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ASPNIDRAFT_186367-T1, ASPNIDRAFT_186367-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_186367-T1
Unique NameASPNIDRAFT_186367-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:314213..315886+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_186367-T1 ID=ASPNIDRAFT_186367-T1|Name=ASPNIDRAFT_186367-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1674bp|location=Sequence derived from alignment at ACJE01000006.1:314213..315886+ (Aspergillus niger ATCC 1015)
ATGCTCCCCCCTCTTGCACGAGTCCATTCTCCGGCGGATACTATACCAGT
GCGGCATTTACATCAGTCGATTGGAAAATCGAAGAAACCGATCACTGTCG
TACGATGGACACCGGAAGGAAGACGCCTGCTAACGGGAGGCCACACGGGC
GAATTCATGCTATGGAATGGAACTGCCTTCAACTTCGAAACTGTCATGGA
TGTGGGTGTCGCTCGGATACATTAATCCCCTAGCCGAAGATTTTTGTTGC
TGATGGTTGAATAGGCACATTATGATCAGCTACAAGCTGGAGTAACCTCC
TTAGCTTGGTCCCACAGTCATGACTGGTTAATATCCGGAGGACAGAAGGG
TGACGTGAAGTATTGGCGACCTAACTTTAACAACGTCGAGACGATCGATG
ACGCACATCACGATGCTGTACGCGATTTGGCATGGTCACCAAGTGATACT
AAATTCCTCTCCGCATCCGACGACACAACGCTGAAGATATTCGATTTCAC
CGCGAGAACTTGCGATACCGTTCTCACCGGTCACAACTGGGATGTCAAAT
CCTGCGACTGGCATCCCACCAAAGGTCTCCTTGTCTCTGGGTCCAAAGAC
CATCAGGTCAAGTTCTGGGATCCGCGCACAGCAAGATGCTTGACAACGCT
CCATAGCCACAAGAATACCGTCACAGCGACGAGGTTTTCCCGCGTAAACA
ATAACCTTCTAGCTACATCCTCTCGGGATCAAACGGCGAGAGTTTTCGAC
TTGCGCATGATGCGAGATATTTGTATCCTCCGAGGCCATGAGAAGCCCGT
CTCCTCTCTAACATGGCACCCGATTCACAGCTCTCTCATATCTACAGGTA
GTGAGGACGGGTCTCTATATCACTATTTGCTTGATGAACCAAACCTGCCC
TCCGGGCAGATCCCTACAATTGCGCCATATGACAGCAACGACCCGGCTAA
CACGCCGGCGCAGGTGATCTACCCTGCCCACAAGGTACAGTACGCGCACG
GTGCCACCATCTGGTCCCTCGACTGGCATCCTCTGGGTCATATTCTTGCA
TCCGGATCTAAAGATAACTTCACACGGTTCTGGTCCCGTGCCAGACCCGG
AGAGACTAGTTACATGAAGGATAGGTTCCACATCGGAGAAGAGGCGGCGG
AGGCCCAGGGTACATGGAGCCGGGGCTTCGGACGGCGGCAGATGCGTGAA
GAGGAAGAACAAGAACTTCAGGATGAGGCAGAGAGCTTGGTCGATCAGAA
GAAACCGGCCGGAATGTCATCTCTTCCCGGAATTCAATTCGCACCACCCG
GCGCCGCACCACAGCCAGACGGGATGGGTTCGATACTGCCAGGAATTGGG
GCTCCCCAGCCCCCACCCCAGCCGGGGTTTTCCACTTCAATGCCGCAAAT
GGATCCTGGGCGTCTAGCAGCTCTTTTGTCCAATCAACCGCCCCCTCAGC
CGAACAATTTCCCTCCCACAACGGGACTGCCAGGGTTTCCCATGCACCCT
GCTATGTCGGGGACACCTCCGGTGAACGTTGACCTGGCAGAACTGCAGAA
GCAGCTTCTTTCTCAAGGAATCTCGCTGCCCCAGAACTTTCCGCCGCCAA
ATTTTCCTGGCATGCCCGGGGGCCTTCCCGGCCTGCAAGGGAGCAGTACG
CCCGATCACGGATATGGAAGATGA
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Coding sequence (CDS) from alignment at ACJE01000006.1:314213..315886+

>ASPNIDRAFT_186367-T1 ID=ASPNIDRAFT_186367-T1|Name=ASPNIDRAFT_186367-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3078bp|location=Sequence derived from alignment at ACJE01000006.1:314213..315886+ (Aspergillus niger ATCC 1015)
ATGCTCCCCCCTCTTGCACGAGTCCATTCTCCGGCGGATACTATACCAGT
GCGGCATTTACATCAGTCGATTGGAAAATCGAAGAAACCGATCACTGTCG
TACGATGGACACCGGAAGGAAGACGCCTGCTAACGGGAGGCCACACGGGC
GAATTCATGCTATGGAATGGAACTGCCTTCAACTTCGAAACTGTCATGGA
TGTGGGACAGAAGGGTGACGTGAAGTATTGGCGACCTAACTTTAACAACG
TCGAGACGATCGATGACGCACATCACGATGCTGTACGCGATTTGGCATGG
TCACCAAGTGATACTAAATTCCTCTCCGCATCCGACGACACAACGCTGAA
GATATTCGATTTCACCGCGAGAACTTGCGATACCGTTCTCACCGGTCACA
ACTGGGATGTCAAATCCTGCGACTGGCATCCCACCAAAGGTCTCCTTGTC
TCTGGGTCCAAAGACCATCAGGTCAAGTTCTGGGATCCGCGCACAGCAAG
ATGCTTGACAACGCTCCATAGCCACAAGAATACCGTCACAGCGACGAGGT
TTTCCCGCGTAAACAATAACCTTCTAGCTACATCCTCTCGGGATCAAACG
GCGAGAGTTTTCGACTTGCGCATGATGCGAGATATTTGTATCCTCCGAGG
CCATGAGAAGCCCGTCTCCTCTCTAACATGGCACCCGATTCACAGCTCTC
TCATATCTACAGGTAGTGAGGACGGGTCTCTATATCACTATTTGCTTGAT
GAACCAAACCTGCCCTCCGGGCAGATCCCTACAATTGCGCCATATGACAG
CAACGACCCGGCTAACACGCCGGCGCAGGTGATCTACCCTGCCCACAAGG
TACAGTACGCGCACGGTGCCACCATCTGGTCCCTCGACTGGCATCCTCTG
GGTCATATTCTTGCATCCGGATCTAAAGATAACTTCACACGGTTCTGGTC
CCGTGCCAGACCCGGAGAGACTAGTTACATGAAGGATAGGTTCCACATCG
GAGAAGAGGCGGCGGAGGCCCAGGGTACATGGAGCCGGGGCTTCGGACGG
CGGCAGATGCGTGAAGAGGAAGAACAAGAACTTCAGGATGAGGCAGAGAG
CTTGGTCGATCAGAAGAAACCGGCCGGAATGTCATCTCTTCCCGGAATTC
AATTCGCACCACCCGGCGCCGCACCACAGCCAGACGGGATGGGTTCGATA
CTGCCAGGAATTGGGGCTCCCCAGCCCCCACCCCAGCCGGGGTTTTCCAC
TTCAATGCCGCAAATGGATCCTGGGCGTCTAGCAGCTCTTTTGTCCAATC
AACCGCCCCCTCAGCCGAACAATTTCCCTCCCACAACGGGACTGCCAGGG
TTTCCCATGCACCCTGCTATGTCGGGGACACCTCCGGTGAACGTTGACCT
GGCAGAACTGCAGAAGCAGCTTCTTTCTCAAGGAATCTCGCTGCCCCAGA
ACTTTCCGCCGCCAAATTTTCCTGGCATGCCCGGGGGCCTTCCCGGCCTG
CAAGGGAGCAGTACGCCCGATCACGGATATGGAAGATGAATGCTCCCCCC
TCTTGCACGAGTCCATTCTCCGGCGGATACTATACCAGTGCGGCATTTAC
ATCAGTCGATTGGAAAATCGAAGAAACCGATCACTGTCGTACGATGGACA
CCGGAAGGAAGACGCCTGCTAACGGGAGGCCACACGGGCGAATTCATGCT
ATGGAATGGAACTGCCTTCAACTTCGAAACTGTCATGGATGTGGGACAGA
AGGGTGACGTGAAGTATTGGCGACCTAACTTTAACAACGTCGAGACGATC
GATGACGCACATCACGATGCTGTACGCGATTTGGCATGGTCACCAAGTGA
TACTAAATTCCTCTCCGCATCCGACGACACAACGCTGAAGATATTCGATT
TCACCGCGAGAACTTGCGATACCGTTCTCACCGGTCACAACTGGGATGTC
AAATCCTGCGACTGGCATCCCACCAAAGGTCTCCTTGTCTCTGGGTCCAA
AGACCATCAGGTCAAGTTCTGGGATCCGCGCACAGCAAGATGCTTGACAA
CGCTCCATAGCCACAAGAATACCGTCACAGCGACGAGGTTTTCCCGCGTA
AACAATAACCTTCTAGCTACATCCTCTCGGGATCAAACGGCGAGAGTTTT
CGACTTGCGCATGATGCGAGATATTTGTATCCTCCGAGGCCATGAGAAGC
CCGTCTCCTCTCTAACATGGCACCCGATTCACAGCTCTCTCATATCTACA
GGTAGTGAGGACGGGTCTCTATATCACTATTTGCTTGATGAACCAAACCT
GCCCTCCGGGCAGATCCCTACAATTGCGCCATATGACAGCAACGACCCGG
CTAACACGCCGGCGCAGGTGATCTACCCTGCCCACAAGGTACAGTACGCG
CACGGTGCCACCATCTGGTCCCTCGACTGGCATCCTCTGGGTCATATTCT
TGCATCCGGATCTAAAGATAACTTCACACGGTTCTGGTCCCGTGCCAGAC
CCGGAGAGACTAGTTACATGAAGGATAGGTTCCACATCGGAGAAGAGGCG
GCGGAGGCCCAGGGTACATGGAGCCGGGGCTTCGGACGGCGGCAGATGCG
TGAAGAGGAAGAACAAGAACTTCAGGATGAGGCAGAGAGCTTGGTCGATC
AGAAGAAACCGGCCGGAATGTCATCTCTTCCCGGAATTCAATTCGCACCA
CCCGGCGCCGCACCACAGCCAGACGGGATGGGTTCGATACTGCCAGGAAT
TGGGGCTCCCCAGCCCCCACCCCAGCCGGGGTTTTCCACTTCAATGCCGC
AAATGGATCCTGGGCGTCTAGCAGCTCTTTTGTCCAATCAACCGCCCCCT
CAGCCGAACAATTTCCCTCCCACAACGGGACTGCCAGGGTTTCCCATGCA
CCCTGCTATGTCGGGGACACCTCCGGTGAACGTTGACCTGGCAGAACTGC
AGAAGCAGCTTCTTTCTCAAGGAATCTCGCTGCCCCAGAACTTTCCGCCG
CCAAATTTTCCTGGCATGCCCGGGGGCCTTCCCGGCCTGCAAGGGAGCAG
TACGCCCGATCACGGATATGGAAGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PFS2ASPNIDRAFT_186367Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_186367-T1.exon1ASPNIDRAFT_186367-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_186367-T1.exon2ASPNIDRAFT_186367-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_186367-T1.cdsASPNIDRAFT_186367-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_186367-T1ASPNIDRAFT_186367-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261LPY
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Productpre-mRNA cleavage and polyadenylation factor (CPF) complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:314213..315886 +
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