|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000020.1:5203..6000- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_186883-T1 ID=ASPNIDRAFT_186883-T1|Name=ASPNIDRAFT_186883-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=798bp|location=Sequence derived from alignment at ACJE01000020.1:5203..6000- (Aspergillus niger ATCC 1015)
ATGACTTTATCCGGACAGGTTGTGGTCGTTGCTGGTGCATCCAAGGGCAT
TGGCAGAGCCATTGTCCTCCGCGCCGCCGCAGCGGGGGCTAGTGTGGTCA
TAAACTACATGTCCGACGTCAAGGGTGCTAACTCCCTGGTTGCGCAAGTC
GGTAGCGATCGTGCCTTTGCCGTGCGGGCGGATATTTCCAAGATCGCAGA
GATTGATGAACTCATAAAAGCGACGGTGGCTCGTTTCGGGAGGATCGATG
TCCTTATCCCCAATGCGGCCTATGTGCCCAGTAGCGACCTGCGAAATGTC
ACGGAGGAGGAATTTGAACTTGCCTTTGCTGTCAATGTCAAAGGGCCTTG
TTTCCTGGCGAAGGTTAGTACAGTCGACGATTTTGGATTCTGAGAGCGAC
GCTGATCCCACTTCTCGCAGAAAGCCTTGCCTTACATGCAACCAGGCAGT
AATATCATCTTTATCTCGACCGATCTTACCGACGCGTCTTCTGTGCCCGC
ACATTTCCTTCTTTACACATCGGCCAAGGCAGCTATGAACCAGATGGTCA
AGGTCCTAGCACGGGACCTTGCGCATATGGGAATCCGTGTCAATGCCATT
TCCCCAGGCGCAACAAGCACGGAATCTTTCCACCGAGCCCATGACGATAC
TAGGGCACAGATGATTGCGAGTCATAACCCGTTCAACCGGATTGGGGAGC
CGGATGAAATTGCCGCGGCGGTTAGTTTGCTGTGGGGAAAAGATAGCGTT
TGGATCTCAGGCCAAGTTTTGGGAGCGAACGGGGGTAGCGTTGTCTGA back to topCoding sequence (CDS) from alignment at ACJE01000020.1:5203..6000- >ASPNIDRAFT_186883-T1 ID=ASPNIDRAFT_186883-T1|Name=ASPNIDRAFT_186883-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1500bp|location=Sequence derived from alignment at ACJE01000020.1:5203..6000- (Aspergillus niger ATCC 1015)
AAAGCCTTGCCTTACATGCAACCAGGCAGTAATATCATCTTTATCTCGAC
CGATCTTACCGACGCGTCTTCTGTGCCCGCACATTTCCTTCTTTACACAT
CGGCCAAGGCAGCTATGAACCAGATGGTCAAGGTCCTAGCACGGGACCTT
GCGCATATGGGAATCCGTGTCAATGCCATTTCCCCAGGCGCAACAAGCAC
GGAATCTTTCCACCGAGCCCATGACGATACTAGGGCACAGATGATTGCGA
GTCATAACCCGTTCAACCGGATTGGGGAGCCGGATGAAATTGCCGCGGCG
GTTAGTTTGCTGTGGGGAAAAGATAGCGTTTGGATCTCAGGCCAAGTTTT
GGGAGCGAACGGGGGTAGCGTTGTCTGAATGACTTTATCCGGACAGGTTG
TGGTCGTTGCTGGTGCATCCAAGGGCATTGGCAGAGCCATTGTCCTCCGC
GCCGCCGCAGCGGGGGCTAGTGTGGTCATAAACTACATGTCCGACGTCAA
GGGTGCTAACTCCCTGGTTGCGCAAGTCGGTAGCGATCGTGCCTTTGCCG
TGCGGGCGGATATTTCCAAGATCGCAGAGATTGATGAACTCATAAAAGCG
ACGGTGGCTCGTTTCGGGAGGATCGATGTCCTTATCCCCAATGCGGCCTA
TGTGCCCAGTAGCGACCTGCGAAATGTCACGGAGGAGGAATTTGAACTTG
CCTTTGCTGTCAATGTCAAAGGGCCTTGTTTCCTGGCGAAGGTTAGTACA
AAAGCCTTGCCTTACATGCAACCAGGCAGTAATATCATCTTTATCTCGAC
CGATCTTACCGACGCGTCTTCTGTGCCCGCACATTTCCTTCTTTACACAT
CGGCCAAGGCAGCTATGAACCAGATGGTCAAGGTCCTAGCACGGGACCTT
GCGCATATGGGAATCCGTGTCAATGCCATTTCCCCAGGCGCAACAAGCAC
GGAATCTTTCCACCGAGCCCATGACGATACTAGGGCACAGATGATTGCGA
GTCATAACCCGTTCAACCGGATTGGGGAGCCGGATGAAATTGCCGCGGCG
GTTAGTTTGCTGTGGGGAAAAGATAGCGTTTGGATCTCAGGCCAAGTTTT
GGGAGCGAACGGGGGTAGCGTTGTCTGAATGACTTTATCCGGACAGGTTG
TGGTCGTTGCTGGTGCATCCAAGGGCATTGGCAGAGCCATTGTCCTCCGC
GCCGCCGCAGCGGGGGCTAGTGTGGTCATAAACTACATGTCCGACGTCAA
GGGTGCTAACTCCCTGGTTGCGCAAGTCGGTAGCGATCGTGCCTTTGCCG
TGCGGGCGGATATTTCCAAGATCGCAGAGATTGATGAACTCATAAAAGCG
ACGGTGGCTCGTTTCGGGAGGATCGATGTCCTTATCCCCAATGCGGCCTA
TGTGCCCAGTAGCGACCTGCGAAATGTCACGGAGGAGGAATTTGAACTTG
CCTTTGCTGTCAATGTCAAAGGGCCTTGTTTCCTGGCGAAGGTTAGTACA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000020.1 | supercontig | ACJE01000020.1:5203..6000 - |
|
