You are here

Home

ASPNIDRAFT_185409-T1, ASPNIDRAFT_185409-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_185409-T1
Unique NameASPNIDRAFT_185409-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:1286602..1288275+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_185409-T1 ID=ASPNIDRAFT_185409-T1|Name=ASPNIDRAFT_185409-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1674bp|location=Sequence derived from alignment at ACJE01000002.1:1286602..1288275+ (Aspergillus niger ATCC 1015)
ATGATCCGAACCCTCATCACGCTCGGCCTGTACGGGTTCGTCCAACAGGT
ATCGAGCAAAGATGTGTACCTGGATTGGAATATAACTTGGGTGACTGCAG
CACCGGATGGGTATGCGAGGCCTGTGATCGGCATCAATGGACACTGGCCT
TGTCCTCAGATCGACGTCGATGTTGGCGATAACCTCATCGTCGACGTGTA
CAACGGGCTGGGTAACGAGTCCACCGGAATCCATTGGCATGGTCTCCATC
AGAACTACAATGGGTACATGGACGGTGTCCCAGGAGTCACTCAATGCGAG
CTCCACCCCAACCAGCGGATGCGCTACATTGTTCCGGTAAGCTGACCCTG
CTTGCTGGATCAGTACCTGAACTGCGCCTTCTGACCCATGGATCTAGATC
AACCAAACCGGCACATATTGGTACCACTCCCACGAGCCCGGTCAATATCC
TGATGGGTTGCGCGGACCCATCATCGTGCACGATAATGTTCCTGCGCCGT
ATCACTATGACGAGGAAATGACTCTCACTCTATCAGACTGGTATCATGTA
CAAATACCTGTCTTGCTCGATGAATTCATTGTTCCATCGGACCATGCCCC
CTATGGCGGTCAAGAGCCACTGCCTGATGCGGTTTTGTTCAATGACATGC
ATAACACCAAGATCAGCGTCAAGCCCGGCACGACCTACCTGATCCACGTT
GTTTGCATGGGAAACTTCCCCGGCCATGCACTCGTCATTGACGACCACGA
CATGACCATTGTTGGTATGGATGGCATTGCAGTGGAACCGCATTTTCTTC
CACCCCAGTATCTGCGTGTGGCCGTTGGGCAACGAGTCGACATCCTCCTC
ACCACCAAAAACGATACTAGCAAGAACTATGCGATCTGGGACGGCCTCGA
TATTGACGAAATGTTTGTTCAAGAGGGAAGGAGCCCACCTCAAGGGTACA
ATCCCAACGGCACCGCATGGCTCATGTACAATGAAGATGCTCCTTTGCCT
CCTCCACCAGTGATTCATGTCAACAATGCAAGTCTGGACTTCCTCGACGA
TGTGACCTTGACACCGAGAGACCATCTTCCGTTGATCGACCCAATACAAC
ACCAATTCATCTTCGATGTCTACCCAACCACAGTGGATGGAAAGCCCGCC
TACAGCATCAACAATATGACATATAACGCTCCCGACTCTCCCACGCTGTA
TACTGCCATTTATTCTGACCCTGAGGCTTGCATGGACCCGGACCTTTATG
GGGATGTGAACCCTTTTGTTGTTAATTATGGTGATGTGGTGGAGATTGTT
CTCAACAACCACCATGACAACCTCCACCCGTGGCATCTCCACGGTCATGA
TTTCCAGGTGCTGCAGCGTACCTACCCGTACGGTGGCTTCTTTGATGGCT
ACCGTAACGTTTCGGCGACTCCCATGCGCAGAGATACGCTCATGGTGGAG
CCTCTGGGACATTTCGTGATTAGATTCCGTGCAATGAATCCTGATAAGTA
TTCCCTCGCTGCAGATTAGATGTCTCCAAACTGACGTTGATCGGTCAATT
ACGCATCTGGATGTTCCATTGCCATATTGAGTGGCACGTTGAGATCCGCC
TCATGGCGATCATTATCGAAGCACCGGACCAGCTGCAGAACATGACTATA
CCGGATGATCACCTCAAGATTTGC
back to top

Coding sequence (CDS) from alignment at ACJE01000002.1:1286602..1288275+

>ASPNIDRAFT_185409-T1 ID=ASPNIDRAFT_185409-T1|Name=ASPNIDRAFT_185409-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4788bp|location=Sequence derived from alignment at ACJE01000002.1:1286602..1288275+ (Aspergillus niger ATCC 1015)
ATGATCCGAACCCTCATCACGCTCGGCCTGTACGGGTTCGTCCAACAGGT
ATCGAGCAAAGATGTGTACCTGGATTGGAATATAACTTGGGTGACTGCAG
CACCGGATGGGTATGCGAGGCCTGTGATCGGCATCAATGGACACTGGCCT
TGTCCTCAGATCGACGTCGATGTTGGCGATAACCTCATCGTCGACGTGTA
CAACGGGCTGGGTAACGAGTCCACCGGAATCCATTGGCATGGTCTCCATC
AGAACTACAATGGGTACATGGACGGTGTCCCAGGAGTCACTCAATGCGAG
CTCCACCCCAACCAGCGGATGCGCTACATTGTTCCGATCAACCAAACCGG
CACATATTGGTACCACTCCCACGAGCCCGGTCAATATCCTGATGGGTTGC
GCGGACCCATCATCGTGCACGATAATGTTCCTGCGCCGTATCACTATGAC
GAGGAAATGACTCTCACTCTATCAGACTGGTATCATGTACAAATACCTGT
CTTGCTCGATGAATTCATTGTTCCATCGGACCATGCCCCCTATGGCGGTC
AAGAGCCACTGCCTGATGCGGTTTTGTTCAATGACATGCATAACACCAAG
ATCAGCGTCAAGCCCGGCACGACCTACCTGATCCACGTTGTTTGCATGGG
AAACTTCCCCGGCCATGCACTCGTCATTGACGACCACGACATGACCATTG
TTGGTATGGATGGCATTGCAGTGGAACCGCATTTTCTTCCACCCCAGTAT
CTGCGTGTGGCCGTTGGGCAACGAGTCGACATCCTCCTCACCACCAAAAA
CGATACTAGCAAGAACTATGCGATCTGGGACGGCCTCGATATTGACGAAA
TGTTTGTTCAAGAGGGAAGGAGCCCACCTCAAGGGTACAATCCCAACGGC
ACCGCATGGCTCATGTACAATGAAGATGCTCCTTTGCCTCCTCCACCAGT
GATTCATGTCAACAATGCAAGTCTGGACTTCCTCGACGATGTGACCTTGA
CACCGAGAGACCATCTTCCGTTGATCGACCCAATACAACACCAATTCATC
TTCGATGTCTACCCAACCACAGTGGATGGAAAGCCCGCCTACAGCATCAA
CAATATGACATATAACGCTCCCGACTCTCCCACGCTGTATACTGCCATTT
ATTCTGACCCTGAGGCTTGCATGGACCCGGACCTTTATGGGGATGTGAAC
CCTTTTGTTGTTAATTATGGTGATGTGGTGGAGATTGTTCTCAACAACCA
CCATGACAACCTCCACCCGTGGCATCTCCACGGTCATGATTTCCAGGTGC
TGCAGCGTACCTACCCGTACGGTGGCTTCTTTGATGGCTACCGTAACGTT
TCGGCGACTCCCATGCGCAGAGATACGCTCATGGTGGAGCCTCTGGGACA
TTTCGTGATTAGATTCCGTGCAATGAATCCTGATAAATTAGATGTCTCCA
AACTGACGTTGATCGGTCAATTACGCATCTGGATGTTCCATTGCCATATT
GAGTGGCACGTTGAGATCCGCCTCATGGCGATCATTATCGAAGCACCGGA
CCAGCTGCAGAACATGACTATACCGGATGATCACCTCAAGATTTGCATGA
TCCGAACCCTCATCACGCTCGGCCTGTACGGGTTCGTCCAACAGGTATCG
AGCAAAGATGTGTACCTGGATTGGAATATAACTTGGGTGACTGCAGCACC
GGATGGGTATGCGAGGCCTGTGATCGGCATCAATGGACACTGGCCTTGTC
CTCAGATCGACGTCGATGTTGGCGATAACCTCATCGTCGACGTGTACAAC
GGGCTGGGTAACGAGTCCACCGGAATCCATTGGCATGGTCTCCATCAGAA
CTACAATGGGTACATGGACGGTGTCCCAGGAGTCACTCAATGCGAGCTCC
ACCCCAACCAGCGGATGCGCTACATTGTTCCGATCAACCAAACCGGCACA
TATTGGTACCACTCCCACGAGCCCGGTCAATATCCTGATGGGTTGCGCGG
ACCCATCATCGTGCACGATAATGTTCCTGCGCCGTATCACTATGACGAGG
AAATGACTCTCACTCTATCAGACTGGTATCATGTACAAATACCTGTCTTG
CTCGATGAATTCATTGTTCCATCGGACCATGCCCCCTATGGCGGTCAAGA
GCCACTGCCTGATGCGGTTTTGTTCAATGACATGCATAACACCAAGATCA
GCGTCAAGCCCGGCACGACCTACCTGATCCACGTTGTTTGCATGGGAAAC
TTCCCCGGCCATGCACTCGTCATTGACGACCACGACATGACCATTGTTGG
TATGGATGGCATTGCAGTGGAACCGCATTTTCTTCCACCCCAGTATCTGC
GTGTGGCCGTTGGGCAACGAGTCGACATCCTCCTCACCACCAAAAACGAT
ACTAGCAAGAACTATGCGATCTGGGACGGCCTCGATATTGACGAAATGTT
TGTTCAAGAGGGAAGGAGCCCACCTCAAGGGTACAATCCCAACGGCACCG
CATGGCTCATGTACAATGAAGATGCTCCTTTGCCTCCTCCACCAGTGATT
CATGTCAACAATGCAAGTCTGGACTTCCTCGACGATGTGACCTTGACACC
GAGAGACCATCTTCCGTTGATCGACCCAATACAACACCAATTCATCTTCG
ATGTCTACCCAACCACAGTGGATGGAAAGCCCGCCTACAGCATCAACAAT
ATGACATATAACGCTCCCGACTCTCCCACGCTGTATACTGCCATTTATTC
TGACCCTGAGGCTTGCATGGACCCGGACCTTTATGGGGATGTGAACCCTT
TTGTTGTTAATTATGGTGATGTGGTGGAGATTGTTCTCAACAACCACCAT
GACAACCTCCACCCGTGGCATCTCCACGGTCATGATTTCCAGGTGCTGCA
GCGTACCTACCCGTACGGTGGCTTCTTTGATGGCTACCGTAACGTTTCGG
CGACTCCCATGCGCAGAGATACGCTCATGGTGGAGCCTCTGGGACATTTC
GTGATTAGATTCCGTGCAATGAATCCTGATAAATTAGATGTCTCCAAACT
GACGTTGATCGGTCAATTACGCATCTGGATGTTCCATTGCCATATTGAGT
GGCACGTTGAGATCCGCCTCATGGCGATCATTATCGAAGCACCGGACCAG
CTGCAGAACATGACTATACCGGATGATCACCTCAAGATTTGCATGATCCG
AACCCTCATCACGCTCGGCCTGTACGGGTTCGTCCAACAGGTATCGAGCA
AAGATGTGTACCTGGATTGGAATATAACTTGGGTGACTGCAGCACCGGAT
GGGTATGCGAGGCCTGTGATCGGCATCAATGGACACTGGCCTTGTCCTCA
GATCGACGTCGATGTTGGCGATAACCTCATCGTCGACGTGTACAACGGGC
TGGGTAACGAGTCCACCGGAATCCATTGGCATGGTCTCCATCAGAACTAC
AATGGGTACATGGACGGTGTCCCAGGAGTCACTCAATGCGAGCTCCACCC
CAACCAGCGGATGCGCTACATTGTTCCGATCAACCAAACCGGCACATATT
GGTACCACTCCCACGAGCCCGGTCAATATCCTGATGGGTTGCGCGGACCC
ATCATCGTGCACGATAATGTTCCTGCGCCGTATCACTATGACGAGGAAAT
GACTCTCACTCTATCAGACTGGTATCATGTACAAATACCTGTCTTGCTCG
ATGAATTCATTGTTCCATCGGACCATGCCCCCTATGGCGGTCAAGAGCCA
CTGCCTGATGCGGTTTTGTTCAATGACATGCATAACACCAAGATCAGCGT
CAAGCCCGGCACGACCTACCTGATCCACGTTGTTTGCATGGGAAACTTCC
CCGGCCATGCACTCGTCATTGACGACCACGACATGACCATTGTTGGTATG
GATGGCATTGCAGTGGAACCGCATTTTCTTCCACCCCAGTATCTGCGTGT
GGCCGTTGGGCAACGAGTCGACATCCTCCTCACCACCAAAAACGATACTA
GCAAGAACTATGCGATCTGGGACGGCCTCGATATTGACGAAATGTTTGTT
CAAGAGGGAAGGAGCCCACCTCAAGGGTACAATCCCAACGGCACCGCATG
GCTCATGTACAATGAAGATGCTCCTTTGCCTCCTCCACCAGTGATTCATG
TCAACAATGCAAGTCTGGACTTCCTCGACGATGTGACCTTGACACCGAGA
GACCATCTTCCGTTGATCGACCCAATACAACACCAATTCATCTTCGATGT
CTACCCAACCACAGTGGATGGAAAGCCCGCCTACAGCATCAACAATATGA
CATATAACGCTCCCGACTCTCCCACGCTGTATACTGCCATTTATTCTGAC
CCTGAGGCTTGCATGGACCCGGACCTTTATGGGGATGTGAACCCTTTTGT
TGTTAATTATGGTGATGTGGTGGAGATTGTTCTCAACAACCACCATGACA
ACCTCCACCCGTGGCATCTCCACGGTCATGATTTCCAGGTGCTGCAGCGT
ACCTACCCGTACGGTGGCTTCTTTGATGGCTACCGTAACGTTTCGGCGAC
TCCCATGCGCAGAGATACGCTCATGGTGGAGCCTCTGGGACATTTCGTGA
TTAGATTCCGTGCAATGAATCCTGATAAATTAGATGTCTCCAAACTGACG
TTGATCGGTCAATTACGCATCTGGATGTTCCATTGCCATATTGAGTGGCA
CGTTGAGATCCGCCTCATGGCGATCATTATCGAAGCACCGGACCAGCTGC
AGAACATGACTATACCGGATGATCACCTCAAGATTTGC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005507copper ion binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_185409ASPNIDRAFT_185409Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_185409-T1.exon1ASPNIDRAFT_185409-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_185409-T1.exon2ASPNIDRAFT_185409-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_185409-T1.exon3ASPNIDRAFT_185409-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_185409-T1.cdsASPNIDRAFT_185409-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_185409-T1ASPNIDRAFT_185409-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:AA1_1
NoteCAZy:AA1_3
NoteCAZy:AA1_2
DBxrefInterPro:IPR033138
DBxrefInterPro:IPR011707
DBxrefInterPro:IPR008972
DBxrefInterPro:IPR011706
DBxrefInterPro:IPR001117
DBxrefPFAM:PF07732
DBxrefPFAM:PF07731
DBxrefPFAM:PF00394
Productlaccase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:1286602..1288275 +
Powered by Drupal