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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000002.1:1680646..1682085+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_185082-T1 ID=ASPNIDRAFT_185082-T1|Name=ASPNIDRAFT_185082-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1440bp|location=Sequence derived from alignment at ACJE01000002.1:1680646..1682085+ (Aspergillus niger ATCC 1015)
ATGCAGATTCGCTCGCGGAGGTCACACAATAAGTCCCGCGCAGGATGTCA
GAATTGTAAGAAACGCCGTGTCAAGGTAGGCCTCCAAGCTGCATCTGCCC
GGTGGAAATCGGATGAACGCTTTCAACCCTCTGCAGTACTATATATACTA
CTTCTCTTCTACTAGTACTATATGGACTATAGAGCATTTTCCACCACAAT
GTTGTCTATTTTTCGTGCTTTGGCTTGCTTTATCCCCAAATCTGCCACAT
ATGCACCCCTCTCCGGTCATACTGACTCTCCCCAGTGTGATGAGAAAAAG
CCACAATGCACCAAATGTGTGCGACATTCGATCGAATGTGATTTTGCTTC
CCCGGCCTCGTCGACCTCCCCAGATCCAACCCGCCGATTCCGGTTTCGAC
CATCCAAATATCAACCCGGTTCACGAACATCACCTCCAAGCACTCATACA
GAAGCTGTAAGCAGCTCAGCTGCATCCGCATCTACCGGAGTGCAATGTGA
TCTCGCCGGCAGTGGCCTTTCCGGCGGCATCTCCTTTGCCGATCTGAAGC
TCTACCACCATTTTGTGACCTCGACCTACAAAACCTTGACAGACGAGAAA
ATGGACCACAAACGCGTCTGGTCACATCATGTTCCGCAATGGGGTATCTC
GTTCCCCTCCATCATGCATCTAATCCTGGCGCTGTCGGCGCTGCATCTGG
CGCATGGGGATCCCGCCTCGCGCACGCAGTTCATCGCTCAAGCGGACGAT
CACTTCACCTTTGGCGTCCGATCGGTGTCTGCTGTTCTGTGTCTGCTCAA
CATGGAAAACTGTCAGCTGATCTACATGTCTGCAGCATTGATTTGCCTGG
TGTATTTCGGTCGTGGACCCCGTCATGGCGAGTATCTGGTGTTCAGTGAC
ACCGGTCAGTCCGAGTGGCTCGTTCTGTTGCATGGTGTGCATTCTATCAT
CTCGCAAAATCATGATCGTGTCTTCACCGGAGTTCTAGAGCCGATACCGG
ACAATAGTATCGGTGGGGTGAGTGCCGAGTTGCAGGCAGAACTGGACGAG
CATCTGCAGCAGGTTCGACAAGTCCAGGCGTTTATTCTGTCCAATGTTAC
CGATGAAGGGTCCCGAGCTATGTTTGAAGCTACCCTAAATGACCTGCGCT
CGGCGTTCGAGGAAATATATAAGATGCGCAGCGCTGGGAAGGATGGCATC
TGTCTGATGCATCTGGTGATAGGGTGGGTGTACCGTCTACGGGAGGAGAT
GATTTCCCTGTTGGAGCAGAAGGACCGATACGCATTGGTTGTCTTTGGGC
ATTGGAGCATCTTACTGGTGTATATGCGGTCATCGTGGCTGATGCAGGGA
TGGGATGCGCATGTGCTACATGGGGTGCGCACGTCCTTGGGAGAGGAAGA
CCAGCACTGGCTTGCGTGGCCGATCCAGGTGATTGAAGGG back to topCoding sequence (CDS) from alignment at ACJE01000002.1:1680646..1682085+ >ASPNIDRAFT_185082-T1 ID=ASPNIDRAFT_185082-T1|Name=ASPNIDRAFT_185082-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2450bp|location=Sequence derived from alignment at ACJE01000002.1:1680646..1682085+ (Aspergillus niger ATCC 1015)
ATGCAGATTCGCTCGCGGAGGTCACACAATAAGTCCCGCGCAGGATGTCA
GAATTGTAAGAAACGCCGTGTCAAGTGTGATGAGAAAAAGCCACAATGCA
CCAAATGTGTGCGACATTCGATCGAATGTGATTTTGCTTCCCCGGCCTCG
TCGACCTCCCCAGATCCAACCCGCCGATTCCGGTTTCGACCATCCAAATA
TCAACCCGGTTCACGAACATCACCTCCAAGCACTCATACAGAAGCTGTAA
GCAGCTCAGCTGCATCCGCATCTACCGGAGTGCAATGTGATCTCGCCGGC
AGTGGCCTTTCCGGCGGCATCTCCTTTGCCGATCTGAAGCTCTACCACCA
TTTTGTGACCTCGACCTACAAAACCTTGACAGACGAGAAAATGGACCACA
AACGCGTCTGGTCACATCATGTTCCGCAATGGGGTATCTCGTTCCCCTCC
ATCATGCATCTAATCCTGGCGCTGTCGGCGCTGCATCTGGCGCATGGGGA
TCCCGCCTCGCGCACGCAGTTCATCGCTCAAGCGGACGATCACTTCACCT
TTGGCGTCCGATCGGTGTCTGCTGTTCTGTGTCTGCTCAACATGGAAAAC
TGTCAGCTGATCTACATGTCTGCAGCATTGATTTGCCTGGTGTATTTCGG
TCGTGGACCCCGTCATGGCGAGTATCTGGTGTTCAGTGACACCGGTCAGT
CCGAGTGGCTCGTTCTGTTGCATGGTGTGCATTCTATCATCTCGCAAAAT
CATGATCGTGTCTTCACCGGAGTTCTAGAGCCGATACCGGACAATAGTAT
CGGTGGGGTGAGTGCCGAGTTGCAGGCAGAACTGGACGAGCATCTGCAGC
AGGTTCGACAAGTCCAGGCGTTTATTCTGTCCAATGTTACCGATGAAGGG
TCCCGAGCTATGTTTGAAGCTACCCTAAATGACCTGCGCTCGGCGTTCGA
GGAAATATATAAGATGCGCAGCGCTGGGAAGGATGGCATCTGTCTGATGC
ATCTGGTGATAGGGTGGGTGTACCGTCTACGGGAGGAGATGATTTCCCTG
TTGGAGCAGAAGGACCGATACGCATTGGTTGTCTTTGGGCATTGGAGCAT
CTTACTGGTGTATATGCGGTCATCGTGGCTGATGCAGGGATGGGATGCGC
ATGTGCTACATGGGGTGCGCACGTCCTTGGGAGAGGAAGACCAGCACTGG
CTTGCGTGGCCGATCCAGGTGATTGATGCAGATTCGCTCGCGGAGGTCAC
ACAATAAGTCCCGCGCAGGATGTCAGAATTGTAAGAAACGCCGTGTCAAG
TGTGATGAGAAAAAGCCACAATGCACCAAATGTGTGCGACATTCGATCGA
ATGTGATTTTGCTTCCCCGGCCTCGTCGACCTCCCCAGATCCAACCCGCC
GATTCCGGTTTCGACCATCCAAATATCAACCCGGTTCACGAACATCACCT
CCAAGCACTCATACAGAAGCTGTAAGCAGCTCAGCTGCATCCGCATCTAC
CGGAGTGCAATGTGATCTCGCCGGCAGTGGCCTTTCCGGCGGCATCTCCT
TTGCCGATCTGAAGCTCTACCACCATTTTGTGACCTCGACCTACAAAACC
TTGACAGACGAGAAAATGGACCACAAACGCGTCTGGTCACATCATGTTCC
GCAATGGGGTATCTCGTTCCCCTCCATCATGCATCTAATCCTGGCGCTGT
CGGCGCTGCATCTGGCGCATGGGGATCCCGCCTCGCGCACGCAGTTCATC
GCTCAAGCGGACGATCACTTCACCTTTGGCGTCCGATCGGTGTCTGCTGT
TCTGTGTCTGCTCAACATGGAAAACTGTCAGCTGATCTACATGTCTGCAG
CATTGATTTGCCTGGTGTATTTCGGTCGTGGACCCCGTCATGGCGAGTAT
CTGGTGTTCAGTGACACCGGTCAGTCCGAGTGGCTCGTTCTGTTGCATGG
TGTGCATTCTATCATCTCGCAAAATCATGATCGTGTCTTCACCGGAGTTC
TAGAGCCGATACCGGACAATAGTATCGGTGGGGTGAGTGCCGAGTTGCAG
GCAGAACTGGACGAGCATCTGCAGCAGGTTCGACAAGTCCAGGCGTTTAT
TCTGTCCAATGTTACCGATGAAGGGTCCCGAGCTATGTTTGAAGCTACCC
TAAATGACCTGCGCTCGGCGTTCGAGGAAATATATAAGATGCGCAGCGCT
GGGAAGGATGGCATCTGTCTGATGCATCTGGTGATAGGGTGGGTGTACCG
TCTACGGGAGGAGATGATTTCCCTGTTGGAGCAGAAGGACCGATACGCAT
TGGTTGTCTTTGGGCATTGGAGCATCTTACTGGTGTATATGCGGTCATCG
TGGCTGATGCAGGGATGGGATGCGCATGTGCTACATGGGGTGCGCACGTC
CTTGGGAGAGGAAGACCAGCACTGGCTTGCGTGGCCGATCCAGGTGATTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000002.1 | supercontig | ACJE01000002.1:1680646..1682085 + |
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