACTCTCTGGCCGTGTGGTCGTCGTCACTGGCGCCTCCAAGGGCAT
CGGGAAAGAAATCGCCCTGCGAGCTGCTGCCGAAGGTGCCAATGTCGTCA
TCAATTACCTGTCGGATATCAAAGCTGCAAATGCCCTGGTTATGCAATTA
GGACACGACCGTGCTCTGGCAGTGCGGGCTGATACTTCCAATATCAACGA
GGTGGACAGCTTAATTGAGGCCACTGTGTCTCGCTTCGGAAAAATCGACG
TCCTAATTCCCAACGCAGCTTACGTTCCGGATCGAACCCTGCAGAACGTC
CCCGAAGAAGAATTTGACCGCGCCTTCGCGGTCAACGTCAAAGGACCTTG
CTTCCTAGTACAGGTGCGCTATTCCATTACACCGACCGTATTGCCTGGGG
TGAGTGTGTCGGGGAGCAAAAAGCCGTGCTGACGGTTCTCAGAGAGCACT
ACCTCACATGACGTCCGGTGGCACGATTATTTTTATCTCCACTGACATGA
CCGACGCGTCCACTGTGATGCCTCAATTCCTTCTCTATGTGTCGACCAAG
GCGGCATTAAATCAAATGGTTAAGGTGCTTGCACGCGACCTTGCCGCTAC
GGGTATCCGAGTGAATGCGGTCTCTCCGGGTGCAACAAGCACCGAGTCAT
TCCACAAGGCTATGGATGAGAACAAGGCCAAGATGCTTGCAAGTCACCAT
CCCTTCAACCGCATTGGGCGCGCGGACGAGATTGCCGCAGCCGTGAGTCT
CCTGTGGAGGAAGGACAGCGGCTGGATCACTGGCCAAGTTCTGCGAGTGA
ACGGGGGCAGTGTTGTCTGA back to topCoding sequence (CDS) from alignment at ACJE01000013.1:1731620..1732439+ >ASPNIDRAFT_184211-T1 ID=ASPNIDRAFT_184211-T1|Name=ASPNIDRAFT_184211-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1566bp|location=Sequence derived from alignment at ACJE01000013.1:1731620..1732439+ (Aspergillus niger ATCC 1015)
ATGACACTCTCTGGCCGTGTGGTCGTCGTCACTGGCGCCTCCAAGGGCAT
CGGGAAAGAAATCGCCCTGCGAGCTGCTGCCGAAGGTGCCAATGTCGTCA
TCAATTACCTGTCGGATATCAAAGCTGCAAATGCCCTGGTTATGCAATTA
GGACACGACCGTGCTCTGGCAGTGCGGGCTGATACTTCCAATATCAACGA
GGTGGACAGCTTAATTGAGGCCACTGTGTCTCGCTTCGGAAAAATCGACG
TCCTAATTCCCAACGCAGCTTACGTTCCGGATCGAACCCTGCAGAACGTC
CCCGAAGAAGAATTTGACCGCGCCTTCGCGGTCAACGTCAAAGGACCTTG
CTTCCTAGTACAGGTGCGCTATTCCATTACACCGACCGTATTGCCTGGGG
TGAGTAGAGCACTACCTCACATGACGTCCGGTGGCACGATTATTTTTATC
TCCACTGACATGACCGACGCGTCCACTGTGATGCCTCAATTCCTTCTCTA
TGTGTCGACCAAGGCGGCATTAAATCAAATGGTTAAGGTGCTTGCACGCG
ACCTTGCCGCTACGGGTATCCGAGTGAATGCGGTCTCTCCGGGTGCAACA
AGCACCGAGTCATTCCACAAGGCTATGGATGAGAACAAGGCCAAGATGCT
TGCAAGTCACCATCCCTTCAACCGCATTGGGCGCGCGGACGAGATTGCCG
CAGCCGTGAGTCTCCTGTGGAGGAAGGACAGCGGCTGGATCACTGGCCAA
GTTCTGCGAGTGAACGGGGGCAGTGTTGTCTGAATGACACTCTCTGGCCG
TGTGGTCGTCGTCACTGGCGCCTCCAAGGGCATCGGGAAAGAAATCGCCC
TGCGAGCTGCTGCCGAAGGTGCCAATGTCGTCATCAATTACCTGTCGGAT
ATCAAAGCTGCAAATGCCCTGGTTATGCAATTAGGACACGACCGTGCTCT
GGCAGTGCGGGCTGATACTTCCAATATCAACGAGGTGGACAGCTTAATTG
AGGCCACTGTGTCTCGCTTCGGAAAAATCGACGTCCTAATTCCCAACGCA
GCTTACGTTCCGGATCGAACCCTGCAGAACGTCCCCGAAGAAGAATTTGA
CCGCGCCTTCGCGGTCAACGTCAAAGGACCTTGCTTCCTAGTACAGGTGC
GCTATTCCATTACACCGACCGTATTGCCTGGGGTGAGTAGAGCACTACCT
CACATGACGTCCGGTGGCACGATTATTTTTATCTCCACTGACATGACCGA
CGCGTCCACTGTGATGCCTCAATTCCTTCTCTATGTGTCGACCAAGGCGG
CATTAAATCAAATGGTTAAGGTGCTTGCACGCGACCTTGCCGCTACGGGT
ATCCGAGTGAATGCGGTCTCTCCGGGTGCAACAAGCACCGAGTCATTCCA
CAAGGCTATGGATGAGAACAAGGCCAAGATGCTTGCAAGTCACCATCCCT
TCAACCGCATTGGGCGCGCGGACGAGATTGCCGCAGCCGTGAGTCTCCTG
TGGAGGAAGGACAGCGGCTGGATCACTGGCCAAGTTCTGCGAGTGAACGG
GGGCAGTGTTGTCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000013.1 | supercontig | ACJE01000013.1:1731620..1732439 + |
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