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ASPNIDRAFT_185619-T1, ASPNIDRAFT_185619-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_185619-T1
Unique NameASPNIDRAFT_185619-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:995222..995701-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_185619-T1 ID=ASPNIDRAFT_185619-T1|Name=ASPNIDRAFT_185619-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=480bp|location=Sequence derived from alignment at ACJE01000002.1:995222..995701- (Aspergillus niger ATCC 1015)
ATGAAGGGAGTGTGTTTGAAGACGGGTATTACGAAGCCGAAGAAGCCTAA
CTCCGGTGAGCGGAAGACGGCGAGAGTGAGGTTGAGTAGTGGGAAGGTGG
TTACGGCTTATATTCCTGGTGAAGGTGAGATCACTTTCCTCCATTCGTTT
TTTTGTGGTTCGGGTTGGGGATCGGGGGTGAGGAGAATGAGAATAGATGG
GGATAATGGAATTGAGCGAGAGAGGCTAATATCTCTGGTCTGTGTGTAGG
ACACAATATCCAGCAGCACAGTGTCGTTATGGTCCGTGGTGGTCGTGTGC
CTGATTGTCCTGGTGTGAAGTACCATTTGGTTCGTGGTGCTATGGATTTG
GTAGGTTTACTTTCTGATATGGGTTTCCTGGGAATTCGGGGGTAGGTTTG
CTAACTTCTCTCAGGGTGGTGTTGCTTCTCGGTTGAACAGTCGGTCCAAG
TATGGTACGAAGAAGCCTAAGAAGGACTAG
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Coding sequence (CDS) from alignment at ACJE01000002.1:995222..995701-

>ASPNIDRAFT_185619-T1 ID=ASPNIDRAFT_185619-T1|Name=ASPNIDRAFT_185619-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=873bp|location=Sequence derived from alignment at ACJE01000002.1:995222..995701- (Aspergillus niger ATCC 1015)
GGTGGTGTTGCTTCTCGGTTGAACAGTCGGTCCAAGTATGGTACGAAGAA
GCCTAAGAAGGACTAGGACACAATATCCAGCAGCACAGTGTCGTTATGGT
CCGTGGTGGTCGTGTGCCTGATTGTCCTGGTGTGAAGTACCATTTGGTTC
GTGGTGCTATGGATTTGATGAAGGGAGTGTGTTTGAAGACGGGTATTACG
AAGCCGAAGAAGCCTAACTCCGGTGAGCGGAAGACGGCGAGAGTGAGGTT
GAGTAGTGGGAAGGTGGTTACGGCTTATATTCCTGGTGAAGGGTGGTGTT
GCTTCTCGGTTGAACAGTCGGTCCAAGTATGGTACGAAGAAGCCTAAGAA
GGACTAGGACACAATATCCAGCAGCACAGTGTCGTTATGGTCCGTGGTGG
TCGTGTGCCTGATTGTCCTGGTGTGAAGTACCATTTGGTTCGTGGTGCTA
TGGATTTGATGAAGGGAGTGTGTTTGAAGACGGGTATTACGAAGCCGAAG
AAGCCTAACTCCGGTGAGCGGAAGACGGCGAGAGTGAGGTTGAGTAGTGG
GAAGGTGGTTACGGCTTATATTCCTGGTGAAGGGTGGTGTTGCTTCTCGG
TTGAACAGTCGGTCCAAGTATGGTACGAAGAAGCCTAAGAAGGACTAGGA
CACAATATCCAGCAGCACAGTGTCGTTATGGTCCGTGGTGGTCGTGTGCC
TGATTGTCCTGGTGTGAAGTACCATTTGGTTCGTGGTGCTATGGATTTGA
TGAAGGGAGTGTGTTTGAAGACGGGTATTACGAAGCCGAAGAAGCCTAAC
TCCGGTGAGCGGAAGACGGCGAGAGTGAGGTTGAGTAGTGGGAAGGTGGT
TACGGCTTATATTCCTGGTGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_185619ASPNIDRAFT_185619Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_185619-T1ASPNIDRAFT_185619-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_185619-T1.cdsASPNIDRAFT_185619-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_185619-T1.exon3ASPNIDRAFT_185619-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_185619-T1.exon2ASPNIDRAFT_185619-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_185619-T1.exon1ASPNIDRAFT_185619-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG092653KS
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR005679
DBxrefInterPro:IPR006032
DBxrefPFAM:PF00164
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:995222..995701 -
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