You are here

Home

ASPNIDRAFT_186468-T1, ASPNIDRAFT_186468-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_186468-T1
Unique NameASPNIDRAFT_186468-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:851393..853244+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_186468-T1 ID=ASPNIDRAFT_186468-T1|Name=ASPNIDRAFT_186468-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1852bp|location=Sequence derived from alignment at ACJE01000006.1:851393..853244+ (Aspergillus niger ATCC 1015)
ATGCGTGCTCCTCCCTCCACCCATGCGAGGGATGCGGTAATTGGTCCCCT
GAGATCGCGGCGGGGTTGCAAAACCTGCAAGTAGGTGCTTCGAATCCATA
TCTCTGCGGCGCAAGCTTATAGGTATCATCTCAAGGGCCCGGAGAGTCAA
GTGTGGACAGGAAAAGCCAAGCTGTCTTCGATGCAGCAAGACAGGCCGTA
AGTGCGAGTATGAAGGCCCAAATTTAGGCACGTTTTCCTCCACACCTGCG
ACACTTTCAATTCTCGACAAGCCCCTGTCCTCGGCACCGGATACAGTCTG
GAAGGAGCGTCGCGCATTTGCCTACTACTTCCAACATATTGCCCTGTTTA
TCGGCGGGGGTCTGGAAGTTGACTTCTGGAGTACCATCGTTCCGCAGATT
TGCCGCAGCGAACCCGCTGTGTGGGATGCCATCATCTCCCTGAGTACCCT
GTTCGAAAGCCCCGAGCCATGTCCAGACATAGCTTTTCTACGCCAGAGAG
ATGTCCTTCTCCTTAACCAGTACCACCGAGACGCCATCAGCTGGTATTCC
CGCTCAATGTCCCAAGTCCGTCAGCGACTAGAGCGCGGTGACGGGGATGT
CTTGGTCGGACTGGTAAGCTGTATACTCTTTATGTGCATTGAAGGTTTCC
AGGGTGGTGCGGCACAAGCTACTCGGCTTTACTGTCAAGGCGTGCAACTC
ATTGTCACCTTGCGTGGTCAGATCGCTTCCGGGGCCGTATCGTCATCGAA
AGCTGCATGGTTGGAGGATATTATCGTTCCGATATTTATCCGTCTCGGGG
CGACAGCGCTCAATTTCTCCACTGTTCCAGTCGGCGCTTTACTACCCGAT
GTTCAGCATGTATTAACACAGGGGTTTACTTCCCTCAAATCGGCTCGCGA
GGCAATTGTTCTCTTACACACAGAGACTCAGCTTTTTCAGCGTATTTGCC
TACCACACTTGCTGAAGTCCGATGGCTTCCAGCCACCTCCTGAGCTAGTC
AATCAACGACTCGCTCTATTTGGTAGACTAAAGGTGTGGCACGCTGCGTT
CACGGACTTGATGGAAACCTTGCGCATGAAAGGGGCTTTATCACCGCAGC
AAATAAGCACTGGCGCCCTTCTTCTCGCTTATCACGAGATGCTATACGTA
ACGATCGGAACGTCCACATGTCAGTTGGAGACCGCAAACGACGCATACCT
TCTGCAATTCCAGAACATAGTGGATCAGTCTAAGTTCGCGCTAGGTGCTT
CGGCTCGATCAGACGGATCCCAACCTCCACTCACGCTTGAACTCGGTATC
TCAATACCCCTGTGGTTCACTAGTCTAAAATGCCGAGAACCCAAGCTTCG
ACAAACAGCACTAAGCCTAGCAGGTCAAGCACCTGCAGTGCAGGCGTTCT
ATAAAGTGAATACTGGGGCAAGGTGGTCACACACCATAATTACAATAGAA
GAAGTGTGCGCAGTGGCTATGAAGTCATCTGAAGGACTACCGGAGTCAAC
GAATCAACTCCAATACTCGCATTGTGAAGACTCTGGTATTAGCGTATTCG
GTTCAGATCTTGGAAGTCAACCCAGCACTCCAGGGCTGGAATTTGTGCCA
AGCCCATATTCCGTGGATTCGGATGTGGACGCCGGAACAGCGGTTACAGA
ACTCGTCCCAGAAGAGGCACGCATCAGACCCATAAATCTCTTCCGCGTCC
AAGACGGCTTCCCTCCGGGAACAACAGATGAAGAGATTGCAAGGTGGAGT
CCTTACCGTGAACAAAGCTTTCTGCATTATTTGCGAAATGAGCGTGATCC
AATCAGTGGTGCTTGGAAGATAGCCCATGGATTTACTCCAATCGATTATT
GA
back to top

Coding sequence (CDS) from alignment at ACJE01000006.1:851393..853244+

>ASPNIDRAFT_186468-T1 ID=ASPNIDRAFT_186468-T1|Name=ASPNIDRAFT_186468-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3594bp|location=Sequence derived from alignment at ACJE01000006.1:851393..853244+ (Aspergillus niger ATCC 1015)
ATGCGTGCTCCTCCCTCCACCCATGCGAGGGATGCGGTAATTGGTCCCCT
GAGATCGCGGCGGGGTTGCAAAACCTGCAAGGCCCGGAGAGTCAAGTGTG
GACAGGAAAAGCCAAGCTGTCTTCGATGCAGCAAGACAGGCCGTAAGTGC
GAGTATGAAGGCCCAAATTTAGGCACGTTTTCCTCCACACCTGCGACACT
TTCAATTCTCGACAAGCCCCTGTCCTCGGCACCGGATACAGTCTGGAAGG
AGCGTCGCGCATTTGCCTACTACTTCCAACATATTGCCCTGTTTATCGGC
GGGGGTCTGGAAGTTGACTTCTGGAGTACCATCGTTCCGCAGATTTGCCG
CAGCGAACCCGCTGTGTGGGATGCCATCATCTCCCTGAGTACCCTGTTCG
AAAGCCCCGAGCCATGTCCAGACATAGCTTTTCTACGCCAGAGAGATGTC
CTTCTCCTTAACCAGTACCACCGAGACGCCATCAGCTGGTATTCCCGCTC
AATGTCCCAAGTCCGTCAGCGACTAGAGCGCGGTGACGGGGATGTCTTGG
TCGGACTGGTAAGCTGTATACTCTTTATGTGCATTGAAGGTTTCCAGGGT
GGTGCGGCACAAGCTACTCGGCTTTACTGTCAAGGCGTGCAACTCATTGT
CACCTTGCGTGGTCAGATCGCTTCCGGGGCCGTATCGTCATCGAAAGCTG
CATGGTTGGAGGATATTATCGTTCCGATATTTATCCGTCTCGGGGCGACA
GCGCTCAATTTCTCCACTGTTCCAGTCGGCGCTTTACTACCCGATGTTCA
GCATGTATTAACACAGGGGTTTACTTCCCTCAAATCGGCTCGCGAGGCAA
TTGTTCTCTTACACACAGAGACTCAGCTTTTTCAGCGTATTTGCCTACCA
CACTTGCTGAAGTCCGATGGCTTCCAGCCACCTCCTGAGCTAGTCAATCA
ACGACTCGCTCTATTTGGTAGACTAAAGGTGTGGCACGCTGCGTTCACGG
ACTTGATGGAAACCTTGCGCATGAAAGGGGCTTTATCACCGCAGCAAATA
AGCACTGGCGCCCTTCTTCTCGCTTATCACGAGATGCTATACGTAACGAT
CGGAACGTCCACATGTCAGTTGGAGACCGCAAACGACGCATACCTTCTGC
AATTCCAGAACATAGTGGATCAGTCTAAGTTCGCGCTAGGTGCTTCGGCT
CGATCAGACGGATCCCAACCTCCACTCACGCTTGAACTCGGTATCTCAAT
ACCCCTGTGGTTCACTAGTCTAAAATGCCGAGAACCCAAGCTTCGACAAA
CAGCACTAAGCCTAGCAGGTCAAGCACCTGCAGTGCAGGCGTTCTATAAA
GTGAATACTGGGGCAAGGTGGTCACACACCATAATTACAATAGAAGAAGT
GTGCGCAGTGGCTATGAAGTCATCTGAAGGACTACCGGAGTCAACGAATC
AACTCCAATACTCGCATTGTGAAGACTCTGGTATTAGCGTATTCGGTTCA
GATCTTGGAAGTCAACCCAGCACTCCAGGGCTGGAATTTGTGCCAAGCCC
ATATTCCGTGGATTCGGATGTGGACGCCGGAACAGCGGTTACAGAACTCG
TCCCAGAAGAGGCACGCATCAGACCCATAAATCTCTTCCGCGTCCAAGAC
GGCTTCCCTCCGGGAACAACAGATGAAGAGATTGCAAGGTGGAGTCCTTA
CCGTGAACAAAGCTTTCTGCATTATTTGCGAAATGAGCGTGATCCAATCA
GTGGTGCTTGGAAGATAGCCCATGGATTTACTCCAATCGATTATTGAATG
CGTGCTCCTCCCTCCACCCATGCGAGGGATGCGGTAATTGGTCCCCTGAG
ATCGCGGCGGGGTTGCAAAACCTGCAAGGCCCGGAGAGTCAAGTGTGGAC
AGGAAAAGCCAAGCTGTCTTCGATGCAGCAAGACAGGCCGTAAGTGCGAG
TATGAAGGCCCAAATTTAGGCACGTTTTCCTCCACACCTGCGACACTTTC
AATTCTCGACAAGCCCCTGTCCTCGGCACCGGATACAGTCTGGAAGGAGC
GTCGCGCATTTGCCTACTACTTCCAACATATTGCCCTGTTTATCGGCGGG
GGTCTGGAAGTTGACTTCTGGAGTACCATCGTTCCGCAGATTTGCCGCAG
CGAACCCGCTGTGTGGGATGCCATCATCTCCCTGAGTACCCTGTTCGAAA
GCCCCGAGCCATGTCCAGACATAGCTTTTCTACGCCAGAGAGATGTCCTT
CTCCTTAACCAGTACCACCGAGACGCCATCAGCTGGTATTCCCGCTCAAT
GTCCCAAGTCCGTCAGCGACTAGAGCGCGGTGACGGGGATGTCTTGGTCG
GACTGGTAAGCTGTATACTCTTTATGTGCATTGAAGGTTTCCAGGGTGGT
GCGGCACAAGCTACTCGGCTTTACTGTCAAGGCGTGCAACTCATTGTCAC
CTTGCGTGGTCAGATCGCTTCCGGGGCCGTATCGTCATCGAAAGCTGCAT
GGTTGGAGGATATTATCGTTCCGATATTTATCCGTCTCGGGGCGACAGCG
CTCAATTTCTCCACTGTTCCAGTCGGCGCTTTACTACCCGATGTTCAGCA
TGTATTAACACAGGGGTTTACTTCCCTCAAATCGGCTCGCGAGGCAATTG
TTCTCTTACACACAGAGACTCAGCTTTTTCAGCGTATTTGCCTACCACAC
TTGCTGAAGTCCGATGGCTTCCAGCCACCTCCTGAGCTAGTCAATCAACG
ACTCGCTCTATTTGGTAGACTAAAGGTGTGGCACGCTGCGTTCACGGACT
TGATGGAAACCTTGCGCATGAAAGGGGCTTTATCACCGCAGCAAATAAGC
ACTGGCGCCCTTCTTCTCGCTTATCACGAGATGCTATACGTAACGATCGG
AACGTCCACATGTCAGTTGGAGACCGCAAACGACGCATACCTTCTGCAAT
TCCAGAACATAGTGGATCAGTCTAAGTTCGCGCTAGGTGCTTCGGCTCGA
TCAGACGGATCCCAACCTCCACTCACGCTTGAACTCGGTATCTCAATACC
CCTGTGGTTCACTAGTCTAAAATGCCGAGAACCCAAGCTTCGACAAACAG
CACTAAGCCTAGCAGGTCAAGCACCTGCAGTGCAGGCGTTCTATAAAGTG
AATACTGGGGCAAGGTGGTCACACACCATAATTACAATAGAAGAAGTGTG
CGCAGTGGCTATGAAGTCATCTGAAGGACTACCGGAGTCAACGAATCAAC
TCCAATACTCGCATTGTGAAGACTCTGGTATTAGCGTATTCGGTTCAGAT
CTTGGAAGTCAACCCAGCACTCCAGGGCTGGAATTTGTGCCAAGCCCATA
TTCCGTGGATTCGGATGTGGACGCCGGAACAGCGGTTACAGAACTCGTCC
CAGAAGAGGCACGCATCAGACCCATAAATCTCTTCCGCGTCCAAGACGGC
TTCCCTCCGGGAACAACAGATGAAGAGATTGCAAGGTGGAGTCCTTACCG
TGAACAAAGCTTTCTGCATTATTTGCGAAATGAGCGTGATCCAATCAGTG
GTGCTTGGAAGATAGCCCATGGATTTACTCCAATCGATTATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_186468ASPNIDRAFT_186468Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_186468-T1.exon1ASPNIDRAFT_186468-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_186468-T1.exon2ASPNIDRAFT_186468-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_186468-T1.cdsASPNIDRAFT_186468-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_186468-T1ASPNIDRAFT_186468-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:851393..853244 +
Powered by Drupal